RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TAS2R60P59551 318 aa10.36□□□□□ -0.75
NIF3L1-205ENST00000409588 ZNF493Q6ZR52 646 aa10.36□□□□□ -0.75
NIF3L1-205ENST00000409588 POM121L12Q8N7R1 296 aa10.36□□□□□ -0.75
NIF3L1-205ENST00000409588 OR10J6PQ8NGY7 276 aa10.36□□□□□ -0.75
NIF3L1-205ENST00000409588 SAT2Q96F10 170 aaPredicted RBP10.36□□□□□ -0.75
NIF3L1-205ENST00000409588 SLC39A9Q9NUM3 307 aa10.36□□□□□ -0.75
NIF3L1-205ENST00000409588 M0R2Z0 102 aa10.35□□□□□ -0.75
NIF3L1-205ENST00000409588 DEFA1P59665 94 aa10.35□□□□□ -0.75
NIF3L1-205ENST00000409588 DEFA3P59666 94 aa10.35□□□□□ -0.75
NIF3L1-205ENST00000409588 DAD1P61803 113 aa10.35□□□□□ -0.75
NIF3L1-205ENST00000409588 BAXQ07812 192 aa10.35□□□□□ -0.75
NIF3L1-205ENST00000409588 OPCMLQ14982 345 aa10.35□□□□□ -0.75
NIF3L1-205ENST00000409588 MIC13Q5XKP0 118 aa10.35□□□□□ -0.75
NIF3L1-205ENST00000409588 ZNF767PQ75MW2 155 aa10.35□□□□□ -0.75
NIF3L1-205ENST00000409588 LINC01587Q99440 93 aa10.35□□□□□ -0.75
NIF3L1-205ENST00000409588 TMEM14CQ9P0S9 112 aa10.35□□□□□ -0.75
NIF3L1-205ENST00000409588 IGSF23A1L1A6 192 aa10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 INMT-MINDY4F8WBC2 141 aa10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 H7BYZ3 331 aa10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 PDE6HQ13956 83 aa10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 RNF212Q495C1 297 aa10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 MRPL53Q96EL3 112 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 ODF3Q96PU9 254 aa10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 MARVELD1Q9BSK0 173 aa10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 BATF3Q9NR55 127 aa10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 KCNIP2Q9NS61 270 aa10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 PRELID1Q9Y255 219 aa10.34□□□□□ -0.75
NIF3L1-205ENST00000409588 FGF7P21781 194 aa10.33□□□□□ -0.76
NIF3L1-205ENST00000409588 C16orf74Q96GX8 76 aa10.33□□□□□ -0.76
NIF3L1-205ENST00000409588 TRAV12-2A0A075B6T6 113 aa10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 UBE2L5PA0A1B0GUS4 154 aa10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 ZNF705GA8MUZ8 300 aaPredicted RBP10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 H3BQ15 152 aa10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 PET100P0DJ07 73 aa10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 HIST1H1EP10412 219 aaKnown RBP10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 FAM3BP58499 235 aaPredicted RBP10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 LINC00336Q6ZUF6 198 aa10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 C15orf53Q8NAA6 179 aa10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 NPCDR1Q9BY65 106 aa10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 TIMM8BQ9Y5J9 83 aaPredicted RBP10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 BIRC6Q9NR09 4857 aa10.32□□□□□ -0.76
NIF3L1-205ENST00000409588 TRBV19A0A075B6N1 114 aa10.31□□□□□ -0.76
NIF3L1-205ENST00000409588 CBY3A6NI87 242 aa10.31□□□□□ -0.76
NIF3L1-205ENST00000409588 NHLH2Q02577 135 aa10.31□□□□□ -0.76
NIF3L1-205ENST00000409588 MORN5Q5VZ52 161 aa10.31□□□□□ -0.76
NIF3L1-205ENST00000409588 CCDC28AQ8IWP9 274 aa10.31□□□□□ -0.76
NIF3L1-205ENST00000409588 BAP18Q8IXM2 172 aa10.31□□□□□ -0.76
NIF3L1-205ENST00000409588 OR5C1Q8NGR4 320 aa10.31□□□□□ -0.76
NIF3L1-205ENST00000409588 VPS13DQ5THJ4 4388 aa10.3□□□□□ -0.76
NIF3L1-205ENST00000409588 TRAV5A0A0B4J249 113 aa10.3□□□□□ -0.76
NIF3L1-205ENST00000409588 C17orf112F2Z3M2 114 aa10.3□□□□□ -0.76
NIF3L1-205ENST00000409588 LEPP41159 167 aa10.3□□□□□ -0.76
NIF3L1-205ENST00000409588 IFITM3Q01628 133 aa10.3□□□□□ -0.76
NIF3L1-205ENST00000409588 TMEM263Q8WUH6 116 aaKnown RBP10.3□□□□□ -0.76
NIF3L1-205ENST00000409588 LINC00477Q96M19 166 aa10.3□□□□□ -0.76
NIF3L1-205ENST00000409588 ZNF586Q9NXT0 402 aa10.3□□□□□ -0.76
NIF3L1-205ENST00000409588 TIMM9Q9Y5J7 89 aa10.3□□□□□ -0.76
NIF3L1-205ENST00000409588 NPIPB6E9PJ23 425 aa10.29□□□□□ -0.76
NIF3L1-205ENST00000409588 SLC17A3O00476 420 aa10.29□□□□□ -0.76
NIF3L1-205ENST00000409588 ATP5G1P05496 136 aa10.29□□□□□ -0.76
NIF3L1-205ENST00000409588 NMBP08949 121 aa10.29□□□□□ -0.76
NIF3L1-205ENST00000409588 AZU1P20160 251 aa10.29□□□□□ -0.76
NIF3L1-205ENST00000409588 ATP5G3P48201 142 aa10.29□□□□□ -0.76
NIF3L1-205ENST00000409588 LGALS9BQ3B8N2 356 aa10.29□□□□□ -0.76
NIF3L1-205ENST00000409588 MRPL32Q9BYC8 188 aaKnown RBP10.29□□□□□ -0.76
NIF3L1-205ENST00000409588 AAMDCQ9H7C9 122 aa10.29□□□□□ -0.76
NIF3L1-205ENST00000409588 PLAC8L1A1L4L8 177 aa10.28□□□□□ -0.76
NIF3L1-205ENST00000409588 SIX6O95475 246 aa10.28□□□□□ -0.76
NIF3L1-205ENST00000409588 HTN1P15515 57 aa10.28□□□□□ -0.76
NIF3L1-205ENST00000409588 HTN3P15516 51 aa10.28□□□□□ -0.76
NIF3L1-205ENST00000409588 UBE2DNLQ8IWF7 75 aa10.28□□□□□ -0.76
NIF3L1-205ENST00000409588 PPP1R1CQ8WVI7 109 aa10.28□□□□□ -0.76
NIF3L1-205ENST00000409588 PYGO2Q9BRQ0 406 aa10.28□□□□□ -0.76
NIF3L1-205ENST00000409588 WDR61Q9GZS3 305 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-205ENST00000409588 PRAC2D3DTV9 90 aa10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 SSNA1O43805 119 aa10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 SLC25A5P05141 298 aaKnown RBP10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 SNRPCP09234 159 aaKnown RBP10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 DEFB130BP0DP73 79 aa10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 DEFB130AP0DP74 79 aa10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 H2BFSP57053 126 aa10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 LRRC37A5PQ49AS3 106 aa10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 TMEM88Q6PEY1 159 aa10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 RNASE8Q8TDE3 154 aaKnown RBP10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 OR5AC2Q9NZP5 309 aa10.27□□□□□ -0.77
NIF3L1-205ENST00000409588 H0YIZ8 118 aa10.26□□□□□ -0.77
NIF3L1-205ENST00000409588 H3BTX0 84 aa10.26□□□□□ -0.77
NIF3L1-205ENST00000409588 MPC2O95563 127 aa10.26□□□□□ -0.77
NIF3L1-205ENST00000409588 PRM2P04554 102 aa10.26□□□□□ -0.77
NIF3L1-205ENST00000409588 NBEAP1P0C6P0 100 aa10.26□□□□□ -0.77
NIF3L1-205ENST00000409588 CT45A10P0DMU9 189 aa10.26□□□□□ -0.77
NIF3L1-205ENST00000409588 GFI1BQ5VTD9 330 aa10.26□□□□□ -0.77
NIF3L1-205ENST00000409588 LYPD1Q8N2G4 141 aa10.26□□□□□ -0.77
NIF3L1-205ENST00000409588 THAP6Q8TBB0 222 aa10.26□□□□□ -0.77
NIF3L1-205ENST00000409588 OR51M1Q9H341 326 aa10.26□□□□□ -0.77
NIF3L1-205ENST00000409588 TRBV7-9A0A0J9YWB2 115 aa10.25□□□□□ -0.77
NIF3L1-205ENST00000409588 NDUFB4O95168 129 aa10.25□□□□□ -0.77
NIF3L1-205ENST00000409588 IFNA5P01569 189 aa10.25□□□□□ -0.77
NIF3L1-205ENST00000409588 H2AFB1P0C5Y9 115 aa10.25□□□□□ -0.77
NIF3L1-205ENST00000409588 C9orf47Q6ZRZ4 202 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms