RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 RANP62826 216 aaKnown RBP6.81□□□□□ -1.32
RFX3-207ENST00000449190 ACTL10Q5JWF8 245 aa6.81□□□□□ -1.32
RFX3-207ENST00000449190 IGFL4Q6B9Z1 124 aa6.81□□□□□ -1.32
RFX3-207ENST00000449190 LYPD1Q8N2G4 141 aa6.81□□□□□ -1.32
RFX3-207ENST00000449190 SFT2D1Q8WV19 159 aa6.81□□□□□ -1.32
RFX3-207ENST00000449190 FXYD5Q96DB9 178 aa6.81□□□□□ -1.32
RFX3-207ENST00000449190 SAT2Q96F10 170 aaPredicted RBP6.81□□□□□ -1.32
RFX3-207ENST00000449190 WWC2-AS2Q96NR7 200 aa6.81□□□□□ -1.32
RFX3-207ENST00000449190 MAP1LC3BQ9GZQ8 125 aa6.81□□□□□ -1.32
RFX3-207ENST00000449190 ZNF331Q9NQX6 463 aaPredicted RBP6.81□□□□□ -1.32
RFX3-207ENST00000449190 PPP1R14DQ9NXH3 145 aa6.81□□□□□ -1.32
RFX3-207ENST00000449190 TRAV8-2A0A0B4J237 113 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 KNCNA6PVL3 124 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 DUSP14O95147 198 aaKnown RBP6.8□□□□□ -1.32
RFX3-207ENST00000449190 HBE1P02100 147 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 ICAM4Q14773 271 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 ZNF726P1Q15940 193 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 FOXI2Q6ZQN5 318 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 RNF182Q8N6D2 247 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 OR10J6PQ8NGY7 276 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 CMTM2Q8TAZ6 248 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 MBD3L1Q8WWY6 194 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 RPUSD4Q96CM3 377 aaKnown RBP6.8□□□□□ -1.32
RFX3-207ENST00000449190 MRPL53Q96EL3 112 aaKnown RBP6.8□□□□□ -1.32
RFX3-207ENST00000449190 WFDC10AQ9H1F0 79 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 ZMAT4Q9H898 229 aa6.8□□□□□ -1.32
RFX3-207ENST00000449190 PGPA6NDG6 321 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 ZNF705EA8MWA4 302 aaPredicted RBP6.79□□□□□ -1.32
RFX3-207ENST00000449190 SLC17A3O00476 420 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 RPL35AP18077 110 aaKnown RBP6.79□□□□□ -1.32
RFX3-207ENST00000449190 FHITP49789 147 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 PPT1P50897 306 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 APOC4P55056 127 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 FGF8P55075 233 aaPredicted RBP6.79□□□□□ -1.32
RFX3-207ENST00000449190 NUTF2P61970 127 aaKnown RBP6.79□□□□□ -1.32
RFX3-207ENST00000449190 BLOC1S1P78537 153 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 ALKAL2Q6UX46 152 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 LINC00322Q6ZN03 302 aaPredicted RBP6.79□□□□□ -1.32
RFX3-207ENST00000449190 OR4B1Q8NGF8 309 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 RXFP4Q8TDU9 374 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 ZNF503Q96F45 646 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 C20orf173Q96LM9 149 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 Q9H3A6 140 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 SAV1Q9H4B6 383 aaPredicted RBP6.79□□□□□ -1.32
RFX3-207ENST00000449190 OTORQ9NRC9 128 aa6.79□□□□□ -1.32
RFX3-207ENST00000449190 TGP01266 2768 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 A0A0J9YX75 114 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 A0A1B0GV50 99 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 UBE2CO00762 179 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 NDUFB4O95168 129 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 IFNA7P01567 189 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 IGKV3-20P01619 116 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 HLA-DRB4P13762 266 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 HLA-DMBP28068 263 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 ZNF124Q15973 351 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 HAGHQ16775 308 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 MORN3Q6PF18 240 aaPredicted RBP6.78□□□□□ -1.32
RFX3-207ENST00000449190 SSX7Q7RTT5 188 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 EXOC3-AS1Q8N2X6 119 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 SUN5Q8TC36 379 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 TM2D3Q9BRN9 247 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 NKX6-2Q9C056 277 aaPredicted RBP6.78□□□□□ -1.32
RFX3-207ENST00000449190 CSTL1Q9H114 145 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 HLA-DRB4X5D2U9 266 aa6.78□□□□□ -1.32
RFX3-207ENST00000449190 PRKDCP78527 4128 aaKnown RBP6.78□□□□□ -1.32
RFX3-207ENST00000449190 KIR2DL5BA0A0G2JN68 375 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 KIR2DL5BA0A0G2JPC4 375 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 A0A1W2PRE2 83 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 RBMY1BA6NDE4 496 aaKnown RBP6.77□□□□□ -1.33
RFX3-207ENST00000449190 RBMY1EA6NEQ0 496 aaKnown RBP6.77□□□□□ -1.33
RFX3-207ENST00000449190 ZNF705FA8MVS1 300 aaPredicted RBP6.77□□□□□ -1.33
RFX3-207ENST00000449190 H3BMM0 161 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 IFNA1P01562 189 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 SLC25A5P05141 298 aaKnown RBP6.77□□□□□ -1.33
RFX3-207ENST00000449190 RBMY1DP0C7P1 496 aaKnown RBP6.77□□□□□ -1.33
RFX3-207ENST00000449190 UBE2G2P60604 165 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 SUMO1P63165 101 aaKnown RBP6.77□□□□□ -1.33
RFX3-207ENST00000449190 HIST1H1AQ02539 215 aaPredicted RBP6.77□□□□□ -1.33
RFX3-207ENST00000449190 KIR2DL5AQ8N109 375 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 OR8A1Q8NGG7 326 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 KIR2DL5BQ8NHK3 375 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 RCHY1Q96PM5 261 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 CITED4Q96RK1 184 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 TMPRSS5Q9H3S3 457 aa6.77□□□□□ -1.33
RFX3-207ENST00000449190 TRAV1-1A0A0B4J248 108 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 F6UB75 175 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 F6UZH7 168 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 K7EQM0 130 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 M0R3E3 92 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 CNN1P51911 297 aaKnown RBP6.76□□□□□ -1.33
RFX3-207ENST00000449190 TMEM78Q5T7P6 136 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 CST9LP1Q5W188 147 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 TEX261Q6UWH6 196 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 TRPT1Q86TN4 253 aaKnown RBP6.76□□□□□ -1.33
RFX3-207ENST00000449190 ARL6IP6Q8N6S5 226 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 LINC00477Q96M19 166 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 CLUHP3Q96NS8 147 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 SPATA25Q9BR10 227 aa6.76□□□□□ -1.33
RFX3-207ENST00000449190 C1QTNF4Q9BXJ3 329 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms