RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 TMED6Q8WW62 240 aa8.75□□□□□ -1.01
ATG4B-207ENST00000415107 MBD3L1Q8WWY6 194 aa8.75□□□□□ -1.01
ATG4B-207ENST00000415107 ODF3Q96PU9 254 aa8.75□□□□□ -1.01
ATG4B-207ENST00000415107 SPATA25Q9BR10 227 aa8.75□□□□□ -1.01
ATG4B-207ENST00000415107 CSTL1Q9H114 145 aa8.75□□□□□ -1.01
ATG4B-207ENST00000415107 PLA2G2EQ9NZK7 142 aa8.75□□□□□ -1.01
ATG4B-207ENST00000415107 GCHFRP30047 84 aa8.74□□□□□ -1.01
ATG4B-207ENST00000415107 SULT1A2P50226 295 aa8.74□□□□□ -1.01
ATG4B-207ENST00000415107 IGFL4Q6B9Z1 124 aa8.74□□□□□ -1.01
ATG4B-207ENST00000415107 AMTNQ6UX39 209 aa8.74□□□□□ -1.01
ATG4B-207ENST00000415107 ZNF738Q8NE65 137 aa8.74□□□□□ -1.01
ATG4B-207ENST00000415107 RPUSD4Q96CM3 377 aaKnown RBP8.74□□□□□ -1.01
ATG4B-207ENST00000415107 C1QTNF4Q9BXJ3 329 aa8.74□□□□□ -1.01
ATG4B-207ENST00000415107 OTORQ9NRC9 128 aa8.74□□□□□ -1.01
ATG4B-207ENST00000415107 TRAV1-1A0A0B4J248 108 aa8.73□□□□□ -1.01
ATG4B-207ENST00000415107 A0A1W2PRE2 83 aa8.73□□□□□ -1.01
ATG4B-207ENST00000415107 RBAKDNA6NC62 111 aa8.73□□□□□ -1.01
ATG4B-207ENST00000415107 MAP1LC3B2A6NCE7 125 aa8.73□□□□□ -1.01
ATG4B-207ENST00000415107 H3BTX0 84 aa8.73□□□□□ -1.01
ATG4B-207ENST00000415107 SLC25A5P05141 298 aaKnown RBP8.73□□□□□ -1.01
ATG4B-207ENST00000415107 GIG44P09565 113 aaPredicted RBP8.73□□□□□ -1.01
ATG4B-207ENST00000415107 HLA-DMBP28068 263 aa8.73□□□□□ -1.01
ATG4B-207ENST00000415107 CNN1P51911 297 aaKnown RBP8.73□□□□□ -1.01
ATG4B-207ENST00000415107 BLNKQ8WV28 456 aa8.73□□□□□ -1.01
ATG4B-207ENST00000415107 NKX6-2Q9C056 277 aaPredicted RBP8.73□□□□□ -1.01
ATG4B-207ENST00000415107 MAP1LC3BQ9GZQ8 125 aa8.73□□□□□ -1.01
ATG4B-207ENST00000415107 Q9H3A6 140 aa8.73□□□□□ -1.01
ATG4B-207ENST00000415107 ZMAT4Q9H898 229 aa8.73□□□□□ -1.01
ATG4B-207ENST00000415107 TRBV7-9A0A0J9YWB2 115 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 NPIPB6E9PJ23 425 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 F6UB75 175 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 M0R3E3 92 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
ATG4B-207ENST00000415107 AMBPP02760 352 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 SNRPCP09234 159 aaKnown RBP8.72□□□□□ -1.01
ATG4B-207ENST00000415107 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
ATG4B-207ENST00000415107 FHITP49789 147 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 ICAM4Q14773 271 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 FAM74A1Q5RGS3 127 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 C9orf47Q6ZRZ4 202 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 EXOC3-AS1Q8N2X6 119 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 CSNK1G2-AS1Q8NCQ2 148 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 RXFP4Q8TDU9 374 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 RNF183Q96D59 192 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 PPP1R14DQ9NXH3 145 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 AGRNO00468 2067 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 COL7A1Q02388 2944 aa8.72□□□□□ -1.01
ATG4B-207ENST00000415107 SERTM2A0A1B0GWG4 89 aa8.71□□□□□ -1.02
ATG4B-207ENST00000415107 EIF3GO75821 320 aaKnown RBP eCLIP8.71□□□□□ -1.02
ATG4B-207ENST00000415107 CA1P00915 261 aaPredicted RBP8.71□□□□□ -1.02
ATG4B-207ENST00000415107 NKX2-5P52952 324 aaPredicted RBP8.71□□□□□ -1.02
ATG4B-207ENST00000415107 DEFB1P60022 68 aa8.71□□□□□ -1.02
ATG4B-207ENST00000415107 RANP62826 216 aaKnown RBP8.71□□□□□ -1.02
ATG4B-207ENST00000415107 PMS2P11Q13670 270 aa8.71□□□□□ -1.02
ATG4B-207ENST00000415107 OR10J6PQ8NGY7 276 aa8.71□□□□□ -1.02
ATG4B-207ENST00000415107 TCEAL7Q9BRU2 100 aa8.71□□□□□ -1.02
ATG4B-207ENST00000415107 ZNF705FA8MVS1 300 aaPredicted RBP8.7□□□□□ -1.02
ATG4B-207ENST00000415107 ZNF705EA8MWA4 302 aaPredicted RBP8.7□□□□□ -1.02
ATG4B-207ENST00000415107 PRAC2D3DTV9 90 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 NMBP08949 121 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 H2AFB1P0C5Y9 115 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 CSN1S1P47710 185 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 PPT1P50897 306 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 HIST1H1AQ02539 215 aaPredicted RBP8.7□□□□□ -1.02
ATG4B-207ENST00000415107 C5orf17Q8NAS9 161 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 FAM213BQ8TBF2 198 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 FAM19A4Q96LR4 140 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 LINC00477Q96M19 166 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 RCHY1Q96PM5 261 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 ASCL2Q99929 193 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 OVOL2Q9BRP0 275 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 LENEPQ9Y5L5 61 aa8.7□□□□□ -1.02
ATG4B-207ENST00000415107 FBLL1A6NHQ2 334 aaKnown RBP8.69□□□□□ -1.02
ATG4B-207ENST00000415107 GGTLC3B5MD39 225 aa8.69□□□□□ -1.02
ATG4B-207ENST00000415107 DIRC3C9JPN6 131 aa8.69□□□□□ -1.02
ATG4B-207ENST00000415107 BOLA2-SMG1P6H3BVE0 249 aa8.69□□□□□ -1.02
ATG4B-207ENST00000415107 SPRY2O43597 315 aa8.69□□□□□ -1.02
ATG4B-207ENST00000415107 HBE1P02100 147 aa8.69□□□□□ -1.02
ATG4B-207ENST00000415107 OR4B1Q8NGF8 309 aa8.69□□□□□ -1.02
ATG4B-207ENST00000415107 C20orf144Q9BQM9 153 aa8.69□□□□□ -1.02
ATG4B-207ENST00000415107 PGPA6NDG6 321 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 FAM74A7A6NL05 159 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 TEX46H3BTG2 121 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 CRXO43186 299 aaPredicted RBP8.68□□□□□ -1.02
ATG4B-207ENST00000415107 CRISP2P16562 243 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 CDKN1BP46527 198 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 FGF8P55075 233 aaPredicted RBP8.68□□□□□ -1.02
ATG4B-207ENST00000415107 DEFB135Q30KP9 77 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 ZNF705AQ6ZN79 300 aaPredicted RBP8.68□□□□□ -1.02
ATG4B-207ENST00000415107 CCDC28AQ8IWP9 274 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 CMTM2Q8TAZ6 248 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 SFT2D1Q8WV19 159 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 IGF2BP2-AS1Q96M15 143 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 NEU1Q99519 415 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 TXNDC17Q9BRA2 123 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 SLC35B3Q9H1N7 401 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 TMPRSS5Q9H3S3 457 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 U3KQK5 164 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 STAB2Q8WWQ8 2551 aa8.68□□□□□ -1.02
ATG4B-207ENST00000415107 TENM3Q9P273 2699 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms