RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 WIPF2Q8TF74 440 aaPredicted RBP14.29□□□□□ -0.12
POLR1E-203ENST00000442009 NUDT11Q96G61 164 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 SRD5A3Q9H8P0 318 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 DAZ1Q9NQZ3 744 aaKnown RBP14.29□□□□□ -0.12
POLR1E-203ENST00000442009 TRAV9-1A0A075B6T8 112 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 A0A1W2PS18 150 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 C19orf71A6NCJ1 209 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 CHEK1O14757 476 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 LY6G6DO95868 133 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 RAB5BP61020 215 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 SCGB2A2Q13296 93 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 TM4SF20Q53R12 229 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 TCTEX1D4Q5JR98 221 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 LCN12Q6JVE5 192 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 Q71RC1 249 aaPredicted RBP14.29□□□□□ -0.12
POLR1E-203ENST00000442009 ZNF492Q9P255 531 aa14.29□□□□□ -0.12
POLR1E-203ENST00000442009 HIVEP1P15822 2718 aa14.28□□□□□ -0.12
POLR1E-203ENST00000442009 RNASE1P07998 156 aaKnown RBP14.28□□□□□ -0.12
POLR1E-203ENST00000442009 C8orf86Q6ZUL3 223 aa14.28□□□□□ -0.12
POLR1E-203ENST00000442009 PRNTQ86SH4 94 aa14.28□□□□□ -0.12
POLR1E-203ENST00000442009 SMPXQ9UHP9 88 aa14.28□□□□□ -0.12
POLR1E-203ENST00000442009 NSD1Q96L73 2696 aaPredicted RBP14.28□□□□□ -0.12
POLR1E-203ENST00000442009 SMIM27A0A1W2PRY6 76 aa14.27□□□□□ -0.12
POLR1E-203ENST00000442009 COX8CQ7Z4L0 72 aa14.27□□□□□ -0.12
POLR1E-203ENST00000442009 ZFP82Q8N141 532 aa14.27□□□□□ -0.12
POLR1E-203ENST00000442009 BTF3L4Q96K17 158 aa14.27□□□□□ -0.12
POLR1E-203ENST00000442009 BIN3Q9NQY0 253 aa14.27□□□□□ -0.12
POLR1E-203ENST00000442009 FBLL1A6NHQ2 334 aaKnown RBP14.27□□□□□ -0.13
POLR1E-203ENST00000442009 ZNF705FA8MVS1 300 aaPredicted RBP14.27□□□□□ -0.13
POLR1E-203ENST00000442009 CDX1P47902 265 aaPredicted RBP14.27□□□□□ -0.13
POLR1E-203ENST00000442009 MRPL53Q96EL3 112 aaKnown RBP14.27□□□□□ -0.13
POLR1E-203ENST00000442009 GRAMD2BQ96HH9 432 aa14.27□□□□□ -0.13
POLR1E-203ENST00000442009 RHPN1-AS1Q9BWJ2 59 aa14.27□□□□□ -0.13
POLR1E-203ENST00000442009 CUBNO60494 3623 aa14.26□□□□□ -0.13
POLR1E-203ENST00000442009 FLNBO75369 2602 aaKnown RBP14.26□□□□□ -0.13
POLR1E-203ENST00000442009 TRGC2P03986 189 aa14.26□□□□□ -0.13
POLR1E-203ENST00000442009 PRB4P10163 310 aaPredicted RBP14.26□□□□□ -0.13
POLR1E-203ENST00000442009 RPEL1Q2QD12 228 aa14.26□□□□□ -0.13
POLR1E-203ENST00000442009 SETD2Q9BYW2 2564 aaPredicted RBP14.26□□□□□ -0.13
POLR1E-203ENST00000442009 IGHV4OR15-8A0A075B7B6 117 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 A0A087WW49 117 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 IGKV2-40A0A087WW87 121 aaPredicted RBP14.25□□□□□ -0.13
POLR1E-203ENST00000442009 A8MWP6 167 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 LGALS9O00182 355 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 SOCS3O14543 225 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 IGKV2D-40P01614 121 aaPredicted RBP14.25□□□□□ -0.13
POLR1E-203ENST00000442009 PRR27Q6MZM9 219 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 REC114Q7Z4M0 266 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 RNF182Q8N6D2 247 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 CLEC5AQ9NY25 188 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 UFC1Q9Y3C8 167 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 TMEM213A2RRL7 107 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 RBAKDNA6NC62 111 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 ZNF705GA8MUZ8 300 aaPredicted RBP14.25□□□□□ -0.13
POLR1E-203ENST00000442009 PRAC2D3DTV9 90 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 NPIPB6E9PJ23 425 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 GATCO43716 136 aaKnown RBP14.25□□□□□ -0.13
POLR1E-203ENST00000442009 SRD5A1P18405 259 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 HILS1P60008 231 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 ZC2HC1AQ96GY0 325 aa14.25□□□□□ -0.13
POLR1E-203ENST00000442009 EDN2P20800 178 aa14.24□□□□□ -0.13
POLR1E-203ENST00000442009 VGLL1Q99990 258 aa14.24□□□□□ -0.13
POLR1E-203ENST00000442009 C16orf95Q9H693 158 aa14.24□□□□□ -0.13
POLR1E-203ENST00000442009 CA1P00915 261 aaPredicted RBP14.23□□□□□ -0.13
POLR1E-203ENST00000442009 CRIP1P50238 77 aa14.23□□□□□ -0.13
POLR1E-203ENST00000442009 CT83Q5H943 113 aa14.23□□□□□ -0.13
POLR1E-203ENST00000442009 C18orf65Q6ZTR6 163 aa14.22□□□□□ -0.13
POLR1E-203ENST00000442009 ZNF418Q8TF45 676 aaPredicted RBP14.22□□□□□ -0.13
POLR1E-203ENST00000442009 PRR25Q96S07 402 aa14.22□□□□□ -0.13
POLR1E-203ENST00000442009 ASCL2Q99929 193 aa14.22□□□□□ -0.13
POLR1E-203ENST00000442009 SETXQ7Z333 2677 aaKnown RBP14.22□□□□□ -0.13
POLR1E-203ENST00000442009 HOXD3P31249 432 aaPredicted RBP14.22□□□□□ -0.13
POLR1E-203ENST00000442009 KLF5Q13887 457 aaPredicted RBP14.22□□□□□ -0.13
POLR1E-203ENST00000442009 SAPCD1Q5SSQ6 148 aa14.22□□□□□ -0.13
POLR1E-203ENST00000442009 TSKUQ8WUA8 353 aa14.22□□□□□ -0.13
POLR1E-203ENST00000442009 C4orf3Q8WVX3 66 aa14.22□□□□□ -0.13
POLR1E-203ENST00000442009 WFDC12Q8WWY7 111 aa14.22□□□□□ -0.13
POLR1E-203ENST00000442009 FRZBQ92765 325 aa14.22□□□□□ -0.13
POLR1E-203ENST00000442009 NRN1Q9NPD7 142 aa14.22□□□□□ -0.13
POLR1E-203ENST00000442009 RPP21Q9H633 154 aaKnown RBP14.21□□□□□ -0.13
POLR1E-203ENST00000442009 HIST1H2BKO60814 126 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 HIST1H2BJP06899 126 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 HIST1H2BOP23527 126 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 HIST1H2BBP33778 126 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 HIST1H2BDP58876 126 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 HIST1H2BCP62807 126 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 HIST2H2BEQ16778 126 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 ACTL10Q5JWF8 245 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.2□□□□□ -0.14
POLR1E-203ENST00000442009 GBGT1Q8N5D6 347 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 HIST1H2BHQ93079 126 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 C16orf92Q96LL3 132 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 C20orf173Q96LM9 149 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 C8orf49Q96NF6 230 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 HIST1H2BNQ99877 126 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 HIST1H2BMQ99879 126 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 C5orf52A6NGY3 159 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 P01737 135 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 SYNJ2BPP57105 145 aa14.2□□□□□ -0.14
POLR1E-203ENST00000442009 LINC01006Q8NI28 216 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms