RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ZFAND3Q9H8U3 227 aa13.08□□□□□ -0.32
NUP50-203ENST00000407019 TCAPO15273 167 aa13.07□□□□□ -0.32
NUP50-203ENST00000407019 CLEC3BP05452 202 aa13.07□□□□□ -0.32
NUP50-203ENST00000407019 CYB5R2Q6BCY4 276 aa13.07□□□□□ -0.32
NUP50-203ENST00000407019 TRAV9-2A0A087WT02 112 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 LEPROTL1O95214 131 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 GOSR1O95249 250 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 IGHV4-39P01824 125 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 RAB9AP51151 201 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 IGFL4Q6B9Z1 124 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 TMSB15BA0A087X1C1 80 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 C20orf202A1L168 122 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 G3V318 75 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 IGHG4P01861 327 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 RPLP1P05386 114 aaKnown RBP13.06□□□□□ -0.32
NUP50-203ENST00000407019 HLA-DMBP28068 263 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 MAJINQ3KP22 176 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 LYZL1Q6UWQ5 148 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 SPATA12Q7Z6I5 190 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 C5orf56Q8N8D9 126 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 Q8TAT8 98 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 CCDC140Q96MF4 163 aa13.06□□□□□ -0.32
NUP50-203ENST00000407019 A0A087X0K7 114 aa13.05□□□□□ -0.32
NUP50-203ENST00000407019 OR5AL1P0C617 328 aa13.05□□□□□ -0.32
NUP50-203ENST00000407019 ZNF493Q6ZR52 646 aa13.05□□□□□ -0.32
NUP50-203ENST00000407019 EEF1AKMT3Q96AZ1 226 aa13.05□□□□□ -0.32
NUP50-203ENST00000407019 VGLL1Q99990 258 aa13.05□□□□□ -0.32
NUP50-203ENST00000407019 HIVEP3Q5T1R4 2406 aa13.05□□□□□ -0.32
NUP50-203ENST00000407019 LINC01548A6NM66 108 aa13.04□□□□□ -0.32
NUP50-203ENST00000407019 CRXO43186 299 aaPredicted RBP13.04□□□□□ -0.32
NUP50-203ENST00000407019 ZNF138P52744 262 aa13.04□□□□□ -0.32
NUP50-203ENST00000407019 CLEC19AQ6UXS0 136 aa13.04□□□□□ -0.32
NUP50-203ENST00000407019 Q6ZN92 141 aa13.04□□□□□ -0.32
NUP50-203ENST00000407019 SYS1-DBNDD2H3BUS1 97 aa13.04□□□□□ -0.32
NUP50-203ENST00000407019 BUB3O43684 328 aa13.04□□□□□ -0.32
NUP50-203ENST00000407019 CSN3P07498 182 aa13.04□□□□□ -0.32
NUP50-203ENST00000407019 BMI1P35226 326 aa13.04□□□□□ -0.32
NUP50-203ENST00000407019 HNRNPA3P51991 378 aaKnown RBP13.04□□□□□ -0.32
NUP50-203ENST00000407019 RPS20P60866 119 aaKnown RBP13.04□□□□□ -0.32
NUP50-203ENST00000407019 BATFQ16520 125 aa13.03□□□□□ -0.32
NUP50-203ENST00000407019 LINC00173Q6ZV60 143 aa13.03□□□□□ -0.32
NUP50-203ENST00000407019 TRBV7-1A0A0A6YYK4 115 aa13.03□□□□□ -0.32
NUP50-203ENST00000407019 PAX8Q06710 450 aa13.03□□□□□ -0.32
NUP50-203ENST00000407019 MOB4Q9Y3A3 225 aa13.03□□□□□ -0.32
NUP50-203ENST00000407019 WNK2Q9Y3S1 2297 aa13.02□□□□□ -0.32
NUP50-203ENST00000407019 CLPSL1A2RUU4 121 aa13.02□□□□□ -0.33
NUP50-203ENST00000407019 ZNF80P51504 273 aaPredicted RBP13.02□□□□□ -0.33
NUP50-203ENST00000407019 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.02□□□□□ -0.33
NUP50-203ENST00000407019 TMEM219Q86XT9 240 aa13.02□□□□□ -0.33
NUP50-203ENST00000407019 SLC50A1Q9BRV3 221 aa13.02□□□□□ -0.33
NUP50-203ENST00000407019 SPTBN1Q01082 2364 aaKnown RBP13.02□□□□□ -0.33
NUP50-203ENST00000407019 IGHV3OR16-10A0A075B7F0 116 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 TMEM213A2RRL7 107 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 OR4C46A6NHA9 309 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 IGLL1P15814 213 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 HSPB8Q9UJY1 196 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 IGHV1-69DA0A0B4J2H0 117 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 IGHV3-66A0A0C4DH42 116 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 IGHV1-69P01742 117 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 SRSF2Q01130 221 aaKnown RBP13.01□□□□□ -0.33
NUP50-203ENST00000407019 FA2HQ7L5A8 372 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 FER1L6-AS1Q8NA97 138 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 PIMREGQ9BSJ6 248 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 MAP1LC3CQ9BXW4 147 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 AP5S1Q9NUS5 200 aa13.01□□□□□ -0.33
NUP50-203ENST00000407019 ATP5G2Q06055 141 aa13□□□□□ -0.33
NUP50-203ENST00000407019 FAM104BQ5XKR9 115 aa13□□□□□ -0.33
NUP50-203ENST00000407019 PRSS3P2Q8NHM4 247 aa13□□□□□ -0.33
NUP50-203ENST00000407019 METTL26Q96S19 204 aa13□□□□□ -0.33
NUP50-203ENST00000407019 TRAV41A0A0B4J266 112 aa13□□□□□ -0.33
NUP50-203ENST00000407019 D6R8Y8 96 aa13□□□□□ -0.33
NUP50-203ENST00000407019 PET117Q6UWS5 81 aa13□□□□□ -0.33
NUP50-203ENST00000407019 TMEM191AQ9H0A3 160 aa13□□□□□ -0.33
NUP50-203ENST00000407019 U3KQK5 164 aa13□□□□□ -0.33
NUP50-203ENST00000407019 SPTBN4Q9H254 2564 aa12.99□□□□□ -0.33
NUP50-203ENST00000407019 RBAKDNA6NC62 111 aa12.99□□□□□ -0.33
NUP50-203ENST00000407019 IGLC6P0CF74 106 aa12.99□□□□□ -0.33
NUP50-203ENST00000407019 ERCC8Q13216 396 aa12.99□□□□□ -0.33
NUP50-203ENST00000407019 COL5A1-AS1Q5SY13 56 aa12.99□□□□□ -0.33
NUP50-203ENST00000407019 AMN1Q8IY45 258 aa12.99□□□□□ -0.33
NUP50-203ENST00000407019 RNF182Q8N6D2 247 aa12.99□□□□□ -0.33
NUP50-203ENST00000407019 TRAV40A0A0B4J280 105 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 IGHV4-61A0A0C4DH41 118 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 PRAC2D3DTV9 90 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 TSPOP30536 169 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 CCL19Q99731 98 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 LAMTOR2Q9Y2Q5 125 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 IGHV3OR16-13A0A075B7E8 117 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 IGHV3-74A0A0B4J1X5 117 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 MUC21A0A0G2JKD1 596 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 MUC21A0A140T8X8 626 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 FAM223BA6NKX1 122 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 FABP5P3A8MUU1 101 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
NUP50-203ENST00000407019 C19orf54Q5BKX5 351 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 MUC21Q5SSG8 566 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 FAM223AQ8IWN6 122 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 ORMDL3Q8N138 153 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 PRELID3AQ96N28 172 aa12.98□□□□□ -0.33
NUP50-203ENST00000407019 ATP6V0BQ99437 205 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms