RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TMEM262E9PQX1 116 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 NDUFB6O95139 128 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGKV1D-12P01611 117 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 SLC25A5P05141 298 aaKnown RBP2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRGC1P0CF51 173 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF705DP0CH99 300 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF705BP0CI00 300 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 NFYAP23511 347 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 SDC2P34741 201 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 RPL22P35268 128 aaKnown RBP2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 PSMB3P49720 205 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF80P51504 273 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 C1orf140Q5VVS0 124 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 AMTNQ6UX39 209 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 Q6ZS49 121 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 LINC00305Q7Z4B0 112 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 C10orf111Q8N326 155 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR4X2Q8NGF9 303 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 RPS4Y2Q8TD47 263 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 DSCR8Q96T75 97 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 AGPAT4-IT1Q9H0P7 198 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 GABARAPL1Q9H0R8 117 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF286AQ9HBT8 521 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 BCL2L10Q9HD36 194 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 CCDC167Q9P0B6 97 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 HHLA3Q9XRX5 114 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRAPPC1Q9Y5R8 145 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 ICOSQ9Y6W8 199 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 SPHKAPQ2M3C7 1700 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 NLRC5Q86WI3 1866 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 DOCK5Q9H7D0 1870 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 PPRC1Q5VV67 1664 aaKnown RBP2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 KIF13AQ9H1H9 1805 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 MYH9P35579 1960 aaKnown RBP2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 OTOFQ9HC10 1997 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 RIMBP3CA6NJZ7 1639 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 RIMBP3BA6NNM3 1639 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 RIMBP3Q9UFD9 1639 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 LAMB4A4D0S4 1761 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 RBBP6Q7Z6E9 1792 aaKnown RBP2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRAV1-1A0A0B4J248 108 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 DPRXA6NFQ7 191 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF860A6NHJ4 632 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 H3BQ85 93 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 K7ERJ3 54 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 M0R2P5 195 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 UQCRQO14949 82 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 CD3DP04234 171 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 CRYGAP11844 174 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 FABP2P12104 132 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 SNCAP37840 140 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 QRFPP83859 136 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 LY6EQ16553 131 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF660Q6AZW8 331 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 TMEM136Q6ZRR5 245 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 MON2Q7Z3U7 1717 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 MSRB3Q8IXL7 192 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 RNF182Q8N6D2 247 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 MYO5CQ9NQX4 1742 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 CACFD1Q9UGQ2 172 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 LAMTOR3Q9UHA4 124 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 LSM2Q9Y333 95 aaKnown RBP2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 NOP16Q9Y3C1 178 aaKnown RBP2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 ADGBQ8N7X0 1667 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 THSD7AQ9UPZ6 1657 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 MAPKBP1O60336 1514 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 UBR2Q8IWV8 1755 aa2.72□□□□□ -1.97
HMGB1P13-201ENST00000406019 BIVM-ERCC5R4GMW8 1640 aa2.71□□□□□ -1.97
HMGB1P13-201ENST00000406019 DIP2CQ9Y2E4 1556 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 BLMP54132 1417 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRAV8-1A0A0A6YYK1 113 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRAV13-1A0A0B4J241 112 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGHV1-58A0A0C4DH39 117 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 A0A0D9SEW6 157 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 C7orf77A4D0Y5 90 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 A8MWV9 139 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 H3BMM0 161 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 TMEM256-PLSCR3K7ERE1 68 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 COX7A2LO14548 114 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGKV1-5P01602 117 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 PYYP10082 97 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 SLC25A4P12235 298 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 GABARAPL2P60520 117 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 SNRPD3P62318 126 aaKnown RBP2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 BVES-AS1Q5T3Y7 98 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 XAF1Q6GPH4 301 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 Q6ZS92 163 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 FP248Q71RG6 208 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR10AC1Q8NH08 325 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 RNASE6Q93091 150 aaKnown RBP2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 UBE2WQ96B02 151 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 GNPNAT1Q96EK6 184 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 CCL13Q99616 98 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 COMMD5Q9GZQ3 224 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 LINC00588Q9Y4M8 146 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 CHD3Q12873 2000 aaKnown RBP2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 ABCA6Q8N139 1617 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 FER1L6Q2WGJ9 1857 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 PXDNLA1KZ92 1463 aa2.71□□□□□ -1.98
HMGB1P13-201ENST00000406019 SETBP1Q9Y6X0 1596 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms