RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 DENND4CQ5VZ89 1909 aa3.14□□□□□ -1.91
CMSS1-204ENST00000479555 TRBV6-1A0A0K0K1D8 114 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 TRBV7-7A0A0K0K1E9 115 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 MYMXA0A1B0GTQ4 84 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 A0A1B0GUT8 65 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 C4orf51C9J302 202 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 F5H768 121 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 H0YIG0 161 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 K7EMI3 77 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 K7EQS6 105 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 DPM2O94777 84 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 IGKV1D-16P01601 117 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 IGLV1-44P01699 117 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 CT62P0C5K7 136 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 ACP1P24666 158 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 CD27P26842 260 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 KRTAP12-2P59991 146 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 UBE2L3P68036 154 aaKnown RBP3.13□□□□□ -1.91
CMSS1-204ENST00000479555 TFF3Q07654 80 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 PLGLAQ15195 96 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 MS4A18Q3C1V0 323 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 ALKBH6Q3KRA9 238 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 TMEM170BQ5T4T1 132 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 C9orf153Q5TBE3 101 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 TEX36Q5VZQ5 186 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 PLPP4Q5VZY2 271 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 ZNF493Q6ZR52 646 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 IL17RELQ6ZVW7 336 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 ORMDL3Q8N138 153 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 C3orf22Q8N5N4 141 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 DRAM1Q8N682 238 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 NFAM1Q8NET5 270 aaPredicted RBP3.13□□□□□ -1.91
CMSS1-204ENST00000479555 WFDC5Q8TCV5 224 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 SNRNP40Q96DI7 357 aaKnown RBP3.13□□□□□ -1.91
CMSS1-204ENST00000479555 ASCL2Q99929 193 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 HDHD3Q9BSH5 251 aaPredicted RBP3.13□□□□□ -1.91
CMSS1-204ENST00000479555 RNASE7Q9H1E1 156 aaKnown RBP3.13□□□□□ -1.91
CMSS1-204ENST00000479555 ZNF355PQ9NSJ1 428 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 RNF186Q9NXI6 227 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 PRO0628Q9UI54 55 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 AMMECR1Q9Y4X0 333 aaPredicted RBP3.13□□□□□ -1.91
CMSS1-204ENST00000479555 SELENOKQ9Y6D0 94 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 NOTCH2Q04721 2471 aa3.13□□□□□ -1.91
CMSS1-204ENST00000479555 COL4A6Q14031 1691 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 TRBV25-1A0A075B6N4 114 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 TRAV2A0A0B4J234 112 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 NDUFC2-KCTD14E9PQ53 114 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 H0YGG7 62 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 ATOX1O00244 68 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 PEX7O00628 323 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 SPINK4O60575 86 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 IGKV1-5P01602 117 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 TRACP01848 142 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 CRYGDP07320 174 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 P0C879 139 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 HLA-DMBP28068 263 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 CD52P31358 61 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 HSPE1P61604 102 aaKnown RBP3.12□□□□□ -1.91
CMSS1-204ENST00000479555 CACNG7P62955 275 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 FXYD3Q14802 87 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 ATXN8Q156A1 80 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 HES3Q5TGS1 186 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 FAM159AQ6UWV7 190 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 RPS19BP1Q86WX3 136 aaKnown RBP3.12□□□□□ -1.91
CMSS1-204ENST00000479555 ZNF843Q8N446 348 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 OR8A1Q8NGG7 326 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.12□□□□□ -1.91
CMSS1-204ENST00000479555 LINC00526Q96FQ7 95 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 TIMD4Q96H15 378 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 KIR2DL4Q99706 377 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 LAMTOR3Q9UHA4 124 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 PILRAQ9UKJ1 303 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 FZR1Q9UM11 496 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 ZNF256Q9Y2P7 627 aaPredicted RBP3.12□□□□□ -1.91
CMSS1-204ENST00000479555 INSIG2Q9Y5U4 225 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 CHCHD2Q9Y6H1 151 aaPredicted RBP3.12□□□□□ -1.91
CMSS1-204ENST00000479555 BPTFQ12830 3046 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 TRPM6Q9BX84 2022 aa3.12□□□□□ -1.91
CMSS1-204ENST00000479555 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.11□□□□□ -1.91
CMSS1-204ENST00000479555 IGKV1D-13A0A0B4J2D9 117 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 LINC01546A6NGU7 62 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 H3BT86 120 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 CCDC179H3BU77 68 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 IGLV2-8P01709 118 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 COX6CP09669 75 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 CECR9P0C854 216 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 IGKV1-13P0DP09 117 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 CRYGAP11844 174 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 RPL35AP18077 110 aaKnown RBP3.11□□□□□ -1.91
CMSS1-204ENST00000479555 PRTN3P24158 256 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 CNTFRP26992 372 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 GLRXP35754 106 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 FXYD2P54710 66 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 KRTAP10-8P60410 259 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 UBE2D3P61077 147 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 HERVK_113P61574 105 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 UBE2D2P62837 147 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 RPS21P63220 83 aaKnown RBP3.11□□□□□ -1.91
CMSS1-204ENST00000479555 PIGYQ3MUY2 71 aa3.11□□□□□ -1.91
CMSS1-204ENST00000479555 SPRNQ5BIV9 151 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms