RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 C17orf77Q96MU5 243 aa13.01□□□□□ -0.33
CCDC188-201ENST00000439765 TMPRSS5Q9H3S3 457 aa13.01□□□□□ -0.33
CCDC188-201ENST00000439765 ZNF586Q9NXT0 402 aa13.01□□□□□ -0.33
CCDC188-201ENST00000439765 STARD9Q9P2P6 4700 aa13□□□□□ -0.33
CCDC188-201ENST00000439765 A0A087X0K7 114 aa13□□□□□ -0.33
CCDC188-201ENST00000439765 SNRPCP09234 159 aaKnown RBP13□□□□□ -0.33
CCDC188-201ENST00000439765 NBEAP1P0C6P0 100 aa13□□□□□ -0.33
CCDC188-201ENST00000439765 RAB14P61106 215 aa13□□□□□ -0.33
CCDC188-201ENST00000439765 UBE2L3P68036 154 aaKnown RBP13□□□□□ -0.33
CCDC188-201ENST00000439765 ACTL10Q5JWF8 245 aa13□□□□□ -0.33
CCDC188-201ENST00000439765 TMEM167BQ9NRX6 74 aa13□□□□□ -0.33
CCDC188-201ENST00000439765 RYR2Q92736 4967 aa13□□□□□ -0.33
CCDC188-201ENST00000439765 KIR2DL5BA0A0G2JN68 375 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 KIR2DL5BA0A0G2JPC4 375 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 SOCS3O14543 225 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 CCL20P78556 96 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 GUK1Q16774 197 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 IQCF2Q8IXL9 164 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 KIR2DL5AQ8N109 375 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 KIR2DL5BQ8NHK3 375 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 LINC00052Q96N35 136 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 SACSQ9NZJ4 4579 aa12.99□□□□□ -0.33
CCDC188-201ENST00000439765 PSMB3P49720 205 aa12.98□□□□□ -0.33
CCDC188-201ENST00000439765 MEOX2P50222 304 aa12.98□□□□□ -0.33
CCDC188-201ENST00000439765 CLLU1Q5K131 121 aa12.98□□□□□ -0.33
CCDC188-201ENST00000439765 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
CCDC188-201ENST00000439765 OVOL2Q9BRP0 275 aa12.98□□□□□ -0.33
CCDC188-201ENST00000439765 TRBV19A0A075B6N1 114 aa12.97□□□□□ -0.33
CCDC188-201ENST00000439765 H3BTX0 84 aa12.97□□□□□ -0.33
CCDC188-201ENST00000439765 ID1P41134 155 aa12.97□□□□□ -0.33
CCDC188-201ENST00000439765 DEFB1P60022 68 aa12.97□□□□□ -0.33
CCDC188-201ENST00000439765 Q6ZWC4 215 aa12.97□□□□□ -0.33
CCDC188-201ENST00000439765 TRPT1Q86TN4 253 aaKnown RBP12.97□□□□□ -0.33
CCDC188-201ENST00000439765 CSTL1Q9H114 145 aa12.97□□□□□ -0.33
CCDC188-201ENST00000439765 UBE2CO00762 179 aa12.97□□□□□ -0.33
CCDC188-201ENST00000439765 ISLRO14498 428 aa12.97□□□□□ -0.33
CCDC188-201ENST00000439765 CA1P00915 261 aaPredicted RBP12.97□□□□□ -0.33
CCDC188-201ENST00000439765 PDE6HQ13956 83 aa12.97□□□□□ -0.33
CCDC188-201ENST00000439765 C16orf92Q96LL3 132 aa12.97□□□□□ -0.33
CCDC188-201ENST00000439765 ZNF253O75346 499 aa12.96□□□□□ -0.34
CCDC188-201ENST00000439765 NDUFB4O95168 129 aa12.96□□□□□ -0.34
CCDC188-201ENST00000439765 PPT1P50897 306 aa12.96□□□□□ -0.34
CCDC188-201ENST00000439765 PMS2P11Q13670 270 aa12.96□□□□□ -0.34
CCDC188-201ENST00000439765 GDF5OSQ5U4N7 250 aa12.96□□□□□ -0.34
CCDC188-201ENST00000439765 SLC17A3O00476 420 aa12.95□□□□□ -0.34
CCDC188-201ENST00000439765 SPRY2O43597 315 aa12.95□□□□□ -0.34
CCDC188-201ENST00000439765 ZFAND6Q6FIF0 208 aa12.95□□□□□ -0.34
CCDC188-201ENST00000439765 C20orf173Q96LM9 149 aa12.95□□□□□ -0.34
CCDC188-201ENST00000439765 LCE6AA0A183 80 aa12.94□□□□□ -0.34
CCDC188-201ENST00000439765 RANP62826 216 aaKnown RBP12.94□□□□□ -0.34
CCDC188-201ENST00000439765 PSG9Q00887 426 aa12.94□□□□□ -0.34
CCDC188-201ENST00000439765 SAMD13Q5VXD3 122 aa12.94□□□□□ -0.34
CCDC188-201ENST00000439765 IGFL4Q6B9Z1 124 aa12.94□□□□□ -0.34
CCDC188-201ENST00000439765 LYPD1Q8N2G4 141 aa12.94□□□□□ -0.34
CCDC188-201ENST00000439765 RNF182Q8N6D2 247 aa12.94□□□□□ -0.34
CCDC188-201ENST00000439765 SLC50A1Q9BRV3 221 aa12.94□□□□□ -0.34
CCDC188-201ENST00000439765 ZNF331Q9NQX6 463 aaPredicted RBP12.94□□□□□ -0.34
CCDC188-201ENST00000439765 GNG13Q9P2W3 67 aa12.94□□□□□ -0.34
CCDC188-201ENST00000439765 TP53TG1Q9Y2A0 90 aa12.94□□□□□ -0.34
CCDC188-201ENST00000439765 TRAV8-2A0A0B4J237 113 aa12.93□□□□□ -0.34
CCDC188-201ENST00000439765 A0A1W2PRE2 83 aa12.93□□□□□ -0.34
CCDC188-201ENST00000439765 HLA-DRB4P13762 266 aa12.93□□□□□ -0.34
CCDC188-201ENST00000439765 UBE2G2P60604 165 aa12.93□□□□□ -0.34
CCDC188-201ENST00000439765 RNF183Q96D59 192 aa12.93□□□□□ -0.34
CCDC188-201ENST00000439765 MANBALQ9NQG1 85 aa12.93□□□□□ -0.34
CCDC188-201ENST00000439765 ARL2-SNX15V9GYD0 113 aa12.93□□□□□ -0.34
CCDC188-201ENST00000439765 HLA-DRB4X5D2U9 266 aa12.93□□□□□ -0.34
CCDC188-201ENST00000439765 LYSTQ99698 3801 aa12.93□□□□□ -0.34
CCDC188-201ENST00000439765 FAM74A7A6NL05 159 aa12.92□□□□□ -0.34
CCDC188-201ENST00000439765 F6UB75 175 aa12.92□□□□□ -0.34
CCDC188-201ENST00000439765 H3BMM0 161 aa12.92□□□□□ -0.34
CCDC188-201ENST00000439765 PAGE4O60829 102 aa12.92□□□□□ -0.34
CCDC188-201ENST00000439765 IGKV3-20P01619 116 aa12.92□□□□□ -0.34
CCDC188-201ENST00000439765 Q9H3A6 140 aa12.92□□□□□ -0.34
CCDC188-201ENST00000439765 YTHDF2Q9Y5A9 579 aaKnown RBP12.92□□□□□ -0.34
CCDC188-201ENST00000439765 PGPA6NDG6 321 aa12.91□□□□□ -0.34
CCDC188-201ENST00000439765 IFNA1P01562 189 aa12.91□□□□□ -0.34
CCDC188-201ENST00000439765 GIG44P09565 113 aaPredicted RBP12.91□□□□□ -0.34
CCDC188-201ENST00000439765 FOXI2Q6ZQN5 318 aa12.91□□□□□ -0.34
CCDC188-201ENST00000439765 EXOC3-AS1Q8N2X6 119 aa12.91□□□□□ -0.34
CCDC188-201ENST00000439765 SAV1Q9H4B6 383 aaPredicted RBP12.91□□□□□ -0.34
CCDC188-201ENST00000439765 AAMDCQ9H7C9 122 aa12.91□□□□□ -0.34
CCDC188-201ENST00000439765 OTORQ9NRC9 128 aa12.91□□□□□ -0.34
CCDC188-201ENST00000439765 CLEC5AQ9NY25 188 aa12.91□□□□□ -0.34
CCDC188-201ENST00000439765 HLA-DMBP28068 263 aa12.91□□□□□ -0.34
CCDC188-201ENST00000439765 SUMO1P63165 101 aaKnown RBP12.91□□□□□ -0.34
CCDC188-201ENST00000439765 ICAM4Q14773 271 aa12.91□□□□□ -0.34
CCDC188-201ENST00000439765 CST9LP1Q5W188 147 aa12.91□□□□□ -0.34
CCDC188-201ENST00000439765 NKX6-2Q9C056 277 aaPredicted RBP12.91□□□□□ -0.34
CCDC188-201ENST00000439765 PRB4P10163 310 aaPredicted RBP12.9□□□□□ -0.34
CCDC188-201ENST00000439765 PSG3Q16557 428 aa12.9□□□□□ -0.34
CCDC188-201ENST00000439765 MORN3Q6PF18 240 aaPredicted RBP12.9□□□□□ -0.34
CCDC188-201ENST00000439765 ZNF738Q8NE65 137 aa12.9□□□□□ -0.34
CCDC188-201ENST00000439765 OR4B1Q8NGF8 309 aa12.9□□□□□ -0.34
CCDC188-201ENST00000439765 IL17DQ8TAD2 202 aa12.9□□□□□ -0.34
CCDC188-201ENST00000439765 FAM210AQ96ND0 272 aa12.9□□□□□ -0.34
CCDC188-201ENST00000439765 PRELID1Q9Y255 219 aa12.9□□□□□ -0.34
CCDC188-201ENST00000439765 RBFOX3A6NFN3 312 aa12.89□□□□□ -0.35
CCDC188-201ENST00000439765 GGTLC3B5MD39 225 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms