RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 PRAC2D3DTV9 90 aa13.68□□□□□ -0.22
CXXC1-202ENST00000412036 CHEK1O14757 476 aa13.68□□□□□ -0.22
CXXC1-202ENST00000412036 RHPN1-AS1Q9BWJ2 59 aa13.68□□□□□ -0.22
CXXC1-202ENST00000412036 DEFB1P60022 68 aa13.67□□□□□ -0.22
CXXC1-202ENST00000412036 GOLT1AQ6ZVE7 132 aa13.67□□□□□ -0.22
CXXC1-202ENST00000412036 C5orf17Q8NAS9 161 aa13.67□□□□□ -0.22
CXXC1-202ENST00000412036 ZNF331Q9NQX6 463 aaPredicted RBP13.67□□□□□ -0.22
CXXC1-202ENST00000412036 SORL1Q92673 2214 aa13.67□□□□□ -0.22
CXXC1-202ENST00000412036 IGKV3-7A0A075B6H7 116 aa13.67□□□□□ -0.22
CXXC1-202ENST00000412036 S100A8P05109 93 aa13.67□□□□□ -0.22
CXXC1-202ENST00000412036 C4orf3Q8WVX3 66 aa13.67□□□□□ -0.22
CXXC1-202ENST00000412036 A0A087X0K7 114 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 TCF21O43680 179 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 KLF5Q13887 457 aaPredicted RBP13.66□□□□□ -0.22
CXXC1-202ENST00000412036 C1orf194Q5T5A4 169 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 C20orf173Q96LM9 149 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 SMPXQ9UHP9 88 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 RNF114Q9Y508 228 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 CXorf65A6NEN9 183 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 ZNF785A8K8V0 405 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 ADARB2-AS1A8MUL3 147 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 NDUFA7O95182 113 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 ATG101Q9BSB4 218 aa13.66□□□□□ -0.22
CXXC1-202ENST00000412036 SMIM6P0DI80 62 aa13.65□□□□□ -0.22
CXXC1-202ENST00000412036 CTAG1AP78358 180 aa13.65□□□□□ -0.22
CXXC1-202ENST00000412036 PDE6HQ13956 83 aa13.65□□□□□ -0.22
CXXC1-202ENST00000412036 FAM106AQ4KMX7 169 aa13.65□□□□□ -0.22
CXXC1-202ENST00000412036 KLF12Q9Y4X4 402 aa13.65□□□□□ -0.22
CXXC1-202ENST00000412036 IGKV2-40A0A087WW87 121 aaPredicted RBP13.65□□□□□ -0.22
CXXC1-202ENST00000412036 IFITM10A6NMD0 228 aa13.65□□□□□ -0.22
CXXC1-202ENST00000412036 IGKV2D-40P01614 121 aaPredicted RBP13.65□□□□□ -0.22
CXXC1-202ENST00000412036 DLX4Q92988 240 aaPredicted RBP13.65□□□□□ -0.22
CXXC1-202ENST00000412036 C9JCJ5 164 aa13.64□□□□□ -0.23
CXXC1-202ENST00000412036 DIRC3C9JPN6 131 aa13.64□□□□□ -0.23
CXXC1-202ENST00000412036 SOCS3O14543 225 aa13.64□□□□□ -0.23
CXXC1-202ENST00000412036 B4DEV8 164 aa13.64□□□□□ -0.23
CXXC1-202ENST00000412036 GNG4P50150 75 aa13.64□□□□□ -0.23
CXXC1-202ENST00000412036 TMEM183BQ1AE95 376 aa13.64□□□□□ -0.23
CXXC1-202ENST00000412036 LINC00322Q6ZN03 302 aaPredicted RBP13.64□□□□□ -0.23
CXXC1-202ENST00000412036 OR1N2Q8NGR9 330 aa13.64□□□□□ -0.23
CXXC1-202ENST00000412036 A8MWP6 167 aa13.63□□□□□ -0.23
CXXC1-202ENST00000412036 K7EMT4 169 aa13.63□□□□□ -0.23
CXXC1-202ENST00000412036 TRGC2P03986 189 aa13.63□□□□□ -0.23
CXXC1-202ENST00000412036 HOXA5P20719 270 aa13.63□□□□□ -0.23
CXXC1-202ENST00000412036 GALR1P47211 349 aa13.63□□□□□ -0.23
CXXC1-202ENST00000412036 PNRC1Q12796 327 aaPredicted RBP13.63□□□□□ -0.23
CXXC1-202ENST00000412036 REC114Q7Z4M0 266 aa13.63□□□□□ -0.23
CXXC1-202ENST00000412036 S100A7AQ86SG5 101 aa13.63□□□□□ -0.23
CXXC1-202ENST00000412036 C2orf70A6NJV1 201 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 LINC01619G3V211 115 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 S100A9P06702 114 aaKnown RBP13.62□□□□□ -0.23
CXXC1-202ENST00000412036 NDUFA6P56556 154 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 LYPD1Q8N2G4 141 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 VGLL1Q99990 258 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 NIT2Q9NQR4 276 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST1H2BKO60814 126 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST1H2BJP06899 126 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST1H2BOP23527 126 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST1H2BBP33778 126 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 CNN1P51911 297 aaKnown RBP13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST1H2BDP58876 126 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST1H2BCP62807 126 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST2H2BEQ16778 126 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.62□□□□□ -0.23
CXXC1-202ENST00000412036 GBGT1Q8N5D6 347 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST1H2BHQ93079 126 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 JMJD8Q96S16 334 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST1H2BNQ99877 126 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 HIST1H2BMQ99879 126 aa13.62□□□□□ -0.23
CXXC1-202ENST00000412036 RNASE7Q9H1E1 156 aaKnown RBP13.62□□□□□ -0.23
CXXC1-202ENST00000412036 CBLN1P23435 193 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 S100A12P80511 92 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 MLST8Q9BVC4 326 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 GSN-AS1Q9NRJ2 163 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 TMEM242Q9NWH2 141 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 LGALS9O00182 355 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 ZNF705DP0CH99 300 aaPredicted RBP13.61□□□□□ -0.23
CXXC1-202ENST00000412036 ZNF705BP0CI00 300 aaPredicted RBP13.61□□□□□ -0.23
CXXC1-202ENST00000412036 ERCC8Q13216 396 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 LCN12Q6JVE5 192 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.61□□□□□ -0.23
CXXC1-202ENST00000412036 CMTM2Q8TAZ6 248 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 GPR82Q96P67 336 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 RNF24Q9Y225 148 aa13.61□□□□□ -0.23
CXXC1-202ENST00000412036 ZNF253O75346 499 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 LTAP01374 205 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 FHL3Q13643 280 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 Q86TA4 180 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 BAGE2Q86Y30 109 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 Q8TAT8 98 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 FAM210BQ96KR6 192 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 UFC1Q9Y3C8 167 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 RPL11P62913 178 aaKnown RBP13.6□□□□□ -0.23
CXXC1-202ENST00000412036 PSG9Q00887 426 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 TCF24Q7RTU0 167 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 PRNTQ86SH4 94 aa13.6□□□□□ -0.23
CXXC1-202ENST00000412036 LINC00587B1AMM8 73 aa13.59□□□□□ -0.23
CXXC1-202ENST00000412036 MGST1P10620 155 aaKnown RBP13.59□□□□□ -0.23
CXXC1-202ENST00000412036 TAS2R60P59551 318 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms