RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 APC2O95996 2303 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 H3BMG7 143 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 GATA1P15976 413 aaPredicted RBP13.13□□□□□ -0.31
PKP4-204ENST00000421462 COX7A1P24310 79 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 MRGPRG-AS1Q2M3A8 158 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 ARPC1AQ92747 370 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 CHAC1Q9BUX1 264 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 SPTBN1Q01082 2364 aaKnown RBP13.13□□□□□ -0.31
PKP4-204ENST00000421462 IGHV3-35A0A0C4DH35 117 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 NDUFB3O43676 98 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 SH2D1AO60880 128 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 FOXC2Q99958 501 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 SCNM1Q9BWG6 230 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 ACACAQ13085 2346 aa13.13□□□□□ -0.31
PKP4-204ENST00000421462 IGLV3-9A0A075B6K5 115 aa13.12□□□□□ -0.31
PKP4-204ENST00000421462 UBALD2Q8IYN6 164 aa13.12□□□□□ -0.31
PKP4-204ENST00000421462 GATA4P43694 442 aa13.12□□□□□ -0.31
PKP4-204ENST00000421462 SFTA2Q6UW10 78 aa13.12□□□□□ -0.31
PKP4-204ENST00000421462 NBASA2RRP1 2371 aa13.12□□□□□ -0.31
PKP4-204ENST00000421462 IGHV3-23P01764 117 aa13.11□□□□□ -0.31
PKP4-204ENST00000421462 ORM1P02763 201 aa13.11□□□□□ -0.31
PKP4-204ENST00000421462 SIGLEC15Q6ZMC9 328 aa13.11□□□□□ -0.31
PKP4-204ENST00000421462 IGKV1-17P01599 117 aa13.11□□□□□ -0.31
PKP4-204ENST00000421462 LINC00574Q9H8X3 128 aa13.11□□□□□ -0.31
PKP4-204ENST00000421462 LRBAP50851 2863 aa13.11□□□□□ -0.31
PKP4-204ENST00000421462 INS-IGF2F8WCM5 200 aa13.11□□□□□ -0.31
PKP4-204ENST00000421462 ZC2HC1BQ5TFG8 222 aa13.11□□□□□ -0.31
PKP4-204ENST00000421462 VGLL1Q99990 258 aa13.11□□□□□ -0.31
PKP4-204ENST00000421462 SH3BGRL2Q9UJC5 107 aa13.11□□□□□ -0.31
PKP4-204ENST00000421462 SIGLEC9Q9Y336 463 aa13.1□□□□□ -0.31
PKP4-204ENST00000421462 SPAARA0A1B0GVQ0 90 aa13.1□□□□□ -0.31
PKP4-204ENST00000421462 GAGE12HA6NDE8 117 aa13.1□□□□□ -0.31
PKP4-204ENST00000421462 PPP1R27Q86WC6 154 aa13.1□□□□□ -0.31
PKP4-204ENST00000421462 AAMDCQ9H7C9 122 aa13.1□□□□□ -0.31
PKP4-204ENST00000421462 PRSS33Q8NF86 280 aa13.09□□□□□ -0.31
PKP4-204ENST00000421462 TRBV25-1A0A075B6N4 114 aa13.09□□□□□ -0.31
PKP4-204ENST00000421462 EGR2P11161 476 aaPredicted RBP13.09□□□□□ -0.31
PKP4-204ENST00000421462 MC5RP33032 325 aa13.09□□□□□ -0.31
PKP4-204ENST00000421462 ATP5G2Q06055 141 aa13.09□□□□□ -0.31
PKP4-204ENST00000421462 CD40P25942 277 aa13.09□□□□□ -0.31
PKP4-204ENST00000421462 HLA-DMBP28068 263 aa13.09□□□□□ -0.31
PKP4-204ENST00000421462 INSL3P51460 131 aa13.09□□□□□ -0.31
PKP4-204ENST00000421462 CTSZQ9UBR2 303 aa13.09□□□□□ -0.31
PKP4-204ENST00000421462 DEFB109BQ30KR1 87 aa13.08□□□□□ -0.32
PKP4-204ENST00000421462 C16orf54Q6UWD8 224 aa13.08□□□□□ -0.32
PKP4-204ENST00000421462 DPF1Q92782 380 aa13.08□□□□□ -0.32
PKP4-204ENST00000421462 TRAV17A0A0B4J275 112 aa13.08□□□□□ -0.32
PKP4-204ENST00000421462 TRAV40A0A0B4J280 105 aa13.08□□□□□ -0.32
PKP4-204ENST00000421462 RNF125Q96EQ8 232 aa13.08□□□□□ -0.32
PKP4-204ENST00000421462 COL27A1Q8IZC6 1860 aaPredicted RBP13.07□□□□□ -0.32
PKP4-204ENST00000421462 WI2-2373I1.2A0A1W2PRP0 233 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 SIVA1O15304 175 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 SHANK2-AS3Q9BTD1 123 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 A0A1B0GW15 77 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 FAM169BQ8N8A8 192 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 ZNF479Q96JC4 524 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 MAP1LC3AQ9H492 121 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 TMEM8BA6NDV4 472 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 FTH1P19P0C7X4 201 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 ZNF80P51504 273 aaPredicted RBP13.07□□□□□ -0.32
PKP4-204ENST00000421462 TEX36Q5VZQ5 186 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 TNFRSF14Q92956 283 aa13.07□□□□□ -0.32
PKP4-204ENST00000421462 IGKCP01834 107 aa13.06□□□□□ -0.32
PKP4-204ENST00000421462 SMIM17P0DL12 118 aa13.06□□□□□ -0.32
PKP4-204ENST00000421462 IGHV1-8P0DP01 117 aa13.06□□□□□ -0.32
PKP4-204ENST00000421462 CD59P13987 128 aa13.06□□□□□ -0.32
PKP4-204ENST00000421462 Q6AWC8 147 aa13.06□□□□□ -0.32
PKP4-204ENST00000421462 ZNF562Q6V9R5 426 aa13.06□□□□□ -0.32
PKP4-204ENST00000421462 ZNF493Q6ZR52 646 aa13.06□□□□□ -0.32
PKP4-204ENST00000421462 TMEM158Q8WZ71 300 aa13.06□□□□□ -0.32
PKP4-204ENST00000421462 TEX22C9J3V5 150 aa13.06□□□□□ -0.32
PKP4-204ENST00000421462 TMEM14CQ9P0S9 112 aa13.06□□□□□ -0.32
PKP4-204ENST00000421462 LYNX1G3V0Z9 82 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 NDUFA3O95167 84 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 LYNX1P0DP58 116 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 ODF1Q14990 250 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 TMEM30BQ3MIR4 351 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 CD300EQ496F6 205 aaPredicted RBP13.05□□□□□ -0.32
PKP4-204ENST00000421462 MAPKAPK5-AS1Q8N8E1 139 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 ZNF491Q8N8L2 437 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 KLK15Q9H2R5 256 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 C17orf100A8MU93 164 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 I3L2K1 104 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 LOXP28300 417 aaPredicted RBP13.05□□□□□ -0.32
PKP4-204ENST00000421462 HIST1H4GQ99525 98 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 SPAG8Q99932 426 aaPredicted RBP13.05□□□□□ -0.32
PKP4-204ENST00000421462 HHLA3Q9XRX5 114 aa13.05□□□□□ -0.32
PKP4-204ENST00000421462 C19orf67A6NJJ6 358 aa13.04□□□□□ -0.32
PKP4-204ENST00000421462 C16orf97H3BN30 126 aa13.04□□□□□ -0.32
PKP4-204ENST00000421462 HOXB4P17483 251 aaPredicted RBP13.04□□□□□ -0.32
PKP4-204ENST00000421462 BDP1A6H8Y1 2624 aa13.04□□□□□ -0.32
PKP4-204ENST00000421462 RAB9AP51151 201 aa13.04□□□□□ -0.32
PKP4-204ENST00000421462 CEND1Q8N111 149 aa13.04□□□□□ -0.32
PKP4-204ENST00000421462 TRAV26-2A0A0B4J265 109 aa13.03□□□□□ -0.32
PKP4-204ENST00000421462 H3BRN7 92 aa13.03□□□□□ -0.32
PKP4-204ENST00000421462 CCDC144NLQ6NUI1 221 aa13.03□□□□□ -0.32
PKP4-204ENST00000421462 RPEQ96AT9 228 aa13.03□□□□□ -0.32
PKP4-204ENST00000421462 SPANXB1Q9NS25 103 aaPredicted RBP13.03□□□□□ -0.32
PKP4-204ENST00000421462 MRPL35Q9NZE8 188 aaKnown RBP13.03□□□□□ -0.32
PKP4-204ENST00000421462 IGHV1-3A0A0C4DH29 117 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms