RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 E7EUB6 86 aa1.97□□□□□ -2.09
TTC3-213ENST00000469939 TCRAP04437 139 aa1.97□□□□□ -2.09
TTC3-213ENST00000469939 SLC25A5P05141 298 aaKnown RBP1.97□□□□□ -2.09
TTC3-213ENST00000469939 EVI2AP22794 236 aa1.97□□□□□ -2.09
TTC3-213ENST00000469939 MRPS36P82909 103 aaKnown RBP1.97□□□□□ -2.09
TTC3-213ENST00000469939 CDK6Q00534 326 aa1.97□□□□□ -2.09
TTC3-213ENST00000469939 HSD17B12Q53GQ0 312 aa1.97□□□□□ -2.09
TTC3-213ENST00000469939 GLYATL3Q5SZD4 288 aa1.97□□□□□ -2.09
TTC3-213ENST00000469939 FP248Q71RG6 208 aaPredicted RBP1.97□□□□□ -2.09
TTC3-213ENST00000469939 TSTD1Q8NFU3 115 aa1.97□□□□□ -2.09
TTC3-213ENST00000469939 MUCL1Q96DR8 90 aa1.97□□□□□ -2.09
TTC3-213ENST00000469939 GGACTQ9BVM4 153 aa1.97□□□□□ -2.09
TTC3-213ENST00000469939 CALML5Q9NZT1 146 aa1.97□□□□□ -2.09
TTC3-213ENST00000469939 CHCHD2Q9Y6H1 151 aaPredicted RBP1.97□□□□□ -2.09
TTC3-213ENST00000469939 TRAV14DV4A0A0A6YYC5 116 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 TCRBV4S1A1TA0A5B7 111 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 EFCAB10A6NFE3 127 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 C5orf58C9J3I9 102 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 TPT1P13693 172 aaKnown RBP1.96□□□□□ -2.1
TTC3-213ENST00000469939 BRS3P32247 399 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 SPCS2Q15005 226 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 ARPINQ7Z6K5 226 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 COA5Q86WW8 74 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 CLECL1Q8IZS7 167 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 OR4S1Q8NGB4 309 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 CLEC2BQ92478 149 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 Q96M85 177 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 OR4C12Q96R67 309 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 CGREF1Q99674 301 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 BANF2Q9H503 90 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 FKBP11Q9NYL4 201 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 TPRKBQ9Y3C4 175 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 IBTKQ9P2D0 1353 aaPredicted RBP1.96□□□□□ -2.1
TTC3-213ENST00000469939 PCDH15Q96QU1 1955 aa1.96□□□□□ -2.1
TTC3-213ENST00000469939 MYLKQ15746 1914 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 CCDC171Q6TFL3 1326 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 OVOS2A0A0J9YW53 1432 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 OVOS2Q6IE36 1432 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 A0A087WSZ3 146 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 TRAV27A0A087WT01 109 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 A0A096LPI6 279 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 TRAV10A0A0B4J240 114 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 UQCRQO14949 82 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 HBDP02042 147 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 QRFPP83859 136 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 C1orf137Q5JT78 98 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 TMEM106BQ9NUM4 274 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 PAIP2BQ9ULR5 123 aaKnown RBP1.95□□□□□ -2.1
TTC3-213ENST00000469939 SCN3AQ9NY46 2000 aa1.95□□□□□ -2.1
TTC3-213ENST00000469939 GBF1Q92538 1859 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 CDK5RAP2Q96SN8 1893 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 KIAA1549Q9HCM3 1950 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 BAHCC1Q9P281 2608 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.94□□□□□ -2.1
TTC3-213ENST00000469939 ZNF727A8MUV8 499 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 C5orf67F2Z3F1 127 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 M0R2Z0 102 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 RNASE3P12724 160 aaKnown RBP1.94□□□□□ -2.1
TTC3-213ENST00000469939 DIAPH2-AS1Q14236 149 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 C10orf55Q5SWW7 151 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 HAGHLQ6PII5 290 aaPredicted RBP1.94□□□□□ -2.1
TTC3-213ENST00000469939 Q8TAT8 98 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 PSMF1Q92530 271 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 VPS25Q9BRG1 176 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 SOX21Q9Y651 276 aaPredicted RBP1.94□□□□□ -2.1
TTC3-213ENST00000469939 PCNX2A6NKB5 2137 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 MGAMO43451 1857 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 RFX7Q2KHR2 1363 aa1.94□□□□□ -2.1
TTC3-213ENST00000469939 SYNJ1O43426 1573 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 VWDEQ8N2E2 1590 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 ALPK2Q86TB3 2170 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 FREM3P0C091 2139 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 HEATR1Q9H583 2144 aaKnown RBP1.93□□□□□ -2.1
TTC3-213ENST00000469939 CD2P06729 351 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 SAA1P0DJI8 122 aaPredicted RBP1.93□□□□□ -2.1
TTC3-213ENST00000469939 SLC25A4P12235 298 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 S100A1P23297 94 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 DEFB103AP81534 67 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 KRTAP13-4Q3LI77 160 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 ZNF833PQ6ZTB9 187 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 ZCCHC13Q8WW36 166 aaKnown RBP1.93□□□□□ -2.1
TTC3-213ENST00000469939 MAGOHBQ96A72 148 aaKnown RBP1.93□□□□□ -2.1
TTC3-213ENST00000469939 NABP2Q9BQ15 211 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 TNFSF18Q9UNG2 199 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 COL5A3P25940 1745 aaPredicted RBP1.93□□□□□ -2.1
TTC3-213ENST00000469939 ROCK2O75116 1388 aaKnown RBP1.93□□□□□ -2.1
TTC3-213ENST00000469939 KDM5CP41229 1560 aa1.93□□□□□ -2.1
TTC3-213ENST00000469939 PLXNA4Q9HCM2 1894 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 PPIP5K1Q6PFW1 1433 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 SCAPERQ9BY12 1400 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 COL24A1Q17RW2 1714 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 TRBV6-5A0A0K0K1A5 114 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 C9orf170A2RU37 121 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 F8W036 122 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 K7EP13 123 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 SMIM24O75264 130 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 ERC2-IT1O76042 136 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 TRACP01848 142 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 TSPAN19P0C672 248 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 IGLC6P0CF74 106 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms