RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 HHLA3Q9XRX5 114 aa10.78□□□□□ -0.68
PTPRE-204ENST00000455661 TRBV25-1A0A075B6N4 114 aa10.77□□□□□ -0.69
PTPRE-204ENST00000455661 IGHV1-3A0A0C4DH29 117 aa10.77□□□□□ -0.69
PTPRE-204ENST00000455661 GAGE12HA6NDE8 117 aa10.77□□□□□ -0.69
PTPRE-204ENST00000455661 CNIH1O95406 144 aa10.77□□□□□ -0.69
PTPRE-204ENST00000455661 EVI2AP22794 236 aa10.77□□□□□ -0.69
PTPRE-204ENST00000455661 SMAGPQ0VAQ4 97 aa10.77□□□□□ -0.69
PTPRE-204ENST00000455661 ZNF562Q6V9R5 426 aa10.77□□□□□ -0.69
PTPRE-204ENST00000455661 TM2D2Q9BX73 214 aa10.77□□□□□ -0.69
PTPRE-204ENST00000455661 CTSZQ9UBR2 303 aa10.77□□□□□ -0.69
PTPRE-204ENST00000455661 TNFRSF13BO14836 293 aaPredicted RBP10.76□□□□□ -0.69
PTPRE-204ENST00000455661 ATP5LO75964 103 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 EGR2P11161 476 aaPredicted RBP10.76□□□□□ -0.69
PTPRE-204ENST00000455661 SRSF1Q07955 248 aaKnown RBP eCLIP10.76□□□□□ -0.69
PTPRE-204ENST00000455661 C22orf34Q6ZV56 151 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 COX8CQ7Z4L0 72 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 PHLDA1Q8WV24 401 aaPredicted RBP10.76□□□□□ -0.69
PTPRE-204ENST00000455661 FAM215AQ9Y5M1 114 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 TSSC4Q9Y5U2 329 aaPredicted RBP10.76□□□□□ -0.69
PTPRE-204ENST00000455661 A0A1B0GV72 72 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 LINC01546A6NGU7 62 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 K7EIM0 57 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 CDX4O14627 284 aaPredicted RBP10.76□□□□□ -0.69
PTPRE-204ENST00000455661 DPM2O94777 84 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 GOSR1O95249 250 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 ADIPOQQ15848 244 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 FOXI2Q6ZQN5 318 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 PRR25Q96S07 402 aa10.76□□□□□ -0.69
PTPRE-204ENST00000455661 VSTM5A8MXK1 200 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 E9PLD3 99 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 HLA-DRB4P13762 266 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 SRSF6Q13247 344 aaKnown RBP10.75□□□□□ -0.69
PTPRE-204ENST00000455661 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 FOXC2Q99958 501 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 TTTY13Q9BZ97 58 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 HLA-DRB4X5D2U9 266 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 IGKV2-40A0A087WW87 121 aaPredicted RBP10.75□□□□□ -0.69
PTPRE-204ENST00000455661 A0A1W2PRD5 423 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 A0A1W2PRF3 423 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 A0A1W2PRM7 423 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 IGKV2D-40P01614 121 aaPredicted RBP10.75□□□□□ -0.69
PTPRE-204ENST00000455661 KLF17Q5JT82 389 aaPredicted RBP10.75□□□□□ -0.69
PTPRE-204ENST00000455661 PRSS33Q8NF86 280 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 RAB1BQ9H0U4 201 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 SPANXB1Q9NS25 103 aaPredicted RBP10.75□□□□□ -0.69
PTPRE-204ENST00000455661 KAAG1Q9UBP8 84 aa10.75□□□□□ -0.69
PTPRE-204ENST00000455661 IGLL5B9A064 214 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 BUB1B-PAK6H3BSN5 160 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 IGLC6P0CF74 106 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 TAL2Q16559 108 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 ZC2HC1BQ5TFG8 222 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 RPEQ96AT9 228 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 ZNF479Q96JC4 524 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 RNF5Q99942 180 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 DSPP15924 2871 aaKnown RBP10.74□□□□□ -0.69
PTPRE-204ENST00000455661 PRRC2CQ9Y520 2896 aaKnown RBP10.74□□□□□ -0.69
PTPRE-204ENST00000455661 NPIPB5A8MRT5 1133 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 TNFRSF6BO95407 300 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 IGLV1-47P01700 117 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 WFDC2Q14508 124 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 RNF185Q96GF1 192 aa10.74□□□□□ -0.69
PTPRE-204ENST00000455661 TECTAO75443 2155 aa10.73□□□□□ -0.69
PTPRE-204ENST00000455661 TMEM8BA6NDV4 472 aa10.73□□□□□ -0.69
PTPRE-204ENST00000455661 SRSF2Q01130 221 aaKnown RBP10.73□□□□□ -0.69
PTPRE-204ENST00000455661 SVILO95425 2214 aa10.73□□□□□ -0.69
PTPRE-204ENST00000455661 PLCE1Q9P212 2302 aa10.73□□□□□ -0.69
PTPRE-204ENST00000455661 ORM1P02763 201 aa10.73□□□□□ -0.69
PTPRE-204ENST00000455661 TMEM158Q8WZ71 300 aa10.73□□□□□ -0.69
PTPRE-204ENST00000455661 ATP6V0BQ99437 205 aa10.73□□□□□ -0.69
PTPRE-204ENST00000455661 TMEM160Q9NX00 188 aa10.73□□□□□ -0.69
PTPRE-204ENST00000455661 RPL7P18124 248 aaKnown RBP10.72□□□□□ -0.69
PTPRE-204ENST00000455661 DEFB109BQ30KR1 87 aa10.72□□□□□ -0.69
PTPRE-204ENST00000455661 SPATA25Q9BR10 227 aa10.72□□□□□ -0.69
PTPRE-204ENST00000455661 MSRB1Q9NZV6 116 aa10.72□□□□□ -0.69
PTPRE-204ENST00000455661 ZNF80P51504 273 aaPredicted RBP10.72□□□□□ -0.69
PTPRE-204ENST00000455661 C12orf74Q32Q52 190 aa10.72□□□□□ -0.69
PTPRE-204ENST00000455661 TTC9CQ8N5M4 171 aa10.72□□□□□ -0.69
PTPRE-204ENST00000455661 MYOZ3Q8TDC0 251 aa10.72□□□□□ -0.69
PTPRE-204ENST00000455661 MFAP4P55083 255 aa10.71□□□□□ -0.69
PTPRE-204ENST00000455661 DLX1P56177 255 aa10.71□□□□□ -0.69
PTPRE-204ENST00000455661 Q8N8P6 123 aa10.71□□□□□ -0.69
PTPRE-204ENST00000455661 Q8TAT8 98 aa10.71□□□□□ -0.69
PTPRE-204ENST00000455661 CNFNQ9BYD5 112 aa10.71□□□□□ -0.69
PTPRE-204ENST00000455661 TRAV40A0A0B4J280 105 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 FABP5P3A8MUU1 101 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 H3BMG7 143 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 PRB3Q04118 309 aaPredicted RBP10.7□□□□□ -0.7
PTPRE-204ENST00000455661 GAGE13Q4V321 117 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 PLA2G2CQ5R387 149 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 ZNF502Q8TBZ5 544 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 HIST1H4GQ99525 98 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 RALYQ9UKM9 306 aaKnown RBP10.7□□□□□ -0.7
PTPRE-204ENST00000455661 ABCA1O95477 2261 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 COX7A1P24310 79 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 ETDBQ3ZM63 59 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 GFRALQ6UXV0 394 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 SPAG8Q99932 426 aaPredicted RBP10.7□□□□□ -0.7
PTPRE-204ENST00000455661 DYNLRB1Q9NP97 96 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 S4R3C0 116 aa10.7□□□□□ -0.7
PTPRE-204ENST00000455661 C16orf97H3BN30 126 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms