RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 IGHV3-64DA0A0J9YX35 117 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 A0A1W2PRS3 328 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 TCRBV3S1A0A5B6 114 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 H3BMM0 161 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 H3BT86 120 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 SDCBPO00560 298 aaPredicted RBP2.12□□□□□ -2.07
VPS8-215ENST00000460158 LECT2O14960 151 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 TRACP01848 142 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 MSMBP08118 114 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 ZNF705BP0CI00 300 aaPredicted RBP2.12□□□□□ -2.07
VPS8-215ENST00000460158 GZMBP10144 247 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 MRPS36P82909 103 aaKnown RBP2.12□□□□□ -2.07
VPS8-215ENST00000460158 CDK5R1Q15078 307 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 KISS1Q15726 138 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 MIAQ16674 131 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 UBE2SQ16763 222 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 Q6P435 159 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 C16orf47Q6ZP98 133 aaPredicted RBP2.12□□□□□ -2.07
VPS8-215ENST00000460158 SLC35E3Q7Z769 313 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 MIR7-3HGQ8N6C7 128 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 FAM216BQ8N7L0 139 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 Q8N9L7 120 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 OR4X2Q8NGF9 303 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 UBE2WQ96B02 151 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 UPK3BQ9BT76 320 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 PRO0461Q9UI25 63 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 LSM2Q9Y333 95 aaKnown RBP2.12□□□□□ -2.07
VPS8-215ENST00000460158 DNAJC15Q9Y5T4 150 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 ICOSQ9Y6W8 199 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 SERP1Q9Y6X1 66 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 AHDC1Q5TGY3 1603 aaPredicted RBP2.12□□□□□ -2.07
VPS8-215ENST00000460158 ABCC3O15438 1527 aa2.12□□□□□ -2.07
VPS8-215ENST00000460158 PLXNA2O75051 1894 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.11□□□□□ -2.07
VPS8-215ENST00000460158 TRBV6-6A0A0A6YYG2 114 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 IGHV3-73A0A0B4J1V6 119 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 A0A0B4J2C4 111 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 LOC107986453A0A1B0GWG9 222 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 MCRIP1C9JLW8 97 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 TMEM262E9PQX1 116 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 LYRM1O43325 122 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 FABP4P15090 132 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 NFYAP23511 347 aaPredicted RBP2.11□□□□□ -2.07
VPS8-215ENST00000460158 FUSP35637 526 aaKnown RBP eCLIP2.11□□□□□ -2.07
VPS8-215ENST00000460158 FOXA1P55317 472 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 DYNLT1P63172 113 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 CIRBPQ14011 172 aaKnown RBP2.11□□□□□ -2.07
VPS8-215ENST00000460158 SDIM1Q6ZPB5 146 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 ADM2Q7Z4H4 148 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 LYZL2Q7Z4W2 148 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 C10orf111Q8N326 155 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 CLDND2Q8NHS1 167 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 DIRC1Q969H9 104 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 LINC00526Q96FQ7 95 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 PKMYT1Q99640 499 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 ZNF355PQ9NSJ1 428 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 TAS2R4Q9NYW5 299 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 TEX14Q8IWB6 1497 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 COL27A1Q8IZC6 1860 aaPredicted RBP2.11□□□□□ -2.07
VPS8-215ENST00000460158 KDM5DQ9BY66 1539 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 TRPM3Q9HCF6 1732 aaPredicted RBP2.11□□□□□ -2.07
VPS8-215ENST00000460158 PTPRDP23468 1912 aa2.11□□□□□ -2.07
VPS8-215ENST00000460158 ADGRB1O14514 1584 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 PTPRTO14522 1441 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 ADGRL1O94910 1474 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 FAM24AA6NFZ4 105 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 ZNF736B4DX44 427 aaPredicted RBP2.1□□□□□ -2.07
VPS8-215ENST00000460158 OR1I1O60431 355 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 TIMM17BO60830 172 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 HYPMO75409 117 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 CD3DP04234 171 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 CRYGAP11844 174 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 SLC25A4P12235 298 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 CCL5P13501 91 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 MPV17P39210 176 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 BLCAPP62952 87 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 Q6AWC8 147 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 OR2T2Q6IF00 324 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 OR5AS1Q8N127 324 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 PFN4Q8NHR9 129 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 SMCR5Q8TEV8 140 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 PSMF1Q92530 271 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 CHCHD1Q96BP2 118 aaKnown RBP2.1□□□□□ -2.07
VPS8-215ENST00000460158 IMMP2LQ96T52 175 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 ATG5Q9H1Y0 275 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 SMDT1Q9H4I9 107 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 C16orf95Q9H693 158 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 TMEM106BQ9NUM4 274 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 BET1LQ9NYM9 111 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 OR5V1Q9UGF6 321 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 RPL26L1Q9UNX3 145 aaKnown RBP2.1□□□□□ -2.07
VPS8-215ENST00000460158 TPRKBQ9Y3C4 175 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 U3KQK5 164 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 PTPRFP10586 1907 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 WDR90Q96KV7 1748 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.1□□□□□ -2.07
VPS8-215ENST00000460158 NISCHQ9Y2I1 1504 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 KIAA1549Q9HCM3 1950 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 CABIN1Q9Y6J0 2220 aa2.1□□□□□ -2.07
VPS8-215ENST00000460158 RTEL1-TNFRSF6BF6WH68 1400 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms