RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 HIST1H1AQ02539 215 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-203ENST00000424443 CD300CQ08708 224 aa18.62■□□□□ 0.57
TSPAN3-203ENST00000424443 OR8A1Q8NGG7 326 aa18.62■□□□□ 0.57
TSPAN3-203ENST00000424443 CLUHP3Q96NS8 147 aa18.62■□□□□ 0.57
TSPAN3-203ENST00000424443 ZNF705DP0CH99 300 aaPredicted RBP18.61■□□□□ 0.57
TSPAN3-203ENST00000424443 ZNF705BP0CI00 300 aaPredicted RBP18.61■□□□□ 0.57
TSPAN3-203ENST00000424443 CNN1P51911 297 aaKnown RBP18.61■□□□□ 0.57
TSPAN3-203ENST00000424443 RNF183Q96D59 192 aa18.61■□□□□ 0.57
TSPAN3-203ENST00000424443 OVOL2Q9BRP0 275 aa18.61■□□□□ 0.57
TSPAN3-203ENST00000424443 PPP1R14DQ9NXH3 145 aa18.61■□□□□ 0.57
TSPAN3-203ENST00000424443 NBEAL2Q6ZNJ1 2754 aa18.6■□□□□ 0.57
TSPAN3-203ENST00000424443 SEC11BP0C7V7 166 aa18.6■□□□□ 0.57
TSPAN3-203ENST00000424443 STAG3L2P0CL84 134 aa18.6■□□□□ 0.57
TSPAN3-203ENST00000424443 STAG3L3P0CL85 134 aa18.6■□□□□ 0.57
TSPAN3-203ENST00000424443 ARL14EPLP0DKL9 152 aa18.6■□□□□ 0.57
TSPAN3-203ENST00000424443 BAP18Q8IXM2 172 aa18.6■□□□□ 0.57
TSPAN3-203ENST00000424443 EXOC3-AS1Q8N2X6 119 aa18.6■□□□□ 0.57
TSPAN3-203ENST00000424443 OR10J6PQ8NGY7 276 aa18.6■□□□□ 0.57
TSPAN3-203ENST00000424443 RANP62826 216 aaKnown RBP18.59■□□□□ 0.57
TSPAN3-203ENST00000424443 ICAM4Q14773 271 aa18.59■□□□□ 0.57
TSPAN3-203ENST00000424443 MRPL53Q96EL3 112 aaKnown RBP18.59■□□□□ 0.57
TSPAN3-203ENST00000424443 PHYHIPLQ96FC7 376 aa18.59■□□□□ 0.57
TSPAN3-203ENST00000424443 PRB4P10163 310 aaPredicted RBP18.59■□□□□ 0.57
TSPAN3-203ENST00000424443 LYPD1Q8N2G4 141 aa18.59■□□□□ 0.57
TSPAN3-203ENST00000424443 CTXND1A0A1B0GTU2 59 aa18.58■□□□□ 0.56
TSPAN3-203ENST00000424443 CXorf1O96002 111 aa18.58■□□□□ 0.56
TSPAN3-203ENST00000424443 FXYD7P58549 80 aa18.58■□□□□ 0.56
TSPAN3-203ENST00000424443 IQCF2Q8IXL9 164 aa18.58■□□□□ 0.56
TSPAN3-203ENST00000424443 XCL2Q9UBD3 114 aa18.58■□□□□ 0.56
TSPAN3-203ENST00000424443 M0R3E3 92 aa18.57■□□□□ 0.56
TSPAN3-203ENST00000424443 SLC35B3Q9H1N7 401 aa18.57■□□□□ 0.56
TSPAN3-203ENST00000424443 UMAD1C9J7I0 102 aa18.56■□□□□ 0.56
TSPAN3-203ENST00000424443 GIG44P09565 113 aaPredicted RBP18.56■□□□□ 0.56
TSPAN3-203ENST00000424443 CSN1S1P47710 185 aa18.56■□□□□ 0.56
TSPAN3-203ENST00000424443 FAM74A1Q5RGS3 127 aa18.56■□□□□ 0.56
TSPAN3-203ENST00000424443 EIF5AL1Q6IS14 154 aaKnown RBP18.56■□□□□ 0.56
TSPAN3-203ENST00000424443 STOML3Q8TAV4 291 aa18.56■□□□□ 0.56
TSPAN3-203ENST00000424443 Q9H3A6 140 aa18.56■□□□□ 0.56
TSPAN3-203ENST00000424443 PRAC2D3DTV9 90 aa18.55■□□□□ 0.56
TSPAN3-203ENST00000424443 RARRES2Q99969 163 aa18.55■□□□□ 0.56
TSPAN3-203ENST00000424443 TMEM167BQ9NRX6 74 aa18.55■□□□□ 0.56
TSPAN3-203ENST00000424443 A8MTW9 85 aa18.54■□□□□ 0.56
TSPAN3-203ENST00000424443 GCHFRP30047 84 aa18.54■□□□□ 0.56
TSPAN3-203ENST00000424443 SSX7Q7RTT5 188 aa18.54■□□□□ 0.56
TSPAN3-203ENST00000424443 OR11H2Q8NH07 326 aa18.54■□□□□ 0.56
TSPAN3-203ENST00000424443 TMED6Q8WW62 240 aa18.54■□□□□ 0.56
TSPAN3-203ENST00000424443 AMBPP02760 352 aa18.54■□□□□ 0.56
TSPAN3-203ENST00000424443 ZNF726P1Q15940 193 aa18.54■□□□□ 0.56
TSPAN3-203ENST00000424443 SLC51BQ86UW2 128 aa18.54■□□□□ 0.56
TSPAN3-203ENST00000424443 C9orf62Q8N4C0 152 aa18.54■□□□□ 0.56
TSPAN3-203ENST00000424443 AMTNQ6UX39 209 aa18.53■□□□□ 0.56
TSPAN3-203ENST00000424443 OTORQ9NRC9 128 aa18.53■□□□□ 0.56
TSPAN3-203ENST00000424443 BOLA2-SMG1P6H3BVE0 249 aa18.52■□□□□ 0.56
TSPAN3-203ENST00000424443 SPINK13Q1W4C9 94 aa18.52■□□□□ 0.56
TSPAN3-203ENST00000424443 CMTM2Q8TAZ6 248 aa18.52■□□□□ 0.56
TSPAN3-203ENST00000424443 TENM3Q9P273 2699 aa18.52■□□□□ 0.56
TSPAN3-203ENST00000424443 PGPA6NDG6 321 aa18.51■□□□□ 0.55
TSPAN3-203ENST00000424443 FAM213BQ8TBF2 198 aa18.51■□□□□ 0.55
TSPAN3-203ENST00000424443 RXFP4Q8TDU9 374 aa18.51■□□□□ 0.55
TSPAN3-203ENST00000424443 WWC2-AS2Q96NR7 200 aa18.51■□□□□ 0.55
TSPAN3-203ENST00000424443 MAP1LC3B2A6NCE7 125 aa18.5■□□□□ 0.55
TSPAN3-203ENST00000424443 M0R2Z0 102 aa18.5■□□□□ 0.55
TSPAN3-203ENST00000424443 CSNK1G2-AS1Q8NCQ2 148 aa18.5■□□□□ 0.55
TSPAN3-203ENST00000424443 MAP1LC3BQ9GZQ8 125 aa18.5■□□□□ 0.55
TSPAN3-203ENST00000424443 HUWE1Q7Z6Z7 4374 aaKnown RBP18.5■□□□□ 0.55
TSPAN3-203ENST00000424443 NPIPB6E9PJ23 425 aa18.49■□□□□ 0.55
TSPAN3-203ENST00000424443 FGF8P55075 233 aaPredicted RBP18.49■□□□□ 0.55
TSPAN3-203ENST00000424443 DPPA3Q6W0C5 159 aa18.49■□□□□ 0.55
TSPAN3-203ENST00000424443 TSPOP30536 169 aa18.49■□□□□ 0.55
TSPAN3-203ENST00000424443 FHITP49789 147 aa18.49■□□□□ 0.55
TSPAN3-203ENST00000424443 SUN5Q8TC36 379 aa18.49■□□□□ 0.55
TSPAN3-203ENST00000424443 LINC00477Q96M19 166 aa18.49■□□□□ 0.55
TSPAN3-203ENST00000424443 GOLT1BQ9Y3E0 138 aa18.49■□□□□ 0.55
TSPAN3-203ENST00000424443 IGHV3OR16-12A0A075B7B8 117 aa18.48■□□□□ 0.55
TSPAN3-203ENST00000424443 IGKV2-40A0A087WW87 121 aaPredicted RBP18.48■□□□□ 0.55
TSPAN3-203ENST00000424443 IGKV2D-40P01614 121 aaPredicted RBP18.48■□□□□ 0.55
TSPAN3-203ENST00000424443 CDKN1BP46527 198 aa18.48■□□□□ 0.55
TSPAN3-203ENST00000424443 TMEM78Q5T7P6 136 aa18.48■□□□□ 0.55
TSPAN3-203ENST00000424443 IGF2BP2-AS1Q96M15 143 aa18.48■□□□□ 0.55
TSPAN3-203ENST00000424443 PLA2G2EQ9NZK7 142 aa18.48■□□□□ 0.55
TSPAN3-203ENST00000424443 RPH3ALQ9UNE2 315 aa18.48■□□□□ 0.55
TSPAN3-203ENST00000424443 INSP01308 110 aa18.47■□□□□ 0.55
TSPAN3-203ENST00000424443 NKX2-5P52952 324 aaPredicted RBP18.47■□□□□ 0.55
TSPAN3-203ENST00000424443 ERCC8Q13216 396 aa18.47■□□□□ 0.55
TSPAN3-203ENST00000424443 TMEM208Q9BTX3 173 aa18.47■□□□□ 0.55
TSPAN3-203ENST00000424443 STAB2Q8WWQ8 2551 aa18.46■□□□□ 0.55
TSPAN3-203ENST00000424443 SLC25A5P05141 298 aaKnown RBP18.46■□□□□ 0.55
TSPAN3-203ENST00000424443 RAB5CP51148 216 aa18.46■□□□□ 0.55
TSPAN3-203ENST00000424443 SFT2D1Q8WV19 159 aa18.46■□□□□ 0.55
TSPAN3-203ENST00000424443 TMPRSS5Q9H3S3 457 aa18.46■□□□□ 0.55
TSPAN3-203ENST00000424443 TRAV12-2A0A075B6T6 113 aa18.45■□□□□ 0.54
TSPAN3-203ENST00000424443 ZNF705EA8MWA4 302 aaPredicted RBP18.45■□□□□ 0.54
TSPAN3-203ENST00000424443 CT45A10P0DMU9 189 aa18.45■□□□□ 0.54
TSPAN3-203ENST00000424443 LEPP41159 167 aa18.45■□□□□ 0.54
TSPAN3-203ENST00000424443 C9orf47Q6ZRZ4 202 aa18.45■□□□□ 0.54
TSPAN3-203ENST00000424443 ODF3Q96PU9 254 aa18.45■□□□□ 0.54
TSPAN3-203ENST00000424443 EDA2RQ9HAV5 297 aa18.45■□□□□ 0.54
TSPAN3-203ENST00000424443 A0A0J9YWU9 116 aa18.44■□□□□ 0.54
TSPAN3-203ENST00000424443 DIRC3C9JPN6 131 aa18.44■□□□□ 0.54
TSPAN3-203ENST00000424443 H2AFB1P0C5Y9 115 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms