RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CNN1P51911 297 aaKnown RBP14.52□□□□□ -0.09
COL9A3-204ENST00000463487 DEFB1P60022 68 aa14.52□□□□□ -0.09
COL9A3-204ENST00000463487 HIST1H1AQ02539 215 aaPredicted RBP14.52□□□□□ -0.09
COL9A3-204ENST00000463487 FAM74A1Q5RGS3 127 aa14.52□□□□□ -0.09
COL9A3-204ENST00000463487 BAP18Q8IXM2 172 aa14.52□□□□□ -0.09
COL9A3-204ENST00000463487 RNF183Q96D59 192 aa14.52□□□□□ -0.09
COL9A3-204ENST00000463487 RETNQ9HD89 108 aa14.52□□□□□ -0.09
COL9A3-204ENST00000463487 CTXND1A0A1B0GTU2 59 aa14.51□□□□□ -0.09
COL9A3-204ENST00000463487 HMGB3O15347 200 aaKnown RBP14.51□□□□□ -0.09
COL9A3-204ENST00000463487 NDUFB4O95168 129 aa14.51□□□□□ -0.09
COL9A3-204ENST00000463487 CXorf1O96002 111 aa14.51□□□□□ -0.09
COL9A3-204ENST00000463487 AMBPP02760 352 aa14.51□□□□□ -0.09
COL9A3-204ENST00000463487 ARL14EPLP0DKL9 152 aa14.51□□□□□ -0.09
COL9A3-204ENST00000463487 CSN1S1P47710 185 aa14.51□□□□□ -0.09
COL9A3-204ENST00000463487 STOML3Q8TAV4 291 aa14.51□□□□□ -0.09
COL9A3-204ENST00000463487 TMEM167BQ9NRX6 74 aa14.51□□□□□ -0.09
COL9A3-204ENST00000463487 AGRNO00468 2067 aa14.51□□□□□ -0.09
COL9A3-204ENST00000463487 ICAM4Q14773 271 aa14.5□□□□□ -0.09
COL9A3-204ENST00000463487 LGALSLQ3ZCW2 172 aaPredicted RBP14.5□□□□□ -0.09
COL9A3-204ENST00000463487 ZNF503Q96F45 646 aa14.5□□□□□ -0.09
COL9A3-204ENST00000463487 OVOL2Q9BRP0 275 aa14.5□□□□□ -0.09
COL9A3-204ENST00000463487 RANP62826 216 aaKnown RBP14.49□□□□□ -0.09
COL9A3-204ENST00000463487 IQCF2Q8IXL9 164 aa14.49□□□□□ -0.09
COL9A3-204ENST00000463487 EXOC3-AS1Q8N2X6 119 aa14.49□□□□□ -0.09
COL9A3-204ENST00000463487 PHYHIPLQ96FC7 376 aa14.49□□□□□ -0.09
COL9A3-204ENST00000463487 Q9H3A6 140 aa14.49□□□□□ -0.09
COL9A3-204ENST00000463487 A8MTW9 85 aa14.48□□□□□ -0.09
COL9A3-204ENST00000463487 ZNF705FA8MVS1 300 aaPredicted RBP14.48□□□□□ -0.09
COL9A3-204ENST00000463487 SLC51BQ86UW2 128 aa14.48□□□□□ -0.09
COL9A3-204ENST00000463487 CMTM2Q8TAZ6 248 aa14.48□□□□□ -0.09
COL9A3-204ENST00000463487 RXFP4Q8TDU9 374 aa14.48□□□□□ -0.09
COL9A3-204ENST00000463487 XCL2Q9UBD3 114 aa14.48□□□□□ -0.09
COL9A3-204ENST00000463487 EIF3GO75821 320 aaKnown RBP eCLIP14.47□□□□□ -0.09
COL9A3-204ENST00000463487 ZNF705DP0CH99 300 aaPredicted RBP14.47□□□□□ -0.09
COL9A3-204ENST00000463487 ZNF705BP0CI00 300 aaPredicted RBP14.47□□□□□ -0.09
COL9A3-204ENST00000463487 GCHFRP30047 84 aa14.47□□□□□ -0.09
COL9A3-204ENST00000463487 TSPOP30536 169 aa14.47□□□□□ -0.09
COL9A3-204ENST00000463487 DPPA3Q6W0C5 159 aa14.47□□□□□ -0.09
COL9A3-204ENST00000463487 RARRES2Q99969 163 aa14.47□□□□□ -0.09
COL9A3-204ENST00000463487 OTORQ9NRC9 128 aa14.47□□□□□ -0.09
COL9A3-204ENST00000463487 BOLA2-SMG1P6H3BVE0 249 aa14.46□□□□□ -0.09
COL9A3-204ENST00000463487 M0R3E3 92 aa14.46□□□□□ -0.09
COL9A3-204ENST00000463487 OR11H2Q8NH07 326 aa14.46□□□□□ -0.09
COL9A3-204ENST00000463487 TMED6Q8WW62 240 aa14.46□□□□□ -0.09
COL9A3-204ENST00000463487 WWC2-AS2Q96NR7 200 aa14.46□□□□□ -0.09
COL9A3-204ENST00000463487 SLC35B3Q9H1N7 401 aa14.46□□□□□ -0.09
COL9A3-204ENST00000463487 TGP01266 2768 aa14.46□□□□□ -0.09
COL9A3-204ENST00000463487 GIG44P09565 113 aaPredicted RBP14.45□□□□□ -0.1
COL9A3-204ENST00000463487 FXYD7P58549 80 aa14.45□□□□□ -0.1
COL9A3-204ENST00000463487 CD300CQ08708 224 aa14.45□□□□□ -0.1
COL9A3-204ENST00000463487 C9orf62Q8N4C0 152 aa14.45□□□□□ -0.1
COL9A3-204ENST00000463487 GOLT1BQ9Y3E0 138 aa14.45□□□□□ -0.1
COL9A3-204ENST00000463487 MAP1LC3B2A6NCE7 125 aa14.44□□□□□ -0.1
COL9A3-204ENST00000463487 PRAC2D3DTV9 90 aa14.44□□□□□ -0.1
COL9A3-204ENST00000463487 NPIPB6E9PJ23 425 aa14.44□□□□□ -0.1
COL9A3-204ENST00000463487 RAB5CP51148 216 aa14.44□□□□□ -0.1
COL9A3-204ENST00000463487 AMTNQ6UX39 209 aa14.44□□□□□ -0.1
COL9A3-204ENST00000463487 ARL6IP6Q8N6S5 226 aa14.44□□□□□ -0.1
COL9A3-204ENST00000463487 FAM213BQ8TBF2 198 aa14.44□□□□□ -0.1
COL9A3-204ENST00000463487 LINC00477Q96M19 166 aa14.44□□□□□ -0.1
COL9A3-204ENST00000463487 ODF3Q96PU9 254 aa14.44□□□□□ -0.1
COL9A3-204ENST00000463487 MAP1LC3BQ9GZQ8 125 aa14.44□□□□□ -0.1
COL9A3-204ENST00000463487 PGPA6NDG6 321 aa14.43□□□□□ -0.1
COL9A3-204ENST00000463487 INSP01308 110 aa14.43□□□□□ -0.1
COL9A3-204ENST00000463487 LEPP41159 167 aa14.43□□□□□ -0.1
COL9A3-204ENST00000463487 CDKN1BP46527 198 aa14.43□□□□□ -0.1
COL9A3-204ENST00000463487 ZNF726P1Q15940 193 aa14.43□□□□□ -0.1
COL9A3-204ENST00000463487 SPINK13Q1W4C9 94 aa14.43□□□□□ -0.1
COL9A3-204ENST00000463487 TMEM78Q5T7P6 136 aa14.43□□□□□ -0.1
COL9A3-204ENST00000463487 SUN5Q8TC36 379 aa14.43□□□□□ -0.1
COL9A3-204ENST00000463487 IGF2BP2-AS1Q96M15 143 aa14.43□□□□□ -0.1
COL9A3-204ENST00000463487 RBAKDNA6NC62 111 aa14.42□□□□□ -0.1
COL9A3-204ENST00000463487 M0R2Z0 102 aa14.42□□□□□ -0.1
COL9A3-204ENST00000463487 CSNK1G2-AS1Q8NCQ2 148 aa14.42□□□□□ -0.1
COL9A3-204ENST00000463487 TMEM208Q9BTX3 173 aa14.42□□□□□ -0.1
COL9A3-204ENST00000463487 ZNF705EA8MWA4 302 aaPredicted RBP14.41□□□□□ -0.1
COL9A3-204ENST00000463487 TEX46H3BTG2 121 aa14.41□□□□□ -0.1
COL9A3-204ENST00000463487 SLC25A5P05141 298 aaKnown RBP14.41□□□□□ -0.1
COL9A3-204ENST00000463487 MIFP14174 115 aa14.41□□□□□ -0.1
COL9A3-204ENST00000463487 C9orf47Q6ZRZ4 202 aa14.41□□□□□ -0.1
COL9A3-204ENST00000463487 SSX7Q7RTT5 188 aa14.41□□□□□ -0.1
COL9A3-204ENST00000463487 COL7A1Q02388 2944 aa14.4□□□□□ -0.1
COL9A3-204ENST00000463487 IGKV2-40A0A087WW87 121 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-204ENST00000463487 SERTM2A0A1B0GWG4 89 aa14.4□□□□□ -0.1
COL9A3-204ENST00000463487 A0A1W2PRE2 83 aa14.4□□□□□ -0.1
COL9A3-204ENST00000463487 K7EQM0 130 aa14.4□□□□□ -0.1
COL9A3-204ENST00000463487 IGKV2D-40P01614 121 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-204ENST00000463487 PRB4P10163 310 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-204ENST00000463487 FGF8P55075 233 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-204ENST00000463487 C5orf17Q8NAS9 161 aa14.4□□□□□ -0.1
COL9A3-204ENST00000463487 SFT2D1Q8WV19 159 aa14.4□□□□□ -0.1
COL9A3-204ENST00000463487 NKX6-2Q9C056 277 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-204ENST00000463487 DNAH9Q9NYC9 4486 aa14.39□□□□□ -0.11
COL9A3-204ENST00000463487 IGHV3OR16-12A0A075B7B8 117 aa14.39□□□□□ -0.11
COL9A3-204ENST00000463487 SMIM9A6NGZ8 99 aa14.39□□□□□ -0.11
COL9A3-204ENST00000463487 H2AFB1P0C5Y9 115 aa14.39□□□□□ -0.11
COL9A3-204ENST00000463487 FHITP49789 147 aa14.39□□□□□ -0.11
COL9A3-204ENST00000463487 ZNF705AQ6ZN79 300 aaPredicted RBP14.39□□□□□ -0.11
COL9A3-204ENST00000463487 TMEM256Q8N2U0 113 aa14.39□□□□□ -0.11
COL9A3-204ENST00000463487 IL17DQ8TAD2 202 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms