RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CXCL1P09341 107 aa13.39□□□□□ -0.27
HSPG2-208ENST00000471322 CITED1Q99966 193 aa13.39□□□□□ -0.27
HSPG2-208ENST00000471322 PYGO2Q9BRQ0 406 aa13.39□□□□□ -0.27
HSPG2-208ENST00000471322 PEF1Q9UBV8 284 aaKnown RBP13.39□□□□□ -0.27
HSPG2-208ENST00000471322 IGHV3OR16-8A0A075B7F1 116 aa13.39□□□□□ -0.27
HSPG2-208ENST00000471322 ZNF785A8K8V0 405 aa13.39□□□□□ -0.27
HSPG2-208ENST00000471322 MGST1P10620 155 aaKnown RBP13.39□□□□□ -0.27
HSPG2-208ENST00000471322 RPS10P46783 165 aaKnown RBP13.39□□□□□ -0.27
HSPG2-208ENST00000471322 RPH3ALQ9UNE2 315 aa13.39□□□□□ -0.27
HSPG2-208ENST00000471322 NBEAL1Q6ZS30 2694 aa13.38□□□□□ -0.27
HSPG2-208ENST00000471322 SMAD5-AS1Q9Y6J3 95 aa13.38□□□□□ -0.27
HSPG2-208ENST00000471322 WNK1Q9H4A3 2382 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 A0A1W2PS18 150 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 FBLL1A6NHQ2 334 aaKnown RBP13.37□□□□□ -0.27
HSPG2-208ENST00000471322 SLC17A3O00476 420 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 LTAP01374 205 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 TRBV12-3P01733 135 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 CD28P10747 220 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 OR5I1Q13606 314 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 GOLT1AQ6ZVE7 132 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 FAM231DQ6ZW35 169 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 RNF152Q8N8N0 203 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 TMEM75Q8N9X5 138 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 GRAMD2BQ96HH9 432 aa13.37□□□□□ -0.27
HSPG2-208ENST00000471322 TRAV9-1A0A075B6T8 112 aa13.36□□□□□ -0.27
HSPG2-208ENST00000471322 FAM106AQ4KMX7 169 aa13.36□□□□□ -0.27
HSPG2-208ENST00000471322 SLC50A1Q9BRV3 221 aa13.36□□□□□ -0.27
HSPG2-208ENST00000471322 IL36BQ9NZH7 164 aa13.36□□□□□ -0.27
HSPG2-208ENST00000471322 MGAM2Q2M2H8 2515 aa13.36□□□□□ -0.27
HSPG2-208ENST00000471322 DIRC3C9JPN6 131 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 IBA57Q5T440 356 aaKnown RBP13.35□□□□□ -0.27
HSPG2-208ENST00000471322 C16orf54Q6UWD8 224 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 LCNL1Q6ZST4 164 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 GPHB5Q86YW7 130 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 MYOZ3Q8TDC0 251 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 MLST8Q9BVC4 326 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 CLEC5AQ9NY25 188 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 ZFP30Q9Y2G7 519 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 CMYA5Q8N3K9 4069 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 K7EMT4 169 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 UBE2E2Q96LR5 201 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 SRD5A3Q9H8P0 318 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 ZNF331Q9NQX6 463 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-208ENST00000471322 V9GYV3 84 aa13.35□□□□□ -0.27
HSPG2-208ENST00000471322 LOC105371267A0A1B0GV96 52 aa13.34□□□□□ -0.27
HSPG2-208ENST00000471322 A0A1W2PPQ1 181 aa13.34□□□□□ -0.27
HSPG2-208ENST00000471322 ZNF207O43670 478 aaKnown RBP13.34□□□□□ -0.27
HSPG2-208ENST00000471322 APOHP02749 345 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-208ENST00000471322 TYMSP04818 313 aa13.34□□□□□ -0.27
HSPG2-208ENST00000471322 RPL19P84098 196 aaKnown RBP13.34□□□□□ -0.27
HSPG2-208ENST00000471322 PSG3Q16557 428 aa13.34□□□□□ -0.27
HSPG2-208ENST00000471322 RPEL1Q2QD12 228 aa13.34□□□□□ -0.27
HSPG2-208ENST00000471322 Q86TA4 180 aa13.34□□□□□ -0.27
HSPG2-208ENST00000471322 TMEM183AQ8IXX5 376 aa13.34□□□□□ -0.27
HSPG2-208ENST00000471322 WIPF2Q8TF74 440 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-208ENST00000471322 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-208ENST00000471322 A0A1W2PRX2 142 aa13.33□□□□□ -0.28
HSPG2-208ENST00000471322 ZNF320A2RRD8 509 aa13.33□□□□□ -0.28
HSPG2-208ENST00000471322 IGLV2-11P01706 119 aa13.33□□□□□ -0.28
HSPG2-208ENST00000471322 RPLP1P05386 114 aaKnown RBP13.33□□□□□ -0.28
HSPG2-208ENST00000471322 NSUN5P1Q3KNT7 163 aa13.33□□□□□ -0.28
HSPG2-208ENST00000471322 UNQ9165/PRO28630Q6UXU0 137 aa13.33□□□□□ -0.28
HSPG2-208ENST00000471322 NHLRC2Q8NBF2 726 aa13.33□□□□□ -0.28
HSPG2-208ENST00000471322 RNASE7Q9H1E1 156 aaKnown RBP13.33□□□□□ -0.28
HSPG2-208ENST00000471322 IGHV3-66A0A0C4DH42 116 aa13.32□□□□□ -0.28
HSPG2-208ENST00000471322 LGALS1P09382 135 aaKnown RBP13.32□□□□□ -0.28
HSPG2-208ENST00000471322 FAM3BP58499 235 aaPredicted RBP13.32□□□□□ -0.28
HSPG2-208ENST00000471322 TCTEX1D4Q5JR98 221 aa13.32□□□□□ -0.28
HSPG2-208ENST00000471322 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.32□□□□□ -0.28
HSPG2-208ENST00000471322 GLMPQ8WWB7 406 aa13.32□□□□□ -0.28
HSPG2-208ENST00000471322 SGK494Q96LW2 274 aa13.32□□□□□ -0.28
HSPG2-208ENST00000471322 DAZ1Q9NQZ3 744 aaKnown RBP13.32□□□□□ -0.28
HSPG2-208ENST00000471322 ZNF492Q9P255 531 aa13.32□□□□□ -0.28
HSPG2-208ENST00000471322 PSG8Q9UQ74 426 aa13.32□□□□□ -0.28
HSPG2-208ENST00000471322 UFC1Q9Y3C8 167 aa13.32□□□□□ -0.28
HSPG2-208ENST00000471322 ZNF705GA8MUZ8 300 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-208ENST00000471322 M0R3E3 92 aa13.31□□□□□ -0.28
HSPG2-208ENST00000471322 GATCO43716 136 aaKnown RBP13.31□□□□□ -0.28
HSPG2-208ENST00000471322 BMI1P35226 326 aa13.31□□□□□ -0.28
HSPG2-208ENST00000471322 KHDC1LQ5JSQ8 128 aa13.31□□□□□ -0.28
HSPG2-208ENST00000471322 PRNTQ86SH4 94 aa13.31□□□□□ -0.28
HSPG2-208ENST00000471322 IGHV3OR16-13A0A075B7E8 117 aa13.31□□□□□ -0.28
HSPG2-208ENST00000471322 IGHV3-49A0A0A0MS15 119 aa13.31□□□□□ -0.28
HSPG2-208ENST00000471322 IGHV3-74A0A0B4J1X5 117 aa13.31□□□□□ -0.28
HSPG2-208ENST00000471322 MRPL53Q96EL3 112 aaKnown RBP13.31□□□□□ -0.28
HSPG2-208ENST00000471322 DAZAP1Q96EP5 407 aaKnown RBP13.31□□□□□ -0.28
HSPG2-208ENST00000471322 TRAV8-1A0A0A6YYK1 113 aa13.3□□□□□ -0.28
HSPG2-208ENST00000471322 IGHV7-4-1A0A0J9YVY3 117 aa13.3□□□□□ -0.28
HSPG2-208ENST00000471322 LCN12Q6JVE5 192 aa13.3□□□□□ -0.28
HSPG2-208ENST00000471322 ZFP82Q8N141 532 aa13.3□□□□□ -0.28
HSPG2-208ENST00000471322 NUDT10Q8NFP7 164 aa13.3□□□□□ -0.28
HSPG2-208ENST00000471322 NUDT11Q96G61 164 aa13.3□□□□□ -0.28
HSPG2-208ENST00000471322 CHEK1O14757 476 aa13.29□□□□□ -0.28
HSPG2-208ENST00000471322 S100A6P06703 90 aa13.29□□□□□ -0.28
HSPG2-208ENST00000471322 SAPCD1Q5SSQ6 148 aa13.29□□□□□ -0.28
HSPG2-208ENST00000471322 PRR27Q6MZM9 219 aa13.29□□□□□ -0.28
HSPG2-208ENST00000471322 FBN3Q75N90 2809 aa13.29□□□□□ -0.28
HSPG2-208ENST00000471322 SMIM27A0A1W2PRY6 76 aa13.28□□□□□ -0.28
HSPG2-208ENST00000471322 RBAKDNA6NC62 111 aa13.28□□□□□ -0.28
HSPG2-208ENST00000471322 TRGC2P03986 189 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms