RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 F2RL2O00254 374 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 GUSBP1Q15486 140 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 FAM71F2Q6NXP2 309 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 PET117Q6UWS5 81 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 SLC25A39Q9BZJ4 359 aaPredicted RBP8.58□□□□□ -1.04
CHD3-208ENST00000470531 ASH1LQ9NR48 2969 aaKnown RBP8.58□□□□□ -1.04
CHD3-208ENST00000470531 JKAMPQ9P055 326 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 PSG8Q9UQ74 426 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 IGHV3-11P01762 117 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 OR10J3Q5JRS4 329 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 RNASE6Q93091 150 aaKnown RBP8.58□□□□□ -1.04
CHD3-208ENST00000470531 PKD1L2Q7Z442 2459 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 A0A0G2JNJ9 132 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 TRBV7-9A0A0J9YWB2 115 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 FABP2P12104 132 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 KHDC1LQ5JSQ8 128 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 GDF5OSQ5U4N7 250 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 LYZL1Q6UWQ5 148 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 C1orf159Q96HA4 380 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 Q9UFV3 132 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 FAM215AQ9Y5M1 114 aa8.58□□□□□ -1.04
CHD3-208ENST00000470531 FN1P02751 2386 aaKnown RBP8.58□□□□□ -1.04
CHD3-208ENST00000470531 GAGE12HA6NDE8 117 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 GRNP28799 593 aaKnown RBP8.57□□□□□ -1.04
CHD3-208ENST00000470531 EMP1P54849 157 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 RUSC1-AS1Q66K80 236 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 ZNF414Q96IQ9 312 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 FAM231BA6NCW3 169 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 NDUFA3O95167 84 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 ERCC8Q13216 396 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 SCGB1D4Q6XE38 83 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 RNF182Q8N6D2 247 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 C19orf24Q9BVV8 132 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 AKAP13Q12802 2813 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 IGHV1-24A0A0C4DH33 117 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 MEF2CQ06413 473 aaPredicted RBP8.57□□□□□ -1.04
CHD3-208ENST00000470531 SEM1Q6ZVN7 128 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 TMEM219Q86XT9 240 aa8.57□□□□□ -1.04
CHD3-208ENST00000470531 A6NDN8 102 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 G3V4G9 280 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 IGHV1-8P0DP01 117 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 RPL7P18124 248 aaKnown RBP8.56□□□□□ -1.04
CHD3-208ENST00000470531 FAM162BQ5T6X4 162 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 C1orf162Q8NEQ5 155 aaPredicted RBP8.56□□□□□ -1.04
CHD3-208ENST00000470531 RNF125Q96EQ8 232 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 FOXC2Q99958 501 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 NDUFA4L2Q9NRX3 87 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 MRPS16Q9Y3D3 137 aaKnown RBP8.56□□□□□ -1.04
CHD3-208ENST00000470531 GTSCR1Q86UQ5 136 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 NHP2Q9NX24 153 aaKnown RBP8.56□□□□□ -1.04
CHD3-208ENST00000470531 IGHV2-26A0A0B4J1V2 119 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 LOC107984156A0A0G2JMH3 177 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 TMEM178BH3BS89 294 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 ATP5J2P56134 94 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 TMPRSS3P57727 454 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 TMEM249Q2WGJ8 235 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 CLEC19AQ6UXS0 136 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 ARL17AQ8IVW1 177 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 CTSZQ9UBR2 303 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 RABAC1Q9UI14 185 aa8.56□□□□□ -1.04
CHD3-208ENST00000470531 H3BVH4 76 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 FAM106CPP0CH98 169 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 FAM106AQ4KMX7 169 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 CCDC144NLQ6NUI1 221 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 FXYD5Q96DB9 178 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 PIMREGQ9BSJ6 248 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 TEX48A0A1B0GUV7 120 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 FAM74A4Q5TZK3 123 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 JMJD1CQ15652 2540 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 BCL6BQ8N143 479 aaPredicted RBP8.55□□□□□ -1.04
CHD3-208ENST00000470531 PRSS33Q8NF86 280 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 SIGLEC9Q9Y336 463 aa8.55□□□□□ -1.04
CHD3-208ENST00000470531 IGHV1-3A0A0C4DH29 117 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 NDUFS7O75251 213 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 SPINK8P0C7L1 97 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 GATA1P15976 413 aaPredicted RBP8.54□□□□□ -1.04
CHD3-208ENST00000470531 EIF4EBP1Q13541 118 aaPredicted RBP8.54□□□□□ -1.04
CHD3-208ENST00000470531 FAM169BQ8N8A8 192 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.54□□□□□ -1.04
CHD3-208ENST00000470531 SPENQ96T58 3664 aaKnown RBP8.54□□□□□ -1.04
CHD3-208ENST00000470531 IGLV3-9A0A075B6K5 115 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 TRAV26-2A0A0B4J265 109 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 IGLC7A0M8Q6 106 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 A1L4Q6 167 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
CHD3-208ENST00000470531 GTSF1Q8WW33 167 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 MSRB1Q9NZV6 116 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 LEPP41159 167 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 FAM167A-AS1Q96KT0 104 aa8.54□□□□□ -1.04
CHD3-208ENST00000470531 B9A039 149 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 TM4SF5O14894 197 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 IGHG3P01860 377 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 C8orf46Q8TAG6 207 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 VCX2Q9H322 139 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 TAX1BP3O14907 124 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 SCGB1C2P0DMR2 95 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 MFAP4P55083 255 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms