RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 OR2H1Q9GZK4 316 aa0.49□□□□□ -2.33
SMC4-205ENST00000465563 MAP1LC3BQ9GZQ8 125 aa0.49□□□□□ -2.33
SMC4-205ENST00000465563 TAF9BQ9HBM6 251 aa0.49□□□□□ -2.33
SMC4-205ENST00000465563 OTORQ9NRC9 128 aa0.49□□□□□ -2.33
SMC4-205ENST00000465563 ZCCHC11Q5TAX3 1644 aaKnown RBP0.49□□□□□ -2.33
SMC4-205ENST00000465563 K7EIL1 84 aa0.48□□□□□ -2.33
SMC4-205ENST00000465563 PPYP01298 95 aa0.48□□□□□ -2.33
SMC4-205ENST00000465563 IGLV3-1P01715 115 aa0.48□□□□□ -2.33
SMC4-205ENST00000465563 IGHV3-33P01772 117 aa0.48□□□□□ -2.33
SMC4-205ENST00000465563 RTL8BQ17RB0 113 aa0.48□□□□□ -2.33
SMC4-205ENST00000465563 FOXI2Q6ZQN5 318 aa0.48□□□□□ -2.33
SMC4-205ENST00000465563 LINC00269Q8N2A0 174 aa0.48□□□□□ -2.33
SMC4-205ENST00000465563 LRRC18Q8N456 261 aa0.48□□□□□ -2.33
SMC4-205ENST00000465563 C10orf95Q9H7T3 257 aa0.48□□□□□ -2.33
SMC4-205ENST00000465563 FRAS1Q86XX4 4008 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 CST7O76096 145 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 PPP1R2P41236 205 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 RPL35P42766 123 aaKnown RBP0.47□□□□□ -2.33
SMC4-205ENST00000465563 TCTAP57738 103 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 VBP1P61758 197 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 MIR22HGQ0VDD5 57 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 PPP1R2P3Q6NXS1 205 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 IFT20Q8IY31 132 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 FAM216BQ8N7L0 139 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 OR10AC1Q8NH08 325 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 CCL4L1Q8NHW4 92 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 LRTM1Q9HBL6 345 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 BIN3Q9NQY0 253 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 GID8Q9NWU2 228 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 IL20Q9NYY1 176 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 TECPR2O15040 1411 aa0.47□□□□□ -2.33
SMC4-205ENST00000465563 YTHDC2Q9H6S0 1430 aaKnown RBP0.47□□□□□ -2.33
SMC4-205ENST00000465563 ANK1P16157 1881 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 FER1L6Q2WGJ9 1857 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 KIAA1549LQ6ZVL6 1849 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 H7BYZ3 331 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 GPR31O00270 319 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 G0S2P27469 103 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 GNG10P50151 68 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 STX19Q8N4C7 294 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 NEK7Q8TDX7 302 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 DIRC1Q969H9 104 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 WFDC10AQ9H1F0 79 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 HSPB8Q9UJY1 196 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 NUBP2Q9Y5Y2 271 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 BCL9O00512 1426 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 CACNA1EQ15878 2313 aa0.46□□□□□ -2.34
SMC4-205ENST00000465563 ROCK1Q13464 1354 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 A0A0D9SG42 100 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 E5RI56 91 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 PPP5D1E7EU14 171 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 LYRM1O43325 122 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 SERPINB1P30740 379 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 FOXA3P55318 350 aaPredicted RBP0.45□□□□□ -2.34
SMC4-205ENST00000465563 SPATA45Q537H7 98 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 TMEM78Q5T7P6 136 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 C3orf33Q6P1S2 294 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 TRPM7Q96QT4 1865 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 KIAA1107Q9UPP5 1409 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 TRAPPC8Q9Y2L5 1435 aa0.45□□□□□ -2.34
SMC4-205ENST00000465563 USP54Q70EL1 1684 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 CTTNBP2Q8WZ74 1663 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 A0A0J9YY99 117 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 TRDV1A0A1B0GX56 115 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 CD14P08571 375 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 CIRBPQ14011 172 aaKnown RBP0.44□□□□□ -2.34
SMC4-205ENST00000465563 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 ZCCHC23Q6ZST2 131 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 BORCS8Q96FH0 119 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 LAMTOR3Q9UHA4 124 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 MYH1P12882 1939 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 ATG2AQ2TAZ0 1938 aa0.44□□□□□ -2.34
SMC4-205ENST00000465563 NAV3Q8IVL0 2385 aa0.43□□□□□ -2.34
SMC4-205ENST00000465563 USP24Q9UPU5 2620 aa0.43□□□□□ -2.34
SMC4-205ENST00000465563 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
SMC4-205ENST00000465563 H3BQV1 296 aa0.43□□□□□ -2.34
SMC4-205ENST00000465563 KPNA4O00629 521 aaPredicted RBP0.43□□□□□ -2.34
SMC4-205ENST00000465563 FAM24BQ8N5W8 94 aa0.43□□□□□ -2.34
SMC4-205ENST00000465563 CST11Q9H112 138 aa0.43□□□□□ -2.34
SMC4-205ENST00000465563 NAT8BQ9UHF3 227 aa0.43□□□□□ -2.34
SMC4-205ENST00000465563 TRAV23DV6A0A075B6W5 121 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 MAP1LC3B2A6NCE7 125 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 A6NN06 94 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 PDE6GP18545 87 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 FXYD4P59646 89 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 DIAPH2-AS1Q14236 149 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 DCUN1D2Q6PH85 259 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 ATOH7Q8N100 152 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 MCEEQ96PE7 176 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 LIMD2Q9BT23 127 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 TCEAL2Q9H3H9 227 aaPredicted RBP0.42□□□□□ -2.34
SMC4-205ENST00000465563 MED11Q9P086 117 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 SMPXQ9UHP9 88 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 APCP25054 2843 aa0.42□□□□□ -2.34
SMC4-205ENST00000465563 A0A1W2PRE2 83 aa0.41□□□□□ -2.34
SMC4-205ENST00000465563 FABP4P15090 132 aa0.41□□□□□ -2.34
SMC4-205ENST00000465563 MRPS36P82909 103 aaKnown RBP0.41□□□□□ -2.34
SMC4-205ENST00000465563 OCIAD2Q56VL3 154 aa0.41□□□□□ -2.34
SMC4-205ENST00000465563 TRIQKQ629K1 86 aa0.41□□□□□ -2.34
SMC4-205ENST00000465563 SPATA8Q6RVD6 105 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms