RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 OR8A1Q8NGG7 326 aa12.43□□□□□ -0.42
USP39-211ENST00000465282 RNF183Q96D59 192 aa12.43□□□□□ -0.42
USP39-211ENST00000465282 RCHY1Q96PM5 261 aa12.43□□□□□ -0.42
USP39-211ENST00000465282 CTXND1A0A1B0GTU2 59 aa12.42□□□□□ -0.42
USP39-211ENST00000465282 F6UB75 175 aa12.42□□□□□ -0.42
USP39-211ENST00000465282 SPRY2O43597 315 aa12.42□□□□□ -0.42
USP39-211ENST00000465282 CXorf1O96002 111 aa12.42□□□□□ -0.42
USP39-211ENST00000465282 CA1P00915 261 aaPredicted RBP12.42□□□□□ -0.42
USP39-211ENST00000465282 HLA-DMBP28068 263 aa12.42□□□□□ -0.42
USP39-211ENST00000465282 OR4B1Q8NGF8 309 aa12.42□□□□□ -0.42
USP39-211ENST00000465282 HUWE1Q7Z6Z7 4374 aaKnown RBP12.41□□□□□ -0.42
USP39-211ENST00000465282 ARL14EPLP0DKL9 152 aa12.41□□□□□ -0.42
USP39-211ENST00000465282 DEFB1P60022 68 aa12.41□□□□□ -0.42
USP39-211ENST00000465282 CD300CQ08708 224 aa12.41□□□□□ -0.42
USP39-211ENST00000465282 DPPA3Q6W0C5 159 aa12.41□□□□□ -0.42
USP39-211ENST00000465282 SLC51BQ86UW2 128 aa12.41□□□□□ -0.42
USP39-211ENST00000465282 OR10J6PQ8NGY7 276 aa12.41□□□□□ -0.42
USP39-211ENST00000465282 SUN5Q8TC36 379 aa12.41□□□□□ -0.42
USP39-211ENST00000465282 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
USP39-211ENST00000465282 TMEM167BQ9NRX6 74 aa12.41□□□□□ -0.42
USP39-211ENST00000465282 TENM3Q9P273 2699 aa12.41□□□□□ -0.42
USP39-211ENST00000465282 AMBPP02760 352 aa12.4□□□□□ -0.42
USP39-211ENST00000465282 GIG44P09565 113 aaPredicted RBP12.4□□□□□ -0.42
USP39-211ENST00000465282 CNN1P51911 297 aaKnown RBP12.4□□□□□ -0.42
USP39-211ENST00000465282 DEFB135Q30KP9 77 aa12.4□□□□□ -0.42
USP39-211ENST00000465282 FAM74A1Q5RGS3 127 aa12.4□□□□□ -0.42
USP39-211ENST00000465282 ARL6IP6Q8N6S5 226 aa12.4□□□□□ -0.42
USP39-211ENST00000465282 ZNF705FA8MVS1 300 aaPredicted RBP12.39□□□□□ -0.43
USP39-211ENST00000465282 HMGB3O15347 200 aaKnown RBP12.39□□□□□ -0.43
USP39-211ENST00000465282 RANP62826 216 aaKnown RBP12.39□□□□□ -0.43
USP39-211ENST00000465282 HIST1H1AQ02539 215 aaPredicted RBP12.39□□□□□ -0.43
USP39-211ENST00000465282 ICAM4Q14773 271 aa12.39□□□□□ -0.43
USP39-211ENST00000465282 C9orf62Q8N4C0 152 aa12.39□□□□□ -0.43
USP39-211ENST00000465282 PHYHIPLQ96FC7 376 aa12.39□□□□□ -0.43
USP39-211ENST00000465282 STAB2Q8WWQ8 2551 aa12.38□□□□□ -0.43
USP39-211ENST00000465282 IGKV3-20P01619 116 aa12.38□□□□□ -0.43
USP39-211ENST00000465282 GCHFRP30047 84 aa12.38□□□□□ -0.43
USP39-211ENST00000465282 CSN1S1P47710 185 aa12.38□□□□□ -0.43
USP39-211ENST00000465282 RAB5CP51148 216 aa12.38□□□□□ -0.43
USP39-211ENST00000465282 AMTNQ6UX39 209 aa12.38□□□□□ -0.43
USP39-211ENST00000465282 EXOC3-AS1Q8N2X6 119 aa12.38□□□□□ -0.43
USP39-211ENST00000465282 RXFP4Q8TDU9 374 aa12.38□□□□□ -0.43
USP39-211ENST00000465282 Q9H3A6 140 aa12.38□□□□□ -0.43
USP39-211ENST00000465282 OTORQ9NRC9 128 aa12.38□□□□□ -0.43
USP39-211ENST00000465282 M0R3E3 92 aa12.37□□□□□ -0.43
USP39-211ENST00000465282 ZNF726P1Q15940 193 aa12.37□□□□□ -0.43
USP39-211ENST00000465282 CSNK1G2-AS1Q8NCQ2 148 aa12.37□□□□□ -0.43
USP39-211ENST00000465282 TMED6Q8WW62 240 aa12.37□□□□□ -0.43
USP39-211ENST00000465282 LINC00477Q96M19 166 aa12.37□□□□□ -0.43
USP39-211ENST00000465282 ODF3Q96PU9 254 aa12.37□□□□□ -0.43
USP39-211ENST00000465282 RETNQ9HD89 108 aa12.37□□□□□ -0.43
USP39-211ENST00000465282 PPP1R14DQ9NXH3 145 aa12.37□□□□□ -0.43
USP39-211ENST00000465282 EIF3GO75821 320 aaKnown RBP eCLIP12.36□□□□□ -0.43
USP39-211ENST00000465282 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
USP39-211ENST00000465282 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
USP39-211ENST00000465282 SLC35B3Q9H1N7 401 aa12.36□□□□□ -0.43
USP39-211ENST00000465282 XCL2Q9UBD3 114 aa12.36□□□□□ -0.43
USP39-211ENST00000465282 RBAKDNA6NC62 111 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 MAP1LC3B2A6NCE7 125 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 PRAC2D3DTV9 90 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 NPIPB6E9PJ23 425 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 BOLA2-SMG1P6H3BVE0 249 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 SLC25A5P05141 298 aaKnown RBP12.35□□□□□ -0.43
USP39-211ENST00000465282 TSPOP30536 169 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 C9orf47Q6ZRZ4 202 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 SSX7Q7RTT5 188 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 CMTM2Q8TAZ6 248 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 MBD3L1Q8WWY6 194 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 RARRES2Q99969 163 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 NKX6-2Q9C056 277 aaPredicted RBP12.35□□□□□ -0.43
USP39-211ENST00000465282 MAP1LC3BQ9GZQ8 125 aa12.35□□□□□ -0.43
USP39-211ENST00000465282 PGPA6NDG6 321 aa12.34□□□□□ -0.43
USP39-211ENST00000465282 ZNF705EA8MWA4 302 aaPredicted RBP12.34□□□□□ -0.43
USP39-211ENST00000465282 OR11H2Q8NH07 326 aa12.34□□□□□ -0.43
USP39-211ENST00000465282 IGF2BP2-AS1Q96M15 143 aa12.34□□□□□ -0.43
USP39-211ENST00000465282 WWC2-AS2Q96NR7 200 aa12.34□□□□□ -0.43
USP39-211ENST00000465282 A0A1W2PRE2 83 aa12.33□□□□□ -0.44
USP39-211ENST00000465282 CDKN1BP46527 198 aa12.33□□□□□ -0.44
USP39-211ENST00000465282 IQCF2Q8IXL9 164 aa12.33□□□□□ -0.44
USP39-211ENST00000465282 FAM213BQ8TBF2 198 aa12.33□□□□□ -0.44
USP39-211ENST00000465282 PLA2G2EQ9NZK7 142 aa12.33□□□□□ -0.44
USP39-211ENST00000465282 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.44
USP39-211ENST00000465282 TRBV7-9A0A0J9YWB2 115 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 SERTM2A0A1B0GWG4 89 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 SMIM9A6NGZ8 99 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 DIRC3C9JPN6 131 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 NMBP08949 121 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 H2AFB1P0C5Y9 115 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 MIFP14174 115 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 LEPP41159 167 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 FHITP49789 147 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 SULT1A2P50226 295 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 FXYD7P58549 80 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 SPINK13Q1W4C9 94 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 TMEM78Q5T7P6 136 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 ZNF705AQ6ZN79 300 aaPredicted RBP12.32□□□□□ -0.44
USP39-211ENST00000465282 C5orf17Q8NAS9 161 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 SFT2D1Q8WV19 159 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 NEU1Q99519 415 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 EDA2RQ9HAV5 297 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms