RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ZNF705AQ6ZN79 300 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-213ENST00000462730 BAGE3Q86Y29 109 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 BAGE2Q86Y30 109 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 ZNF414Q96IQ9 312 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 VAMP8Q9BV40 100 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 RABAC1Q9UI14 185 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 FAM223BA6NKX1 122 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 ISLRO14498 428 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 MRPS12O15235 138 aaKnown RBP11.23□□□□□ -0.61
HDAC6-213ENST00000462730 FAM223AQ8IWN6 122 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 OR8I2Q8N0Y5 310 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 GNB1LQ9BYB4 327 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 IGHV3OR16-8A0A075B7F1 116 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 F2Z2F3 143 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 BMPR1BO00238 502 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 CIDEAO60543 219 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 UBE2G1P62253 170 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 TDRG1Q3Y452 100 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 WDR73Q6P4I2 378 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 Q6ZS46 218 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 EXOC3-AS1Q8N2X6 119 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 C17orf77Q96MU5 243 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 SAMD10Q9BYL1 202 aa11.22□□□□□ -0.61
HDAC6-213ENST00000462730 Q6YL49 198 aa11.21□□□□□ -0.61
HDAC6-213ENST00000462730 ZFAND3Q9H8U3 227 aa11.21□□□□□ -0.61
HDAC6-213ENST00000462730 ZFP30Q9Y2G7 519 aa11.21□□□□□ -0.61
HDAC6-213ENST00000462730 TCRAP04437 139 aa11.21□□□□□ -0.62
HDAC6-213ENST00000462730 NPSP0C0P6 89 aa11.21□□□□□ -0.62
HDAC6-213ENST00000462730 CDKN1BP46527 198 aa11.21□□□□□ -0.62
HDAC6-213ENST00000462730 RBX1P62877 108 aa11.21□□□□□ -0.62
HDAC6-213ENST00000462730 KRTAP1-1Q07627 177 aa11.21□□□□□ -0.62
HDAC6-213ENST00000462730 SGK494Q96LW2 274 aa11.21□□□□□ -0.62
HDAC6-213ENST00000462730 RNASE7Q9H1E1 156 aaKnown RBP11.21□□□□□ -0.62
HDAC6-213ENST00000462730 VPREB3Q9UKI3 123 aa11.21□□□□□ -0.62
HDAC6-213ENST00000462730 OSTCQ9NRP0 149 aa11.2□□□□□ -0.62
HDAC6-213ENST00000462730 NAT8BQ9UHF3 227 aa11.2□□□□□ -0.62
HDAC6-213ENST00000462730 PAM16Q9Y3D7 125 aa11.2□□□□□ -0.62
HDAC6-213ENST00000462730 KLF12Q9Y4X4 402 aa11.2□□□□□ -0.62
HDAC6-213ENST00000462730 HSBP1L1C9JCN9 74 aa11.19□□□□□ -0.62
HDAC6-213ENST00000462730 H3BUA1 57 aa11.19□□□□□ -0.62
HDAC6-213ENST00000462730 HOXA3O43365 443 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-213ENST00000462730 PPIFP30405 207 aaKnown RBP11.19□□□□□ -0.62
HDAC6-213ENST00000462730 S100A7P31151 101 aa11.19□□□□□ -0.62
HDAC6-213ENST00000462730 OR10J3Q5JRS4 329 aa11.19□□□□□ -0.62
HDAC6-213ENST00000462730 SIGLEC15Q6ZMC9 328 aa11.19□□□□□ -0.62
HDAC6-213ENST00000462730 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
HDAC6-213ENST00000462730 RPL7P18124 248 aaKnown RBP11.19□□□□□ -0.62
HDAC6-213ENST00000462730 LYPD1Q8N2G4 141 aa11.19□□□□□ -0.62
HDAC6-213ENST00000462730 KLHDC1Q8N7A1 406 aa11.19□□□□□ -0.62
HDAC6-213ENST00000462730 SIGLECL1Q8N7X8 197 aa11.19□□□□□ -0.62
HDAC6-213ENST00000462730 MXRA5Q9NR99 2828 aa11.19□□□□□ -0.62
HDAC6-213ENST00000462730 TLN2Q9Y4G6 2542 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 C20orf202A1L168 122 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 CD5LO43866 347 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 SPINK4O60575 86 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 GPX1P07203 203 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 PF4V1P10720 104 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 IBA57Q5T440 356 aaKnown RBP11.18□□□□□ -0.62
HDAC6-213ENST00000462730 TMEM136Q6ZRR5 245 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 GOLT1AQ6ZVE7 132 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 TEX29Q8N6K0 151 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 ATP6V0BQ99437 205 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 UQCR10Q9UDW1 63 aa11.18□□□□□ -0.62
HDAC6-213ENST00000462730 BRI3O95415 125 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 PDE6HQ13956 83 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 TMEM95Q3KNT9 176 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 ORAOV1Q8WV07 137 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 RNF114Q9Y508 228 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 ARL3P36405 182 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 SLC35B1P78383 322 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 OR2D3Q8NGH3 330 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 USMG5Q96IX5 58 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 KCNS1Q96KK3 526 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 GPR82Q96P67 336 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 KLK15Q9H2R5 256 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 SERTAD4Q9NUC0 356 aa11.17□□□□□ -0.62
HDAC6-213ENST00000462730 CLPSL1A2RUU4 121 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 LTAP01374 205 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 TCL1AP56279 114 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 CFHR3Q02985 330 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 PRR27Q6MZM9 219 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 Q86TA4 180 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 SMAD5-AS1Q9Y6J3 95 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 TRAV8-1A0A0A6YYK1 113 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 SMIM27A0A1W2PRY6 76 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 ZNF207O43670 478 aaKnown RBP11.16□□□□□ -0.62
HDAC6-213ENST00000462730 IGLV1-40P01703 118 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 IGHV3-11P01762 117 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 KRTDAPP60985 99 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 KIAA1644Q3SXP7 199 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 LCNL1Q6ZST4 164 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 Q8N976 141 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 SMIM12Q96EX1 92 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 RCHY1Q96PM5 261 aa11.16□□□□□ -0.62
HDAC6-213ENST00000462730 METTL26Q96S19 204 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms