RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 CCL3L1P16619 93 aa12.25□□□□□ -0.45
SSR4-206ENST00000460616 TNFAIP6P98066 277 aaPredicted RBP12.25□□□□□ -0.45
SSR4-206ENST00000460616 RITA1Q96K30 269 aa12.25□□□□□ -0.45
SSR4-206ENST00000460616 RP1L1Q8IWN7 2480 aaPredicted RBP12.24□□□□□ -0.45
SSR4-206ENST00000460616 F8W1H4 67 aa12.24□□□□□ -0.45
SSR4-206ENST00000460616 GLRXP35754 106 aa12.24□□□□□ -0.45
SSR4-206ENST00000460616 WFDC2Q14508 124 aa12.24□□□□□ -0.45
SSR4-206ENST00000460616 MRPL51Q4U2R6 128 aaKnown RBP12.24□□□□□ -0.45
SSR4-206ENST00000460616 PVRIGQ6DKI7 326 aa12.24□□□□□ -0.45
SSR4-206ENST00000460616 C18orf15Q96N68 181 aa12.24□□□□□ -0.45
SSR4-206ENST00000460616 HEATR1Q9H583 2144 aaKnown RBP12.24□□□□□ -0.45
SSR4-206ENST00000460616 RELNP78509 3460 aa12.24□□□□□ -0.45
SSR4-206ENST00000460616 FAM169BQ8N8A8 192 aa12.23□□□□□ -0.45
SSR4-206ENST00000460616 PIFOQ8TCI5 191 aa12.23□□□□□ -0.45
SSR4-206ENST00000460616 C17orf77Q96MU5 243 aa12.23□□□□□ -0.45
SSR4-206ENST00000460616 CHAC1Q9BUX1 264 aa12.23□□□□□ -0.45
SSR4-206ENST00000460616 SPANXB1Q9NS25 103 aaPredicted RBP12.23□□□□□ -0.45
SSR4-206ENST00000460616 ARFGEF3Q5TH69 2177 aa12.23□□□□□ -0.45
SSR4-206ENST00000460616 ZFYVE26Q68DK2 2539 aa12.23□□□□□ -0.45
SSR4-206ENST00000460616 TMSB15BA0A087X1C1 80 aa12.23□□□□□ -0.45
SSR4-206ENST00000460616 IGKV2D-26A0A0A0MRZ7 120 aa12.23□□□□□ -0.45
SSR4-206ENST00000460616 CKS2P33552 79 aa12.23□□□□□ -0.45
SSR4-206ENST00000460616 PHLDA1Q8WV24 401 aaPredicted RBP12.23□□□□□ -0.45
SSR4-206ENST00000460616 TRBV19A0A075B6N1 114 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 WI2-2373I1.2A0A1W2PRP0 233 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 MRGPRG-AS1Q2M3A8 158 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 PSMG4Q5JS54 123 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 FOXI2Q6ZQN5 318 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 TTTY13Q9BZ97 58 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 NHP2Q9NX24 153 aaKnown RBP12.22□□□□□ -0.45
SSR4-206ENST00000460616 TANC2Q9HCD6 1990 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 NBASA2RRP1 2371 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 ENSAO43768 121 aaKnown RBP12.22□□□□□ -0.45
SSR4-206ENST00000460616 NGBQ9NPG2 151 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 PROCRQ9UNN8 238 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 HHLA3Q9XRX5 114 aa12.22□□□□□ -0.45
SSR4-206ENST00000460616 SMKR1H3BMG3 65 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 IGHV1-46P01743 117 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 KLRB1Q12918 225 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 IGLV3-9A0A075B6K5 115 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 A0A1W2PRD5 423 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 A0A1W2PRF3 423 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 A0A1W2PRM7 423 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 NPYP01303 97 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 Q5PR19 223 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 TMEM200BQ69YZ2 307 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 CCDC144NLQ6NUI1 221 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 C8orf49Q96NF6 230 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 SPATA25Q9BR10 227 aa12.21□□□□□ -0.45
SSR4-206ENST00000460616 E9PLD3 99 aa12.2□□□□□ -0.46
SSR4-206ENST00000460616 RPL27AP46776 148 aaKnown RBP12.2□□□□□ -0.46
SSR4-206ENST00000460616 TM2D2Q9BX73 214 aa12.2□□□□□ -0.46
SSR4-206ENST00000460616 TMEM133Q9H2Q1 129 aa12.2□□□□□ -0.46
SSR4-206ENST00000460616 TRBV25-1A0A075B6N4 114 aa12.2□□□□□ -0.46
SSR4-206ENST00000460616 MC5RP33032 325 aa12.2□□□□□ -0.46
SSR4-206ENST00000460616 ZNF562Q6V9R5 426 aa12.2□□□□□ -0.46
SSR4-206ENST00000460616 SIGLEC15Q6ZMC9 328 aa12.2□□□□□ -0.46
SSR4-206ENST00000460616 CEND1Q8N111 149 aa12.2□□□□□ -0.46
SSR4-206ENST00000460616 RBP4P02753 201 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 RAB9AP51151 201 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 TEX36Q5VZQ5 186 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 TMEM108Q6UXF1 575 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 SH2D6Q7Z4S9 175 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 TMEM190Q8WZ59 177 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 SPAG8Q99932 426 aaPredicted RBP12.19□□□□□ -0.46
SSR4-206ENST00000460616 RASL11BQ9BPW5 248 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 ZMAT4Q9H898 229 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 INTS1Q8N201 2190 aaKnown RBP12.19□□□□□ -0.46
SSR4-206ENST00000460616 IGHV3-72A0A0B4J1Y9 119 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 SHISA9B4DS77 424 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 IGLL5B9A064 214 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 PRSS1P07477 247 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 ETDBQ3ZM63 59 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 LYPD1Q8N2G4 141 aa12.19□□□□□ -0.46
SSR4-206ENST00000460616 H3BMG7 143 aa12.18□□□□□ -0.46
SSR4-206ENST00000460616 CKS1BP61024 79 aa12.18□□□□□ -0.46
SSR4-206ENST00000460616 ODF1Q14990 250 aa12.18□□□□□ -0.46
SSR4-206ENST00000460616 TWIST1Q15672 202 aa12.18□□□□□ -0.46
SSR4-206ENST00000460616 K7EMI3 77 aa12.18□□□□□ -0.46
SSR4-206ENST00000460616 M0R3E3 92 aa12.18□□□□□ -0.46
SSR4-206ENST00000460616 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.17□□□□□ -0.46
SSR4-206ENST00000460616 IGKCP01834 107 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 LEPP41159 167 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 GTSCR1Q86UQ5 136 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 ZNF479Q96JC4 524 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 SHANK2-AS3Q9BTD1 123 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 SH3BGRL2Q9UJC5 107 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 RAI1Q7Z5J4 1906 aaPredicted RBP12.17□□□□□ -0.46
SSR4-206ENST00000460616 CFAP46Q8IYW2 2715 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 SH2D1AO60880 128 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 GFRALQ6UXV0 394 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 LINC00311Q8N616 119 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 ARPC1AQ92747 370 aa12.17□□□□□ -0.46
SSR4-206ENST00000460616 EVI2AP22794 236 aa12.16□□□□□ -0.46
SSR4-206ENST00000460616 SRSF1Q07955 248 aaKnown RBP eCLIP12.16□□□□□ -0.46
SSR4-206ENST00000460616 SEM1Q6ZVN7 128 aa12.16□□□□□ -0.46
SSR4-206ENST00000460616 FAM215AQ9Y5M1 114 aa12.16□□□□□ -0.46
SSR4-206ENST00000460616 PCNX1Q96RV3 2341 aa12.16□□□□□ -0.46
SSR4-206ENST00000460616 FCER1GP30273 86 aa12.16□□□□□ -0.46
SSR4-206ENST00000460616 SCGB2A2Q13296 93 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms