RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PRSS33Q8NF86 280 aa5.71□□□□□ -1.49
USP48-206ENST00000464577 CCL17Q92583 94 aa5.71□□□□□ -1.49
USP48-206ENST00000464577 RNF185Q96GF1 192 aa5.71□□□□□ -1.49
USP48-206ENST00000464577 PRR25Q96S07 402 aa5.71□□□□□ -1.49
USP48-206ENST00000464577 IGKV2D-26A0A0A0MRZ7 120 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 TEX48A0A1B0GUV7 120 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 SMKR1H3BMG3 65 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 IGKCP01834 107 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 FTH1P19P0C7X4 201 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 PPIAL4GP0DN37 164 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 EGR2P11161 476 aaPredicted RBP5.71□□□□□ -1.5
USP48-206ENST00000464577 TMEM11P17152 192 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 FXYD7P58549 80 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 TWIST1Q15672 202 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 ZNF562Q6V9R5 426 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 FOXI2Q6ZQN5 318 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 CEND1Q8N111 149 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 PSMG3-AS1Q96PY0 264 aa5.71□□□□□ -1.5
USP48-206ENST00000464577 PPIAL4CA0A0B4J2A2 164 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 E9PLD3 99 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 F8W1H4 67 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 DPM2O94777 84 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 LEPP41159 167 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 TCTAP57738 103 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 RPL24P83731 157 aaKnown RBP5.7□□□□□ -1.5
USP48-206ENST00000464577 DEFB109BQ30KR1 87 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 TMEM95Q3KNT9 176 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 IGFL3Q6UXB1 125 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 RPEQ96AT9 228 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 TRBV25-1A0A075B6N4 114 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 IGKV2-40A0A087WW87 121 aaPredicted RBP5.7□□□□□ -1.5
USP48-206ENST00000464577 C16orf97H3BN30 126 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 LY6LH3BQJ8 138 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 J3QR89 54 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 ZNF207O43670 478 aaKnown RBP5.7□□□□□ -1.5
USP48-206ENST00000464577 IGKV2D-40P01614 121 aaPredicted RBP5.7□□□□□ -1.5
USP48-206ENST00000464577 RPL7P18124 248 aaKnown RBP5.7□□□□□ -1.5
USP48-206ENST00000464577 TM4SF20Q53R12 229 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 KLF17Q5JT82 389 aaPredicted RBP5.7□□□□□ -1.5
USP48-206ENST00000464577 Q8N8P6 123 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 RNASE6Q93091 150 aaKnown RBP5.7□□□□□ -1.5
USP48-206ENST00000464577 SIGMAR1Q99720 223 aa5.7□□□□□ -1.5
USP48-206ENST00000464577 SPANXB1Q9NS25 103 aaPredicted RBP5.7□□□□□ -1.5
USP48-206ENST00000464577 RALYQ9UKM9 306 aaKnown RBP5.7□□□□□ -1.5
USP48-206ENST00000464577 CADP27708 2225 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 A0A1W2PRD5 423 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 A0A1W2PRF3 423 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 A0A1W2PRM7 423 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 LINC01619G3V211 115 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 GNG7O60262 68 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 CNIH1O95406 144 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 TNFRSF6BO95407 300 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 MFAP4P55083 255 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 BSPH1Q075Z2 132 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 CD300EQ496F6 205 aaPredicted RBP5.69□□□□□ -1.5
USP48-206ENST00000464577 GFRALQ6UXV0 394 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 ZNF575Q86XF7 245 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 WFDC3Q8IUB2 231 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 FAM57AQ8TBR7 257 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 IGFBPL1Q8WX77 278 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 C18orf15Q96N68 181 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 SELENOKQ9Y6D0 94 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 KNTC1P50748 2209 aa5.69□□□□□ -1.5
USP48-206ENST00000464577 IGLV11-55A0A075B6I3 123 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 NPIPB5A8MRT5 1133 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 PRSS47A8MTI9 375 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 IGLL5B9A064 214 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 K7ERJ3 54 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 PRSS1P07477 247 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 AZU1P20160 251 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 ZNF80P51504 273 aaPredicted RBP5.68□□□□□ -1.5
USP48-206ENST00000464577 CLEC2AQ6UVW9 174 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 Q6ZS92 163 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 FOXC2Q99958 501 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 NHP2Q9NX24 153 aaKnown RBP5.68□□□□□ -1.5
USP48-206ENST00000464577 FRYQ5TBA9 3013 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 IGLV2-18A0A075B6J9 118 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 A6NJY4 79 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 NBR2O15453 112 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 NDUFA3O95167 84 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 ZC2HC1BQ5TFG8 222 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 GTSCR1Q86UQ5 136 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 NPBQ8NG41 125 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 ZNF502Q8TBZ5 544 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 ZNF479Q96JC4 524 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 DYNLRB1Q9NP97 96 aa5.68□□□□□ -1.5
USP48-206ENST00000464577 A0A1B0GWB2 263 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 GAGE12HA6NDE8 117 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 TMEM8BA6NDV4 472 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 FABP5P3A8MUU1 101 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 F8W735 103 aaPredicted RBP5.67□□□□□ -1.5
USP48-206ENST00000464577 SCGB2A1O75556 95 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 COX7A1P24310 79 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 IGF2-ASQ6U949 168 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 Q8TAT8 98 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 TMEM158Q8WZ71 300 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 ARPC1AQ92747 370 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 FANCD2OSQ96PS1 177 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 TTTY13Q9BZ97 58 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms