RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 ZNF705FA8MVS1 300 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC12-203ENST00000411973 EIF3GO75821 320 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRAPPC12-203ENST00000411973 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-203ENST00000411973 CA1P00915 261 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC12-203ENST00000411973 C4BPBP20851 252 aa11.29□□□□□ -0.6
TRAPPC12-203ENST00000411973 AKR1C8PQ5T2L2 129 aa11.29□□□□□ -0.6
TRAPPC12-203ENST00000411973 OR4B1Q8NGF8 309 aa11.29□□□□□ -0.6
TRAPPC12-203ENST00000411973 OR8A1Q8NGG7 326 aa11.29□□□□□ -0.6
TRAPPC12-203ENST00000411973 STOML3Q8TAV4 291 aa11.29□□□□□ -0.6
TRAPPC12-203ENST00000411973 PRELID1Q9Y255 219 aa11.29□□□□□ -0.6
TRAPPC12-203ENST00000411973 HMGB3O15347 200 aaKnown RBP11.28□□□□□ -0.6
TRAPPC12-203ENST00000411973 SPRY2O43597 315 aa11.28□□□□□ -0.6
TRAPPC12-203ENST00000411973 CNN1P51911 297 aaKnown RBP11.28□□□□□ -0.6
TRAPPC12-203ENST00000411973 ZFP69Q49AA0 526 aa11.28□□□□□ -0.6
TRAPPC12-203ENST00000411973 AMTNQ6UX39 209 aa11.28□□□□□ -0.6
TRAPPC12-203ENST00000411973 BAP18Q8IXM2 172 aa11.28□□□□□ -0.6
TRAPPC12-203ENST00000411973 LYPD1Q8N2G4 141 aa11.28□□□□□ -0.6
TRAPPC12-203ENST00000411973 PHYHIPLQ96FC7 376 aa11.28□□□□□ -0.6
TRAPPC12-203ENST00000411973 C1QTNF4Q9BXJ3 329 aa11.28□□□□□ -0.6
TRAPPC12-203ENST00000411973 AAMDCQ9H7C9 122 aa11.28□□□□□ -0.6
TRAPPC12-203ENST00000411973 CTXND1A0A1B0GTU2 59 aa11.27□□□□□ -0.61
TRAPPC12-203ENST00000411973 PRAC2D3DTV9 90 aa11.27□□□□□ -0.61
TRAPPC12-203ENST00000411973 IGKV3-20P01619 116 aa11.27□□□□□ -0.61
TRAPPC12-203ENST00000411973 ARL14EPLP0DKL9 152 aa11.27□□□□□ -0.61
TRAPPC12-203ENST00000411973 TPT1P13693 172 aaKnown RBP11.27□□□□□ -0.61
TRAPPC12-203ENST00000411973 EXOC3-AS1Q8N2X6 119 aa11.27□□□□□ -0.61
TRAPPC12-203ENST00000411973 CSNK1G2-AS1Q8NCQ2 148 aa11.27□□□□□ -0.61
TRAPPC12-203ENST00000411973 SUN5Q8TC36 379 aa11.27□□□□□ -0.61
TRAPPC12-203ENST00000411973 UMAD1C9J7I0 102 aa11.26□□□□□ -0.61
TRAPPC12-203ENST00000411973 M0R3E3 92 aa11.26□□□□□ -0.61
TRAPPC12-203ENST00000411973 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC12-203ENST00000411973 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC12-203ENST00000411973 ZNF726P1Q15940 193 aa11.26□□□□□ -0.61
TRAPPC12-203ENST00000411973 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
TRAPPC12-203ENST00000411973 C9orf62Q8N4C0 152 aa11.26□□□□□ -0.61
TRAPPC12-203ENST00000411973 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
TRAPPC12-203ENST00000411973 CXorf1O96002 111 aa11.25□□□□□ -0.61
TRAPPC12-203ENST00000411973 GCHFRP30047 84 aa11.25□□□□□ -0.61
TRAPPC12-203ENST00000411973 RANP62826 216 aaKnown RBP11.25□□□□□ -0.61
TRAPPC12-203ENST00000411973 HIST1H1AQ02539 215 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC12-203ENST00000411973 ICAM4Q14773 271 aa11.25□□□□□ -0.61
TRAPPC12-203ENST00000411973 SLC51BQ86UW2 128 aa11.25□□□□□ -0.61
TRAPPC12-203ENST00000411973 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
TRAPPC12-203ENST00000411973 SLC35B3Q9H1N7 401 aa11.25□□□□□ -0.61
TRAPPC12-203ENST00000411973 Q9H3A6 140 aa11.25□□□□□ -0.61
TRAPPC12-203ENST00000411973 XCL2Q9UBD3 114 aa11.25□□□□□ -0.61
TRAPPC12-203ENST00000411973 EDA2RQ9HAV5 297 aa11.24□□□□□ -0.61
TRAPPC12-203ENST00000411973 OTORQ9NRC9 128 aa11.24□□□□□ -0.61
TRAPPC12-203ENST00000411973 TMEM167BQ9NRX6 74 aa11.24□□□□□ -0.61
TRAPPC12-203ENST00000411973 ZNF705EA8MWA4 302 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC12-203ENST00000411973 NPIPB6E9PJ23 425 aa11.23□□□□□ -0.61
TRAPPC12-203ENST00000411973 AMBPP02760 352 aa11.23□□□□□ -0.61
TRAPPC12-203ENST00000411973 EIF5AL1Q6IS14 154 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-203ENST00000411973 DPPA3Q6W0C5 159 aa11.23□□□□□ -0.61
TRAPPC12-203ENST00000411973 ARL6IP6Q8N6S5 226 aa11.23□□□□□ -0.61
TRAPPC12-203ENST00000411973 TMED6Q8WW62 240 aa11.23□□□□□ -0.61
TRAPPC12-203ENST00000411973 RARRES2Q99969 163 aa11.23□□□□□ -0.61
TRAPPC12-203ENST00000411973 BOLA2-SMG1P6H3BVE0 249 aa11.22□□□□□ -0.61
TRAPPC12-203ENST00000411973 PRB4P10163 310 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-203ENST00000411973 FHITP49789 147 aa11.22□□□□□ -0.61
TRAPPC12-203ENST00000411973 FXYD7P58549 80 aa11.22□□□□□ -0.61
TRAPPC12-203ENST00000411973 OR11H2Q8NH07 326 aa11.22□□□□□ -0.61
TRAPPC12-203ENST00000411973 RXFP4Q8TDU9 374 aa11.22□□□□□ -0.61
TRAPPC12-203ENST00000411973 WWC2-AS2Q96NR7 200 aa11.22□□□□□ -0.61
TRAPPC12-203ENST00000411973 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
TRAPPC12-203ENST00000411973 MAP1LC3B2A6NCE7 125 aa11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 PGPA6NDG6 321 aa11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 CRXO43186 299 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 CSN1S1P47710 185 aa11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 FAM74A1Q5RGS3 127 aa11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 C9orf47Q6ZRZ4 202 aa11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 MBD3L1Q8WWY6 194 aa11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 LINC00477Q96M19 166 aa11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 MAP1LC3BQ9GZQ8 125 aa11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 PPP1R14DQ9NXH3 145 aa11.21□□□□□ -0.61
TRAPPC12-203ENST00000411973 RBAKDNA6NC62 111 aa11.2□□□□□ -0.62
TRAPPC12-203ENST00000411973 M0R2Z0 102 aa11.2□□□□□ -0.62
TRAPPC12-203ENST00000411973 SLC25A5P05141 298 aaKnown RBP11.2□□□□□ -0.62
TRAPPC12-203ENST00000411973 CT45A10P0DMU9 189 aa11.2□□□□□ -0.62
TRAPPC12-203ENST00000411973 CDKN1BP46527 198 aa11.2□□□□□ -0.62
TRAPPC12-203ENST00000411973 RAB5CP51148 216 aa11.2□□□□□ -0.62
TRAPPC12-203ENST00000411973 ZNF705AQ6ZN79 300 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC12-203ENST00000411973 IGF2BP2-AS1Q96M15 143 aa11.2□□□□□ -0.62
TRAPPC12-203ENST00000411973 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
TRAPPC12-203ENST00000411973 IGKV2-40A0A087WW87 121 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 A0A1W2PRE2 83 aa11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 DIRC3C9JPN6 131 aa11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 IGKV2D-40P01614 121 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 TSPOP30536 169 aa11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 FGF8P55075 233 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 C1orf158Q8N1D5 194 aa11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 FAM213BQ8TBF2 198 aa11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 NEU1Q99519 415 aa11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 TMPRSS5Q9H3S3 457 aa11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 X6R8D5 127 aa11.19□□□□□ -0.62
TRAPPC12-203ENST00000411973 MIFP14174 115 aa11.18□□□□□ -0.62
TRAPPC12-203ENST00000411973 NKX2-5P52952 324 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC12-203ENST00000411973 ERCC8Q13216 396 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms