RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 UBR4Q5T4S7 5183 aa10.9□□□□□ -0.66
DDX56-210ENST00000479440 IL18Q14116 193 aa10.89□□□□□ -0.67
DDX56-210ENST00000479440 MRPL23Q16540 153 aaKnown RBP10.89□□□□□ -0.67
DDX56-210ENST00000479440 PXDC1Q5TGL8 231 aa10.89□□□□□ -0.67
DDX56-210ENST00000479440 LYPD5Q6UWN5 251 aa10.89□□□□□ -0.67
DDX56-210ENST00000479440 BPIFA4PQ86YQ2 179 aa10.89□□□□□ -0.67
DDX56-210ENST00000479440 LRTM2Q8N967 370 aa10.89□□□□□ -0.67
DDX56-210ENST00000479440 C11orf72Q8NBR9 251 aa10.89□□□□□ -0.67
DDX56-210ENST00000479440 ST6GAL2Q96JF0 529 aa10.89□□□□□ -0.67
DDX56-210ENST00000479440 PXMP4Q9Y6I8 212 aa10.89□□□□□ -0.67
DDX56-210ENST00000479440 SRRM2Q9UQ35 2752 aaKnown RBP10.89□□□□□ -0.67
DDX56-210ENST00000479440 PRAC2D3DTV9 90 aa10.88□□□□□ -0.67
DDX56-210ENST00000479440 SLC25A5P05141 298 aaKnown RBP10.88□□□□□ -0.67
DDX56-210ENST00000479440 NEGR1Q7Z3B1 354 aa10.88□□□□□ -0.67
DDX56-210ENST00000479440 C10orf126Q8N4M7 172 aa10.88□□□□□ -0.67
DDX56-210ENST00000479440 ZBTB8BQ8NAP8 495 aaPredicted RBP10.88□□□□□ -0.67
DDX56-210ENST00000479440 ZNF431Q8TF32 576 aaPredicted RBP10.88□□□□□ -0.67
DDX56-210ENST00000479440 SLC17A3O00476 420 aa10.87□□□□□ -0.67
DDX56-210ENST00000479440 PSCAO43653 123 aa10.87□□□□□ -0.67
DDX56-210ENST00000479440 SPINK4O60575 86 aa10.87□□□□□ -0.67
DDX56-210ENST00000479440 CT45A10P0DMU9 189 aa10.87□□□□□ -0.67
DDX56-210ENST00000479440 VAMP1P23763 118 aa10.87□□□□□ -0.67
DDX56-210ENST00000479440 ANXA2RQ3ZCQ2 193 aa10.87□□□□□ -0.67
DDX56-210ENST00000479440 TMEM128Q5BJH2 165 aa10.87□□□□□ -0.67
DDX56-210ENST00000479440 LINC00305Q7Z4B0 112 aa10.87□□□□□ -0.67
DDX56-210ENST00000479440 EIF4E3Q8N5X7 224 aaKnown RBP10.87□□□□□ -0.67
DDX56-210ENST00000479440 HMCN2Q8NDA2 5059 aa10.87□□□□□ -0.67
DDX56-210ENST00000479440 LINC00854A0A1B0GVQ3 168 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 C7orf71A4D174 169 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 K7EPK0 472 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 IGHV3-53P01767 116 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 SNRPCP09234 159 aaKnown RBP10.86□□□□□ -0.67
DDX56-210ENST00000479440 CRYBA4P53673 196 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 TCL1AP56279 114 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 TEPPQ6URK8 271 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 PATE2Q6UY27 113 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 ZNF546Q86UE3 836 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 WFDC10BQ8IUB3 73 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 DEFB104AQ8WTQ1 72 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 VGLL1Q99990 258 aa10.86□□□□□ -0.67
DDX56-210ENST00000479440 FNDC10F2Z333 226 aa10.85□□□□□ -0.67
DDX56-210ENST00000479440 SRIP30626 198 aa10.85□□□□□ -0.67
DDX56-210ENST00000479440 FAUP35544 74 aaKnown RBP10.85□□□□□ -0.67
DDX56-210ENST00000479440 RRAS2P62070 204 aaPredicted RBP10.85□□□□□ -0.67
DDX56-210ENST00000479440 SLC38A11Q08AI6 406 aa10.85□□□□□ -0.67
DDX56-210ENST00000479440 CTF1Q16619 201 aa10.85□□□□□ -0.67
DDX56-210ENST00000479440 IBA57Q5T440 356 aaKnown RBP10.85□□□□□ -0.67
DDX56-210ENST00000479440 PCNPQ8WW12 178 aaKnown RBP10.85□□□□□ -0.67
DDX56-210ENST00000479440 NPVFQ9HCQ7 196 aa10.85□□□□□ -0.67
DDX56-210ENST00000479440 PSENENQ9NZ42 101 aa10.85□□□□□ -0.67
DDX56-210ENST00000479440 MGAT4CQ9UBM8 478 aa10.85□□□□□ -0.67
DDX56-210ENST00000479440 HHLA3Q9XRX5 114 aa10.85□□□□□ -0.67
DDX56-210ENST00000479440 H3BTX0 84 aa10.84□□□□□ -0.67
DDX56-210ENST00000479440 COX7A2P2O60397 106 aa10.84□□□□□ -0.67
DDX56-210ENST00000479440 CRYGDP07320 174 aa10.84□□□□□ -0.67
DDX56-210ENST00000479440 C4orf46Q504U0 113 aa10.84□□□□□ -0.67
DDX56-210ENST00000479440 DIRAS2Q96HU8 199 aa10.84□□□□□ -0.67
DDX56-210ENST00000479440 C8orf49Q96NF6 230 aa10.84□□□□□ -0.67
DDX56-210ENST00000479440 NAA50Q9GZZ1 169 aaKnown RBP10.84□□□□□ -0.67
DDX56-210ENST00000479440 MRPL16Q9NX20 251 aaKnown RBP10.84□□□□□ -0.67
DDX56-210ENST00000479440 KLF12Q9Y4X4 402 aa10.84□□□□□ -0.67
DDX56-210ENST00000479440 CTDSP2O14595 271 aa10.83□□□□□ -0.68
DDX56-210ENST00000479440 GOSR2O14653 212 aa10.83□□□□□ -0.68
DDX56-210ENST00000479440 C1QBP02746 253 aa10.83□□□□□ -0.68
DDX56-210ENST00000479440 HOXB5P09067 269 aa10.83□□□□□ -0.68
DDX56-210ENST00000479440 IGLC2P0DOY2 106 aa10.83□□□□□ -0.68
DDX56-210ENST00000479440 GUK1Q16774 197 aa10.83□□□□□ -0.68
DDX56-210ENST00000479440 Q8N814 137 aa10.83□□□□□ -0.68
DDX56-210ENST00000479440 CCDC59Q9P031 241 aaKnown RBP10.83□□□□□ -0.68
DDX56-210ENST00000479440 RSL24D1Q9UHA3 163 aaKnown RBP10.83□□□□□ -0.68
DDX56-210ENST00000479440 TRAV5A0A0B4J249 113 aa10.82□□□□□ -0.68
DDX56-210ENST00000479440 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
DDX56-210ENST00000479440 KLLNB2CW77 178 aa10.82□□□□□ -0.68
DDX56-210ENST00000479440 PRAF2O60831 178 aa10.82□□□□□ -0.68
DDX56-210ENST00000479440 SFT2D2O95562 160 aa10.82□□□□□ -0.68
DDX56-210ENST00000479440 POLR2GP62487 172 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDX56-210ENST00000479440 BTN1A1Q13410 526 aa10.82□□□□□ -0.68
DDX56-210ENST00000479440 LINC00528Q8N1L1 170 aa10.82□□□□□ -0.68
DDX56-210ENST00000479440 OR10P1Q8NGE3 313 aa10.82□□□□□ -0.68
DDX56-210ENST00000479440 MRPL53Q96EL3 112 aaKnown RBP10.82□□□□□ -0.68
DDX56-210ENST00000479440 SAT2Q96F10 170 aaPredicted RBP10.82□□□□□ -0.68
DDX56-210ENST00000479440 ARPC5LQ9BPX5 153 aa10.82□□□□□ -0.68
DDX56-210ENST00000479440 TRGV4A0A0C4DH28 118 aa10.81□□□□□ -0.68
DDX56-210ENST00000479440 K7EQD1 137 aa10.81□□□□□ -0.68
DDX56-210ENST00000479440 RGS13O14921 159 aa10.81□□□□□ -0.68
DDX56-210ENST00000479440 MPDU1O75352 247 aa10.81□□□□□ -0.68
DDX56-210ENST00000479440 OPCMLQ14982 345 aa10.81□□□□□ -0.68
DDX56-210ENST00000479440 E5RGE8 158 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 SSSCA1O60232 199 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 ZNF253O75346 499 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 ORM1P02763 201 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 OR4E1P0C645 316 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 METTL15P1P0C7V9 234 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 ID3Q02535 119 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 FHL2Q14192 279 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 C10orf113Q5VZT2 155 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 TXNDC17Q9BRA2 123 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 MRPL32Q9BYC8 188 aaKnown RBP10.8□□□□□ -0.68
DDX56-210ENST00000479440 FAM30AQ9NZY2 134 aa10.8□□□□□ -0.68
DDX56-210ENST00000479440 PLA2G2DQ9UNK4 145 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms