RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 TMEM133Q9H2Q1 129 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 RNF122Q9H9V4 155 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 XAGE1AQ9HD64 81 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 OSTCQ9NRP0 149 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 IL36BQ9NZH7 164 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 EPDR1Q9UM22 224 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 RPL26L1Q9UNX3 145 aaKnown RBP0.95□□□□□ -2.26
NPHP3-207ENST00000476742 COQ4Q9Y3A0 265 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 HLA-DRB4X5D2U9 266 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 MYH9P35579 1960 aaKnown RBP0.95□□□□□ -2.26
NPHP3-207ENST00000476742 TRAPPC8Q9Y2L5 1435 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 NCKAP5O14513 1909 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 KDM5CP41229 1560 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 BAZ1AQ9NRL2 1556 aaPredicted RBP0.95□□□□□ -2.26
NPHP3-207ENST00000476742 PLXND1Q9Y4D7 1925 aa0.95□□□□□ -2.26
NPHP3-207ENST00000476742 ZNF106Q9H2Y7 1883 aaKnown RBP0.95□□□□□ -2.26
NPHP3-207ENST00000476742 ARHGEF11O15085 1522 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 XIRP1Q702N8 1843 aaKnown RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 CAMSAP2Q08AD1 1489 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 TCOF1Q13428 1488 aaKnown RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 TRAV12-2A0A075B6T6 113 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 FAM236AA0A1B0GUQ0 79 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 FAM236BA0A1B0GV22 79 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 ODAMA1E959 279 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 GRIFINA4D1Z8 144 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 ZNF727A8MUV8 499 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 ZNF736B4DX44 427 aaPredicted RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 MCRIP1C9JLW8 97 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 F8W1H4 67 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 H3BT86 120 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 TMEM256-PLSCR3K7ERE1 68 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 PDCD5O14737 125 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 LYRM1O43325 122 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 NDUFB2O95178 105 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 MPC2O95563 127 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 TCL1BO95988 128 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 GYPAP02724 150 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 C1QAP02745 245 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 CTSDP07339 412 aaPredicted RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 RPL27AP46776 148 aaKnown RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 DAPP51397 102 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 INSL3P51460 131 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 ZNF80P51504 273 aaPredicted RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 DYNLT3P51808 116 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 POLR2JP52435 117 aaKnown RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 ARPP19P56211 112 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 LINC00313P59037 77 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 DCDP81605 110 aaKnown RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 QRFPP83859 136 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 ZNF117Q03924 483 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 BSPH1Q075Z2 132 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 KLRD1Q13241 179 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 CDK5R1Q15078 307 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 ADIRFQ15847 76 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 LGALS9BQ3B8N2 356 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 TMEM155Q4W5P6 130 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 LINC01554Q52M75 96 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 KHDC3LQ587J8 217 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 PYY3Q5JQD4 70 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 TMEM91Q6ZNR0 172 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 SDIM1Q6ZPB5 146 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 MIR17HGQ75NE6 70 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 PHF5AQ7RTV0 110 aaKnown RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 AAED1Q7RTV5 226 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 TEN1Q86WV5 123 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 GPHB5Q86YW7 130 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 HIST3H2BBQ8N257 126 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 C10orf111Q8N326 155 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 RPP25LQ8N5L8 163 aaKnown RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 OR5AK2Q8NH90 309 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 STAG3L4Q8TBR4 150 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 SCGB3A1Q96QR1 104 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 SDF2Q99470 211 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 HIST1H2BLQ99880 126 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 NAA38Q9BRA0 125 aaKnown RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 AGPAT4-IT1Q9H0P7 198 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 SMDT1Q9H4I9 107 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 SMCO4Q9NRQ5 59 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 RABAC1Q9UI14 185 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 RNF11Q9Y3C5 154 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 CHCHD2Q9Y6H1 151 aaPredicted RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 PLCH2O75038 1416 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 CLIP1P30622 1438 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 EEA1Q15075 1411 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 NUP210Q8TEM1 1887 aaPredicted RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 DOCK10Q96BY6 2186 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 MAPKBP1O60336 1514 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 MYO15BQ96JP2 1530 aa0.94□□□□□ -2.26
NPHP3-207ENST00000476742 ZNF638Q14966 1978 aaKnown RBP0.94□□□□□ -2.26
NPHP3-207ENST00000476742 COL18A1P39060 1754 aa0.93□□□□□ -2.26
NPHP3-207ENST00000476742 DNMT1P26358 1616 aaKnown RBP0.93□□□□□ -2.26
NPHP3-207ENST00000476742 MYOM2P54296 1465 aa0.93□□□□□ -2.26
NPHP3-207ENST00000476742 GRIN2AQ12879 1464 aa0.93□□□□□ -2.26
NPHP3-207ENST00000476742 MAGI1Q96QZ7 1491 aaPredicted RBP0.93□□□□□ -2.26
NPHP3-207ENST00000476742 ARHGAP35Q9NRY4 1499 aa0.93□□□□□ -2.26
NPHP3-207ENST00000476742 DSPPQ9NZW4 1301 aa0.93□□□□□ -2.26
NPHP3-207ENST00000476742 FANCMQ8IYD8 2048 aa0.93□□□□□ -2.26
NPHP3-207ENST00000476742 KDM6AO15550 1401 aaPredicted RBP0.93□□□□□ -2.26
NPHP3-207ENST00000476742 MYOM3Q5VTT5 1437 aa0.93□□□□□ -2.26
NPHP3-207ENST00000476742 PRG4Q92954 1404 aaPredicted RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms