RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 LGALS9BQ3B8N2 356 aa8.39□□□□□ -1.07
PDGFB-204ENST00000455790 GCSAMLQ5JQS6 135 aa8.39□□□□□ -1.07
PDGFB-204ENST00000455790 TMEM256Q8N2U0 113 aa8.39□□□□□ -1.07
PDGFB-204ENST00000455790 RNASE8Q8TDE3 154 aaKnown RBP8.39□□□□□ -1.07
PDGFB-204ENST00000455790 SLC39A9Q9NUM3 307 aa8.39□□□□□ -1.07
PDGFB-204ENST00000455790 ZNF586Q9NXT0 402 aa8.39□□□□□ -1.07
PDGFB-204ENST00000455790 PXMP4Q9Y6I8 212 aa8.39□□□□□ -1.07
PDGFB-204ENST00000455790 NACAE9PAV3 2078 aa8.39□□□□□ -1.07
PDGFB-204ENST00000455790 DYNC1H1Q14204 4646 aaKnown RBP8.39□□□□□ -1.07
PDGFB-204ENST00000455790 PRSS29PA6NIE9 313 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 F5H768 121 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 J3KRW8 73 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 S100A11P31949 105 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 RPL29P47914 159 aaKnown RBP8.38□□□□□ -1.07
PDGFB-204ENST00000455790 IFITM3Q01628 133 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 MZT2BQ6NZ67 158 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 Q6ZRG5 221 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 STX12Q86Y82 276 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 OR1L4Q8NGR5 311 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 OR10J6PQ8NGY7 276 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 C16orf74Q96GX8 76 aa8.38□□□□□ -1.07
PDGFB-204ENST00000455790 GPN1Q9HCN4 374 aaPredicted RBP8.38□□□□□ -1.07
PDGFB-204ENST00000455790 NOP10Q9NPE3 64 aaKnown RBP8.38□□□□□ -1.07
PDGFB-204ENST00000455790 NPIPB6E9PJ23 425 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 H7BYZ3 331 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 M0R3E3 92 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 NDUFB4O95168 129 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 CT45A10P0DMU9 189 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 PYYP10082 97 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 HBG1P69891 147 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 HBG2P69892 147 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 RNF212Q495C1 297 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 C15orf53Q8NAA6 179 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 THAP6Q8TBB0 222 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 TMEM263Q8WUH6 116 aaKnown RBP8.37□□□□□ -1.07
PDGFB-204ENST00000455790 PFDN5Q99471 154 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 OR5AC2Q9NZP5 309 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 DNAH11Q96DT5 4516 aa8.37□□□□□ -1.07
PDGFB-204ENST00000455790 TRBV19A0A075B6N1 114 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 UPK1BO75841 260 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 NUDT3O95989 172 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 ATP5G1P05496 136 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 ATP5G3P48201 142 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 NHLH2Q02577 135 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 ERCC8Q13216 396 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 LRRC37A5PQ49AS3 106 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 LINC00299Q6ZSB3 139 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 ENKURQ8TC29 256 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 CHAC2Q8WUX2 184 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 S100ZQ8WXG8 99 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 NPCDR1Q9BY65 106 aa8.36□□□□□ -1.07
PDGFB-204ENST00000455790 TIMM8BQ9Y5J9 83 aaPredicted RBP8.36□□□□□ -1.07
PDGFB-204ENST00000455790 PCLOQ9Y6V0 5065 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 TRAV12-3A0A0B4J271 114 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 CBY3A6NI87 242 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 H0YIZ8 118 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 ZNF253O75346 499 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 CLINT1Q14677 625 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 GUK1Q16774 197 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 ZNF493Q6ZR52 646 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 EXOC3-AS1Q8N2X6 119 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 OR5C1Q8NGR4 320 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 RNF141Q8WVD5 230 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 C20orf144Q9BQM9 153 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 SLC25A2Q9BXI2 301 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 TMEM14CQ9P0S9 112 aa8.35□□□□□ -1.07
PDGFB-204ENST00000455790 LEPP41159 167 aa8.34□□□□□ -1.07
PDGFB-204ENST00000455790 ATP6V1FQ16864 119 aa8.34□□□□□ -1.07
PDGFB-204ENST00000455790 MIR17HGQ75NE6 70 aa8.34□□□□□ -1.07
PDGFB-204ENST00000455790 LINC00612Q8N6U2 182 aa8.34□□□□□ -1.07
PDGFB-204ENST00000455790 ZNRF2Q8NHG8 242 aa8.34□□□□□ -1.07
PDGFB-204ENST00000455790 BLNKQ8WV28 456 aa8.34□□□□□ -1.07
PDGFB-204ENST00000455790 FAM167A-AS1Q96KT0 104 aa8.34□□□□□ -1.07
PDGFB-204ENST00000455790 ODF3Q96PU9 254 aa8.34□□□□□ -1.07
PDGFB-204ENST00000455790 ATG101Q9BSB4 218 aa8.34□□□□□ -1.07
PDGFB-204ENST00000455790 IGKV2-40A0A087WW87 121 aaPredicted RBP8.33□□□□□ -1.08
PDGFB-204ENST00000455790 GAGE12BA1L429 117 aa8.33□□□□□ -1.08
PDGFB-204ENST00000455790 MPDU1O75352 247 aa8.33□□□□□ -1.08
PDGFB-204ENST00000455790 GAGE7O76087 117 aa8.33□□□□□ -1.08
PDGFB-204ENST00000455790 IGKV2D-40P01614 121 aaPredicted RBP8.33□□□□□ -1.08
PDGFB-204ENST00000455790 GAGE12FP0CL80 117 aa8.33□□□□□ -1.08
PDGFB-204ENST00000455790 GAGE12GP0CL81 117 aa8.33□□□□□ -1.08
PDGFB-204ENST00000455790 GAGE12IP0CL82 117 aa8.33□□□□□ -1.08
PDGFB-204ENST00000455790 HIST1H1EP10412 219 aaKnown RBP8.33□□□□□ -1.08
PDGFB-204ENST00000455790 HOXA5P20719 270 aa8.33□□□□□ -1.08
PDGFB-204ENST00000455790 H2BFSP57053 126 aa8.33□□□□□ -1.08
PDGFB-204ENST00000455790 BTN1A1Q13410 526 aa8.33□□□□□ -1.08
PDGFB-204ENST00000455790 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
PDGFB-204ENST00000455790 LINC00588Q9Y4M8 146 aa8.33□□□□□ -1.08
PDGFB-204ENST00000455790 A6NHS1 94 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 E5RGE8 158 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 FAM3BP58499 235 aaPredicted RBP8.32□□□□□ -1.08
PDGFB-204ENST00000455790 CD300CQ08708 224 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 PDE6HQ13956 83 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 PRR9Q5T870 116 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 C1orf134Q5TEV5 83 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 Q6ZTI0 123 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 CCDC28AQ8IWP9 274 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 FAM19A4Q96LR4 140 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 NMES1Q9C002 83 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms