RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 ZFP69Q49AA0 526 aa14□□□□□ -0.17
USP11-205ENST00000467378 RAB24Q969Q5 203 aa14□□□□□ -0.17
USP11-205ENST00000467378 CSTL1Q9H114 145 aa14□□□□□ -0.17
USP11-205ENST00000467378 PLA2G2EQ9NZK7 142 aa14□□□□□ -0.17
USP11-205ENST00000467378 A0A0J9YX75 114 aa13.99□□□□□ -0.17
USP11-205ENST00000467378 STAG3L2P0CL84 134 aa13.99□□□□□ -0.17
USP11-205ENST00000467378 STAG3L3P0CL85 134 aa13.99□□□□□ -0.17
USP11-205ENST00000467378 BLNKQ8WV28 456 aa13.99□□□□□ -0.17
USP11-205ENST00000467378 LINC00476Q8WZB0 136 aa13.99□□□□□ -0.17
USP11-205ENST00000467378 CLEC5AQ9NY25 188 aa13.99□□□□□ -0.17
USP11-205ENST00000467378 UBE2CO00762 179 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 HMGB3O15347 200 aaKnown RBP13.98□□□□□ -0.17
USP11-205ENST00000467378 LY6G6CO95867 125 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 SEC11BP0C7V7 166 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 EIF5AP63241 154 aaKnown RBP13.98□□□□□ -0.17
USP11-205ENST00000467378 EBLN2Q6P2I7 272 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 PQLC2Q6ZP29 291 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 SSX7Q7RTT5 188 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 BAP18Q8IXM2 172 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 C9orf62Q8N4C0 152 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 ZNF738Q8NE65 137 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 STOML3Q8TAV4 291 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 CLUHP3Q96NS8 147 aa13.98□□□□□ -0.17
USP11-205ENST00000467378 ACTR3CQ9C0K3 210 aaPredicted RBP13.98□□□□□ -0.17
USP11-205ENST00000467378 PSG9Q00887 426 aa13.97□□□□□ -0.17
USP11-205ENST00000467378 ZNF726P1Q15940 193 aa13.97□□□□□ -0.17
USP11-205ENST00000467378 AKR1C8PQ5T2L2 129 aa13.97□□□□□ -0.17
USP11-205ENST00000467378 MORN3Q6PF18 240 aaPredicted RBP13.97□□□□□ -0.17
USP11-205ENST00000467378 A8MTW9 85 aa13.96□□□□□ -0.17
USP11-205ENST00000467378 ZNF705FA8MVS1 300 aaPredicted RBP13.96□□□□□ -0.17
USP11-205ENST00000467378 GIG44P09565 113 aaPredicted RBP13.96□□□□□ -0.17
USP11-205ENST00000467378 TPT1P13693 172 aaKnown RBP13.96□□□□□ -0.17
USP11-205ENST00000467378 UBE2L3P68036 154 aaKnown RBP13.96□□□□□ -0.17
USP11-205ENST00000467378 Q6ZWC4 215 aa13.96□□□□□ -0.17
USP11-205ENST00000467378 RPUSD4Q96CM3 377 aaKnown RBP13.96□□□□□ -0.17
USP11-205ENST00000467378 RETNQ9HD89 108 aa13.96□□□□□ -0.17
USP11-205ENST00000467378 PRAC2D3DTV9 90 aa13.95□□□□□ -0.18
USP11-205ENST00000467378 ZNF705DP0CH99 300 aaPredicted RBP13.95□□□□□ -0.18
USP11-205ENST00000467378 ZNF705BP0CI00 300 aaPredicted RBP13.95□□□□□ -0.18
USP11-205ENST00000467378 PRB4P10163 310 aaPredicted RBP13.95□□□□□ -0.18
USP11-205ENST00000467378 EXOC3-AS1Q8N2X6 119 aa13.95□□□□□ -0.18
USP11-205ENST00000467378 OR4B1Q8NGF8 309 aa13.95□□□□□ -0.18
USP11-205ENST00000467378 OR8A1Q8NGG7 326 aa13.95□□□□□ -0.18
USP11-205ENST00000467378 PHYHIPLQ96FC7 376 aa13.95□□□□□ -0.18
USP11-205ENST00000467378 CTXND1A0A1B0GTU2 59 aa13.94□□□□□ -0.18
USP11-205ENST00000467378 DUSP14O95147 198 aaKnown RBP13.94□□□□□ -0.18
USP11-205ENST00000467378 CA1P00915 261 aaPredicted RBP13.94□□□□□ -0.18
USP11-205ENST00000467378 IGKV3-20P01619 116 aa13.94□□□□□ -0.18
USP11-205ENST00000467378 ARL14EPLP0DKL9 152 aa13.94□□□□□ -0.18
USP11-205ENST00000467378 C4BPBP20851 252 aa13.94□□□□□ -0.18
USP11-205ENST00000467378 CNN1P51911 297 aaKnown RBP13.94□□□□□ -0.18
USP11-205ENST00000467378 SUN5Q8TC36 379 aa13.94□□□□□ -0.18
USP11-205ENST00000467378 MRPL53Q96EL3 112 aaKnown RBP13.94□□□□□ -0.18
USP11-205ENST00000467378 OVOL2Q9BRP0 275 aa13.94□□□□□ -0.18
USP11-205ENST00000467378 PRELID1Q9Y255 219 aa13.94□□□□□ -0.18
USP11-205ENST00000467378 M0R3E3 92 aa13.93□□□□□ -0.18
USP11-205ENST00000467378 RANP62826 216 aaKnown RBP13.93□□□□□ -0.18
USP11-205ENST00000467378 ICAM4Q14773 271 aa13.93□□□□□ -0.18
USP11-205ENST00000467378 DEFB135Q30KP9 77 aa13.93□□□□□ -0.18
USP11-205ENST00000467378 SLC51BQ86UW2 128 aa13.93□□□□□ -0.18
USP11-205ENST00000467378 LYPD1Q8N2G4 141 aa13.93□□□□□ -0.18
USP11-205ENST00000467378 RNF183Q96D59 192 aa13.93□□□□□ -0.18
USP11-205ENST00000467378 AAMDCQ9H7C9 122 aa13.93□□□□□ -0.18
USP11-205ENST00000467378 TP53TG1Q9Y2A0 90 aa13.93□□□□□ -0.18
USP11-205ENST00000467378 UMAD1C9J7I0 102 aa13.92□□□□□ -0.18
USP11-205ENST00000467378 CXorf1O96002 111 aa13.92□□□□□ -0.18
USP11-205ENST00000467378 GCHFRP30047 84 aa13.92□□□□□ -0.18
USP11-205ENST00000467378 NKX2-5P52952 324 aaPredicted RBP13.92□□□□□ -0.18
USP11-205ENST00000467378 NUTF2P61970 127 aaKnown RBP13.92□□□□□ -0.18
USP11-205ENST00000467378 AMTNQ6UX39 209 aa13.92□□□□□ -0.18
USP11-205ENST00000467378 TMED6Q8WW62 240 aa13.92□□□□□ -0.18
USP11-205ENST00000467378 SPRY2O43597 315 aa13.91□□□□□ -0.18
USP11-205ENST00000467378 FHITP49789 147 aa13.91□□□□□ -0.18
USP11-205ENST00000467378 HIST1H1AQ02539 215 aaPredicted RBP13.91□□□□□ -0.18
USP11-205ENST00000467378 CSNK1G2-AS1Q8NCQ2 148 aa13.91□□□□□ -0.18
USP11-205ENST00000467378 SLC35B3Q9H1N7 401 aa13.91□□□□□ -0.18
USP11-205ENST00000467378 Q9H3A6 140 aa13.91□□□□□ -0.18
USP11-205ENST00000467378 FXYD7P58549 80 aa13.9□□□□□ -0.18
USP11-205ENST00000467378 OR10J6PQ8NGY7 276 aa13.89□□□□□ -0.19
USP11-205ENST00000467378 OTORQ9NRC9 128 aa13.89□□□□□ -0.19
USP11-205ENST00000467378 TMEM167BQ9NRX6 74 aa13.89□□□□□ -0.19
USP11-205ENST00000467378 XCL2Q9UBD3 114 aa13.89□□□□□ -0.19
USP11-205ENST00000467378 MAP1LC3B2A6NCE7 125 aa13.88□□□□□ -0.19
USP11-205ENST00000467378 PGPA6NDG6 321 aa13.88□□□□□ -0.19
USP11-205ENST00000467378 FGF8P55075 233 aaPredicted RBP13.88□□□□□ -0.19
USP11-205ENST00000467378 EIF5AL1Q6IS14 154 aaKnown RBP13.88□□□□□ -0.19
USP11-205ENST00000467378 DPPA3Q6W0C5 159 aa13.88□□□□□ -0.19
USP11-205ENST00000467378 MBD3L1Q8WWY6 194 aa13.88□□□□□ -0.19
USP11-205ENST00000467378 C1QTNF4Q9BXJ3 329 aa13.88□□□□□ -0.19
USP11-205ENST00000467378 MAP1LC3BQ9GZQ8 125 aa13.88□□□□□ -0.19
USP11-205ENST00000467378 TMPRSS5Q9H3S3 457 aa13.88□□□□□ -0.19
USP11-205ENST00000467378 NPIPB6E9PJ23 425 aa13.87□□□□□ -0.19
USP11-205ENST00000467378 FAM213BQ8TBF2 198 aa13.87□□□□□ -0.19
USP11-205ENST00000467378 BOLA1Q9Y3E2 137 aa13.87□□□□□ -0.19
USP11-205ENST00000467378 RYR1P21817 5038 aa13.86□□□□□ -0.19
USP11-205ENST00000467378 ERCC8Q13216 396 aa13.86□□□□□ -0.19
USP11-205ENST00000467378 RXFP4Q8TDU9 374 aa13.86□□□□□ -0.19
USP11-205ENST00000467378 DIRC3C9JPN6 131 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 BOLA2-SMG1P6H3BVE0 249 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 M0R2Z0 102 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms