RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 CT45A10P0DMU9 189 aa12.3□□□□□ -0.44
CHCHD3-203ENST00000448878 HAMPP81172 84 aa12.3□□□□□ -0.44
CHCHD3-203ENST00000448878 PPP1R1AQ13522 171 aa12.3□□□□□ -0.44
CHCHD3-203ENST00000448878 ZBTB8BQ8NAP8 495 aaPredicted RBP12.3□□□□□ -0.44
CHCHD3-203ENST00000448878 ZNF431Q8TF32 576 aaPredicted RBP12.3□□□□□ -0.44
CHCHD3-203ENST00000448878 CCDC59Q9P031 241 aaKnown RBP12.3□□□□□ -0.44
CHCHD3-203ENST00000448878 MGAT4CQ9UBM8 478 aa12.3□□□□□ -0.44
CHCHD3-203ENST00000448878 SLC17A3O00476 420 aa12.29□□□□□ -0.44
CHCHD3-203ENST00000448878 SSSCA1O60232 199 aa12.29□□□□□ -0.44
CHCHD3-203ENST00000448878 CCNKO75909 580 aa12.29□□□□□ -0.44
CHCHD3-203ENST00000448878 IGHV3-53P01767 116 aa12.29□□□□□ -0.44
CHCHD3-203ENST00000448878 METTL15P1P0C7V9 234 aa12.29□□□□□ -0.44
CHCHD3-203ENST00000448878 GCSHP23434 173 aa12.29□□□□□ -0.44
CHCHD3-203ENST00000448878 TEPPQ6URK8 271 aa12.29□□□□□ -0.44
CHCHD3-203ENST00000448878 MCFD2Q8NI22 146 aa12.29□□□□□ -0.44
CHCHD3-203ENST00000448878 LINC00854A0A1B0GVQ3 168 aa12.28□□□□□ -0.44
CHCHD3-203ENST00000448878 COX7A2P2O60397 106 aa12.28□□□□□ -0.44
CHCHD3-203ENST00000448878 TOMM5Q8N4H5 51 aa12.28□□□□□ -0.44
CHCHD3-203ENST00000448878 OR10P1Q8NGE3 313 aa12.28□□□□□ -0.44
CHCHD3-203ENST00000448878 PXMP4Q9Y6I8 212 aa12.28□□□□□ -0.44
CHCHD3-203ENST00000448878 ZNF324O75467 553 aaPredicted RBP12.27□□□□□ -0.45
CHCHD3-203ENST00000448878 ID3Q02535 119 aa12.27□□□□□ -0.45
CHCHD3-203ENST00000448878 PXDC1Q5TGL8 231 aa12.27□□□□□ -0.45
CHCHD3-203ENST00000448878 ZNF680Q8NEM1 530 aa12.27□□□□□ -0.45
CHCHD3-203ENST00000448878 LY96Q9Y6Y9 160 aa12.27□□□□□ -0.45
CHCHD3-203ENST00000448878 SCGB1D2O95969 90 aa12.26□□□□□ -0.45
CHCHD3-203ENST00000448878 AP3S2P59780 193 aa12.26□□□□□ -0.45
CHCHD3-203ENST00000448878 LYPD5Q6UWN5 251 aa12.26□□□□□ -0.45
CHCHD3-203ENST00000448878 Q6ZSN1 163 aa12.26□□□□□ -0.45
CHCHD3-203ENST00000448878 ZNF546Q86UE3 836 aa12.26□□□□□ -0.45
CHCHD3-203ENST00000448878 SLC25A21Q9BQT8 299 aaPredicted RBP12.26□□□□□ -0.45
CHCHD3-203ENST00000448878 KLF12Q9Y4X4 402 aa12.26□□□□□ -0.45
CHCHD3-203ENST00000448878 C7orf71A4D174 169 aa12.25□□□□□ -0.45
CHCHD3-203ENST00000448878 AGPAT2O15120 278 aa12.25□□□□□ -0.45
CHCHD3-203ENST00000448878 SLC25A5P05141 298 aaKnown RBP12.25□□□□□ -0.45
CHCHD3-203ENST00000448878 SMIM18P0DKX4 95 aa12.25□□□□□ -0.45
CHCHD3-203ENST00000448878 TNFSF8P32971 234 aa12.25□□□□□ -0.45
CHCHD3-203ENST00000448878 PYDC2Q56P42 97 aa12.25□□□□□ -0.45
CHCHD3-203ENST00000448878 C10orf113Q5VZT2 155 aa12.25□□□□□ -0.45
CHCHD3-203ENST00000448878 EIF4E3Q8N5X7 224 aaKnown RBP12.25□□□□□ -0.45
CHCHD3-203ENST00000448878 SMIM8Q96KF7 97 aa12.25□□□□□ -0.45
CHCHD3-203ENST00000448878 FAT1Q14517 4588 aa12.25□□□□□ -0.45
CHCHD3-203ENST00000448878 NPIPB6E9PJ23 425 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 H3BQ15 152 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 PRAF2O60831 178 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 RNASE4P34096 147 aaKnown RBP12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 ERCC8Q13216 396 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 OPCMLQ14982 345 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 MRPL23Q16540 153 aaKnown RBP12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 MORN5Q5VZ52 161 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 C11orf72Q8NBR9 251 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 C8orf49Q96NF6 230 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 ODF3Q96PU9 254 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 MSRB1Q9NZV6 116 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 PRO0255Q9UI72 69 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 HHLA3Q9XRX5 114 aa12.24□□□□□ -0.45
CHCHD3-203ENST00000448878 FNDC10F2Z333 226 aa12.23□□□□□ -0.45
CHCHD3-203ENST00000448878 K7EPK0 472 aa12.23□□□□□ -0.45
CHCHD3-203ENST00000448878 EVI2AP22794 236 aa12.23□□□□□ -0.45
CHCHD3-203ENST00000448878 BTN1A1Q13410 526 aa12.23□□□□□ -0.45
CHCHD3-203ENST00000448878 NEGR1Q7Z3B1 354 aa12.23□□□□□ -0.45
CHCHD3-203ENST00000448878 DYNC2LI1Q8TCX1 351 aa12.23□□□□□ -0.45
CHCHD3-203ENST00000448878 TMEM37Q8WXS4 190 aa12.23□□□□□ -0.45
CHCHD3-203ENST00000448878 SAT2Q96F10 170 aaPredicted RBP12.23□□□□□ -0.45
CHCHD3-203ENST00000448878 MRPL16Q9NX20 251 aaKnown RBP12.23□□□□□ -0.45
CHCHD3-203ENST00000448878 IGLV5-52A0A0A0MRZ9 124 aa12.22□□□□□ -0.45
CHCHD3-203ENST00000448878 TRAV5A0A0B4J249 113 aa12.22□□□□□ -0.45
CHCHD3-203ENST00000448878 E5RGE8 158 aa12.22□□□□□ -0.45
CHCHD3-203ENST00000448878 SPINK4O60575 86 aa12.22□□□□□ -0.45
CHCHD3-203ENST00000448878 IGLC2P0DOY2 106 aa12.22□□□□□ -0.45
CHCHD3-203ENST00000448878 CD300CQ08708 224 aa12.22□□□□□ -0.45
CHCHD3-203ENST00000448878 SLAQ13239 276 aa12.22□□□□□ -0.45
CHCHD3-203ENST00000448878 TMEM14EPQ6UXP3 125 aa12.22□□□□□ -0.45
CHCHD3-203ENST00000448878 ST6GAL2Q96JF0 529 aa12.22□□□□□ -0.45
CHCHD3-203ENST00000448878 RGS13O14921 159 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 PSCAO43653 123 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 MPDU1O75352 247 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 GPX1P07203 203 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 CRYBA4P53673 196 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 TCL1AP56279 114 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 GUK1Q16774 197 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 ANXA2RQ3ZCQ2 193 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 Q6ZRG5 221 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 SOSTQ9BQB4 213 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 LINC00467Q9BRT7 94 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 DNAJC4Q9NNZ3 241 aa12.21□□□□□ -0.45
CHCHD3-203ENST00000448878 SRRM2Q9UQ35 2752 aaKnown RBP12.21□□□□□ -0.46
CHCHD3-203ENST00000448878 FLG2Q5D862 2391 aaPredicted RBP12.2□□□□□ -0.46
CHCHD3-203ENST00000448878 TRGV4A0A0C4DH28 118 aa12.2□□□□□ -0.46
CHCHD3-203ENST00000448878 C9orf170A2RU37 121 aa12.2□□□□□ -0.46
CHCHD3-203ENST00000448878 WFDC10BQ8IUB3 73 aa12.2□□□□□ -0.46
CHCHD3-203ENST00000448878 RAB2BQ8WUD1 216 aa12.2□□□□□ -0.46
CHCHD3-203ENST00000448878 MGST2Q99735 147 aa12.2□□□□□ -0.46
CHCHD3-203ENST00000448878 GSKIPQ9P0R6 139 aa12.2□□□□□ -0.46
CHCHD3-203ENST00000448878 TP53TG3Q9ULZ0 132 aa12.2□□□□□ -0.46
CHCHD3-203ENST00000448878 MYCBP2O75592 4640 aa12.19□□□□□ -0.46
CHCHD3-203ENST00000448878 M0R3E3 92 aa12.19□□□□□ -0.46
CHCHD3-203ENST00000448878 SRIP30626 198 aa12.19□□□□□ -0.46
CHCHD3-203ENST00000448878 ARL16Q0P5N6 197 aa12.19□□□□□ -0.46
CHCHD3-203ENST00000448878 PCNPQ8WW12 178 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms