RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 DUX4L9Q6RFH8 374 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CLEC19AQ6UXS0 136 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 HEPN1Q6WQI6 88 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 C12orf54Q6X4T0 127 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ASCL4Q6XD76 172 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 BRD3OSQ6XYD6 125 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 Q6ZR03 302 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SSX7Q7RTT5 188 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 VMO1Q7Z5L0 202 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SLC35E3Q7Z769 313 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PRNTQ86SH4 94 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 BAGE3Q86Y29 109 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 BAGE2Q86Y30 109 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PDPNQ86YL7 162 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 H1FOOQ8IZA3 346 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 OR8I2Q8N0Y5 310 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SVBPQ8N300 66 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 C6orf223Q8N319 242 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 TCTEX1D1Q8N7M0 179 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 LFNGQ8NES3 379 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 OR10W1Q8NGF6 305 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 OR4P4Q8NGL7 312 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 OR4C13Q8NGP0 309 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 OR4A5Q8NH83 315 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 LYPD6BQ8NI32 183 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 VSTM2AQ8TAG5 236 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 DYNLRB2Q8TF09 96 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 Q8WTZ3 238 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 LSM10Q969L4 123 aaKnown RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 FAM104AQ969W3 186 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 EEF1AKMT3Q96AZ1 226 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SMIM8Q96KF7 97 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 LINC00052Q96N35 136 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 GAFA1Q96PS6 74 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 YPEL2Q96QA6 119 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 OR2A7Q96R45 310 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 OR4C12Q96R67 309 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PFDN5Q99471 154 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 P2RX4Q99571 388 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 NDFIP1Q9BT67 221 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 RSG1Q9BU20 258 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 C19orf24Q9BVV8 132 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SAMD10Q9BYL1 202 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 NKX6-2Q9C056 277 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MAP1LC3BQ9GZQ8 125 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 WDR61Q9GZS3 305 aaKnown RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SLC35B3Q9H1N7 401 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SH3BGRL3Q9H299 93 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 TMEM133Q9H2Q1 129 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 FBXL15Q9H469 300 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNF331Q9NQX6 463 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 BIN3Q9NQY0 253 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MMP26Q9NRE1 261 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SMCO4Q9NRQ5 59 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNRD1Q9P1U0 126 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 VAX2Q9UIW0 290 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 NAGKQ9UJ70 344 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 LINC00527Q9UJ94 153 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 RPUSD1Q9UJJ7 312 aaKnown RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 JPT1Q9UK76 154 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 TNFSF18Q9UNG2 199 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 HIGD1AQ9Y241 93 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PRELID1Q9Y255 219 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 GOLT1BQ9Y3E0 138 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 KPTNQ9Y664 436 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PXMP4Q9Y6I8 212 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.89□□□□□ -2.274e-9■■■■■ 34.7
SRRM1-211ENST00000478890 PLCE1Q9P212 2302 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MED13LQ71F56 2210 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 KIAA2026Q5HYC2 2103 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZGRF1Q86YA3 2104 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 TEX15Q9BXT5 2789 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 DOCK10Q96BY6 2186 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MGAQ8IWI9 3026 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 YLPM1P49750 1951 aaKnown RBP0.88□□□□□ -2.27
SRRM1-211ENST00000478890 TNRC6AQ8NDV7 1962 aaKnown RBP0.88□□□□□ -2.27
SRRM1-211ENST00000478890 USP24Q9UPU5 2620 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 SONP18583 2426 aaKnown RBP0.88□□□□□ -2.27
SRRM1-211ENST00000478890 CFAP54Q96N23 3096 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 REV3LO60673 3130 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 TRAV30A0A087WSZ9 112 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 TMSB15BA0A087X1C1 80 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 TRAV14DV4A0A0A6YYC5 116 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 IGHV2-26A0A0B4J1V2 119 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 TRAV3A0A0B4J244 114 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 TRAV41A0A0B4J266 112 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 TRAV40A0A0B4J280 105 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 IGHV1-69DA0A0B4J2H0 117 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 IGHV1-3A0A0C4DH29 117 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 IGKV1-6A0A0C4DH72 117 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 A0A0G2JLM5 398 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 CTXND1A0A1B0GTU2 59 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 TCRBV4S1A1TA0A5B7 111 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 TMEM218A2RU14 115 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 C7orf77A4D0Y5 90 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 RAB19A4D1S5 217 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 LINC00862A6NCI5 91 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 PGPA6NDG6 321 aa0.88□□□□□ -2.27
SRRM1-211ENST00000478890 OR2T8A6NH00 312 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms