RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 GAGE1Q13065 139 aa13.46□□□□□ -0.26
SYNGAP1-202ENST00000418600 GAGE4Q13068 117 aa13.46□□□□□ -0.26
SYNGAP1-202ENST00000418600 GAGE5Q13069 117 aa13.46□□□□□ -0.26
SYNGAP1-202ENST00000418600 GAGE13Q4V321 117 aa13.46□□□□□ -0.26
SYNGAP1-202ENST00000418600 C1orf194Q5T5A4 169 aa13.46□□□□□ -0.26
SYNGAP1-202ENST00000418600 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 CTAG1AP78358 180 aa13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 SHANK2-AS3Q9BTD1 123 aa13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 TRAV2A0A0B4J234 112 aa13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 WISP2O76076 250 aa13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 IGKCP01834 107 aa13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 Q6ZS49 121 aa13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 LINC00614P0C842 121 aa13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 M0R2P5 195 aa13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 MMP23AO75900 390 aa13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 ZNF876PQ49A33 203 aa13.45□□□□□ -0.26
SYNGAP1-202ENST00000418600 PKIGQ9Y2B9 76 aa13.44□□□□□ -0.26
SYNGAP1-202ENST00000418600 GZMBP10144 247 aa13.44□□□□□ -0.26
SYNGAP1-202ENST00000418600 TRAV8-2A0A0B4J237 113 aa13.44□□□□□ -0.26
SYNGAP1-202ENST00000418600 LAGE3Q14657 143 aa13.44□□□□□ -0.26
SYNGAP1-202ENST00000418600 IMMP2LQ96T52 175 aa13.44□□□□□ -0.26
SYNGAP1-202ENST00000418600 DIDO1Q9BTC0 2240 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-202ENST00000418600 LAIR2Q6ISS4 152 aa13.44□□□□□ -0.26
SYNGAP1-202ENST00000418600 NIT1Q86X76 327 aa13.44□□□□□ -0.26
SYNGAP1-202ENST00000418600 TSKUQ8WUA8 353 aa13.44□□□□□ -0.26
SYNGAP1-202ENST00000418600 IGFBPL1Q8WX77 278 aa13.44□□□□□ -0.26
SYNGAP1-202ENST00000418600 A0A0J9YY99 117 aa13.43□□□□□ -0.26
SYNGAP1-202ENST00000418600 CDKN1BP46527 198 aa13.43□□□□□ -0.26
SYNGAP1-202ENST00000418600 Q6YL49 198 aa13.43□□□□□ -0.26
SYNGAP1-202ENST00000418600 FOXI2Q6ZQN5 318 aa13.43□□□□□ -0.26
SYNGAP1-202ENST00000418600 Q8TAT8 98 aa13.43□□□□□ -0.26
SYNGAP1-202ENST00000418600 GFI1Q99684 422 aa13.43□□□□□ -0.26
SYNGAP1-202ENST00000418600 A0A096LPF7 62 aa13.43□□□□□ -0.26
SYNGAP1-202ENST00000418600 RNF183Q96D59 192 aa13.43□□□□□ -0.26
SYNGAP1-202ENST00000418600 TEX43Q6ZNM6 134 aa13.43□□□□□ -0.26
SYNGAP1-202ENST00000418600 IGHV4OR15-8A0A075B7B6 117 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 A0A087WW49 117 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 IGLV2-23P01705 113 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 C14orf144Q96I85 54 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 NDUFA4L2Q9NRX3 87 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 WDR83OSQ9Y284 106 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 RPL23P62829 140 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 PRR31Q5SQ13 230 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 LYPD1Q8N2G4 141 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 SSBP4Q9BWG4 385 aaPredicted RBP13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 TPSG1Q9NRR2 321 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 IGKV1-5P01602 117 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 WIPF2Q8TF74 440 aaPredicted RBP13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 ZNF524Q96C55 264 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 CSTL1Q9H114 145 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 GNB1LQ9BYB4 327 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 C5orf56Q8N8D9 126 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 VOPP1Q96AW1 172 aa13.42□□□□□ -0.26
SYNGAP1-202ENST00000418600 IGHV3-16A0A0C4DH30 117 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 C15orf65H3BRN8 121 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 FHL1Q13642 323 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 PRR25Q96S07 402 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 MGST2Q99735 147 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 TRAV12-2A0A075B6T6 113 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 IGHV1OR15-1A0A075B7D0 117 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 TRAV8-4A0A0B4J246 113 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 TNFRSF13BO14836 293 aaPredicted RBP13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 APRG1Q8IVJ8 170 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 TRBV25-1A0A075B6N4 114 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 RHODO00212 210 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 TMEM256Q8N2U0 113 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 SIRPDQ9H106 197 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 RNASE7Q9H1E1 156 aaKnown RBP13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 GVINP1Q7Z2Y8 2422 aa13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 SSBP2P81877 361 aaPredicted RBP13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 RPP25LQ8N5L8 163 aaKnown RBP13.41□□□□□ -0.26
SYNGAP1-202ENST00000418600 GFI1BQ5VTD9 330 aa13.4□□□□□ -0.26
SYNGAP1-202ENST00000418600 VCYO14598 125 aa13.4□□□□□ -0.26
SYNGAP1-202ENST00000418600 RNF138Q8WVD3 245 aa13.4□□□□□ -0.26
SYNGAP1-202ENST00000418600 IGLL5B9A064 214 aa13.4□□□□□ -0.26
SYNGAP1-202ENST00000418600 ERG28Q9UKR5 140 aa13.4□□□□□ -0.26
SYNGAP1-202ENST00000418600 SNAI2O43623 268 aa13.4□□□□□ -0.26
SYNGAP1-202ENST00000418600 ATP6V0BQ99437 205 aa13.4□□□□□ -0.26
SYNGAP1-202ENST00000418600 TMEM170AQ8WVE7 144 aa13.4□□□□□ -0.27
SYNGAP1-202ENST00000418600 SH2D1AO60880 128 aa13.39□□□□□ -0.27
SYNGAP1-202ENST00000418600 ID3Q02535 119 aa13.39□□□□□ -0.27
SYNGAP1-202ENST00000418600 C6orf226Q5I0X4 101 aa13.39□□□□□ -0.27
SYNGAP1-202ENST00000418600 NPBQ8NG41 125 aa13.39□□□□□ -0.27
SYNGAP1-202ENST00000418600 CFHR4Q92496 578 aa13.39□□□□□ -0.27
SYNGAP1-202ENST00000418600 HEATR5BQ9P2D3 2071 aa13.39□□□□□ -0.27
SYNGAP1-202ENST00000418600 TMEM89A2RUT3 159 aa13.39□□□□□ -0.27
SYNGAP1-202ENST00000418600 IGKV2D-24A0A075B6R9 120 aa13.39□□□□□ -0.27
SYNGAP1-202ENST00000418600 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
SYNGAP1-202ENST00000418600 NOP10Q9NPE3 64 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-202ENST00000418600 LAMTOR3Q9UHA4 124 aa13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 A0A087WWL8 130 aa13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 RASL11AQ6T310 242 aa13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 NHP2Q9NX24 153 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 IFI27L1Q96BM0 104 aa13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 ICOSQ9Y6W8 199 aa13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 LDLRAD4O15165 306 aa13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 IGLL1P15814 213 aa13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 C21orf62-AS1Q17RA5 79 aa13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 SRSF2Q01130 221 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 FAM19A2Q8N3H0 131 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms