RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 ARL6IP6Q8N6S5 226 aa16.48■□□□□ 0.23
EPCAM-202ENST00000405271 CMTM2Q8TAZ6 248 aa16.48■□□□□ 0.23
EPCAM-202ENST00000405271 NOTCH3Q9UM47 2321 aa16.48■□□□□ 0.23
EPCAM-202ENST00000405271 TFPI2P48307 235 aa16.47■□□□□ 0.23
EPCAM-202ENST00000405271 DEFA6Q01524 100 aa16.47■□□□□ 0.23
EPCAM-202ENST00000405271 WFDC3Q8IUB2 231 aa16.47■□□□□ 0.23
EPCAM-202ENST00000405271 IZUMO1RA6ND01 250 aa16.46■□□□□ 0.23
EPCAM-202ENST00000405271 WIPF1O43516 503 aa16.46■□□□□ 0.23
EPCAM-202ENST00000405271 SNRPD3P62318 126 aaKnown RBP16.46■□□□□ 0.23
EPCAM-202ENST00000405271 CSN1S1P47710 185 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 SRSF3P84103 164 aaKnown RBP16.45■□□□□ 0.22
EPCAM-202ENST00000405271 PSG3Q16557 428 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 RNF182Q8N6D2 247 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 HIST1H2BAQ96A08 127 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 C11orf52Q96A22 123 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 TMEM250H0YL14 139 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 HLA-DMBP28068 263 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 GUCA2BQ16661 112 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 IGFL4Q6B9Z1 124 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 TREM1Q9NP99 234 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 EPDR1Q9UM22 224 aa16.45■□□□□ 0.22
EPCAM-202ENST00000405271 M0R3E3 92 aa16.44■□□□□ 0.22
EPCAM-202ENST00000405271 SRP19P09132 144 aaKnown RBP16.44■□□□□ 0.22
EPCAM-202ENST00000405271 ATG101Q9BSB4 218 aa16.44■□□□□ 0.22
EPCAM-202ENST00000405271 ZNF256Q9Y2P7 627 aaPredicted RBP16.44■□□□□ 0.22
EPCAM-202ENST00000405271 SORL1Q92673 2214 aa16.43■□□□□ 0.22
EPCAM-202ENST00000405271 SERTM2A0A1B0GWG4 89 aa16.43■□□□□ 0.22
EPCAM-202ENST00000405271 SCO2A0A1W2PP80 73 aa16.43■□□□□ 0.22
EPCAM-202ENST00000405271 PEX7O00628 323 aa16.43■□□□□ 0.22
EPCAM-202ENST00000405271 TCRAP04437 139 aa16.43■□□□□ 0.22
EPCAM-202ENST00000405271 IGLL1P15814 213 aa16.43■□□□□ 0.22
EPCAM-202ENST00000405271 ZNF738Q8NE65 137 aa16.43■□□□□ 0.22
EPCAM-202ENST00000405271 C20orf173Q96LM9 149 aa16.43■□□□□ 0.22
EPCAM-202ENST00000405271 ZNF688P0C7X2 276 aa16.42■□□□□ 0.22
EPCAM-202ENST00000405271 GNG5P63218 68 aa16.42■□□□□ 0.22
EPCAM-202ENST00000405271 FAM24BQ8N5W8 94 aa16.42■□□□□ 0.22
EPCAM-202ENST00000405271 RPUSD4Q96CM3 377 aaKnown RBP16.42■□□□□ 0.22
EPCAM-202ENST00000405271 LINC00052Q96N35 136 aa16.42■□□□□ 0.22
EPCAM-202ENST00000405271 RPH3ALQ9UNE2 315 aa16.42■□□□□ 0.22
EPCAM-202ENST00000405271 DIRC3C9JPN6 131 aa16.41■□□□□ 0.22
EPCAM-202ENST00000405271 CYB561D1Q8N8Q1 229 aa16.41■□□□□ 0.22
EPCAM-202ENST00000405271 SLC35B3Q9H1N7 401 aa16.41■□□□□ 0.22
EPCAM-202ENST00000405271 C9JQL5 133 aa16.4■□□□□ 0.22
EPCAM-202ENST00000405271 K7EQM0 130 aa16.4■□□□□ 0.22
EPCAM-202ENST00000405271 AKR1C3P42330 323 aa16.4■□□□□ 0.22
EPCAM-202ENST00000405271 CMC4P56277 68 aaPredicted RBP16.4■□□□□ 0.22
EPCAM-202ENST00000405271 BEAN1Q3B7T3 259 aa16.4■□□□□ 0.22
EPCAM-202ENST00000405271 PSMG4Q5JS54 123 aa16.4■□□□□ 0.22
EPCAM-202ENST00000405271 G3V4G9 280 aa16.4■□□□□ 0.22
EPCAM-202ENST00000405271 SLC7A5P1Q8MH63 180 aa16.4■□□□□ 0.22
EPCAM-202ENST00000405271 C2CD4CQ8TF44 421 aa16.4■□□□□ 0.22
EPCAM-202ENST00000405271 MAP6D1Q9H9H5 199 aa16.4■□□□□ 0.22
EPCAM-202ENST00000405271 RBAKDNA6NC62 111 aa16.39■□□□□ 0.21
EPCAM-202ENST00000405271 ZNF705FA8MVS1 300 aaPredicted RBP16.39■□□□□ 0.21
EPCAM-202ENST00000405271 GOLT1AQ6ZVE7 132 aa16.39■□□□□ 0.21
EPCAM-202ENST00000405271 CITED4Q96RK1 184 aa16.39■□□□□ 0.21
EPCAM-202ENST00000405271 FAM110AQ9BQ89 295 aa16.39■□□□□ 0.21
EPCAM-202ENST00000405271 CNN1P51911 297 aaKnown RBP16.38■□□□□ 0.21
EPCAM-202ENST00000405271 AGRNO00468 2067 aa16.37■□□□□ 0.21
EPCAM-202ENST00000405271 FBLL1A6NHQ2 334 aaKnown RBP16.37■□□□□ 0.21
EPCAM-202ENST00000405271 SFTA3P0C7M3 94 aa16.37■□□□□ 0.21
EPCAM-202ENST00000405271 OXLD1Q5BKU9 147 aa16.37■□□□□ 0.21
EPCAM-202ENST00000405271 SAMD5Q5TGI4 173 aa16.37■□□□□ 0.21
EPCAM-202ENST00000405271 TMEM75Q8N9X5 138 aa16.37■□□□□ 0.21
EPCAM-202ENST00000405271 S100A9P06702 114 aaKnown RBP16.36■□□□□ 0.21
EPCAM-202ENST00000405271 CEBPGP53567 150 aa16.36■□□□□ 0.21
EPCAM-202ENST00000405271 DEFB131AP59861 70 aa16.36■□□□□ 0.21
EPCAM-202ENST00000405271 ODF3L2Q3SX64 289 aa16.36■□□□□ 0.21
EPCAM-202ENST00000405271 FMC1Q96HJ9 113 aa16.36■□□□□ 0.21
EPCAM-202ENST00000405271 PARLQ9H300 379 aa16.36■□□□□ 0.21
EPCAM-202ENST00000405271 IGKV2-40A0A087WW87 121 aaPredicted RBP16.35■□□□□ 0.21
EPCAM-202ENST00000405271 OR11H12B2RN74 326 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 PRAC2D3DTV9 90 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 IGKV2D-40P01614 121 aaPredicted RBP16.35■□□□□ 0.21
EPCAM-202ENST00000405271 UBE2G1P62253 170 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 TMEM183BQ1AE95 376 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 FOXI2Q6ZQN5 318 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 KLF12Q9Y4X4 402 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 TMEM218A2RU14 115 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 FAM74A3Q4VXF1 159 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 SOHLH1Q5JUK2 328 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 OR8A1Q8NGG7 326 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 OR10J6PQ8NGY7 276 aa16.35■□□□□ 0.21
EPCAM-202ENST00000405271 RPL35P42766 123 aaKnown RBP16.34■□□□□ 0.21
EPCAM-202ENST00000405271 TAS2R60P59551 318 aa16.34■□□□□ 0.21
EPCAM-202ENST00000405271 KPRPQ5T749 579 aaPredicted RBP16.34■□□□□ 0.21
EPCAM-202ENST00000405271 EBLN2Q6P2I7 272 aa16.34■□□□□ 0.21
EPCAM-202ENST00000405271 C9orf47Q6ZRZ4 202 aa16.34■□□□□ 0.21
EPCAM-202ENST00000405271 GTSCR1Q86UQ5 136 aa16.34■□□□□ 0.21
EPCAM-202ENST00000405271 DERL1Q9BUN8 251 aa16.34■□□□□ 0.21
EPCAM-202ENST00000405271 SAV1Q9H4B6 383 aaPredicted RBP16.34■□□□□ 0.21
EPCAM-202ENST00000405271 ZMAT5Q9UDW3 170 aaKnown RBP16.34■□□□□ 0.21
EPCAM-202ENST00000405271 TRBV6-1A0A0K0K1D8 114 aa16.33■□□□□ 0.2
EPCAM-202ENST00000405271 NPIPB6E9PJ23 425 aa16.33■□□□□ 0.2
EPCAM-202ENST00000405271 FLI1Q01543 452 aaPredicted RBP16.33■□□□□ 0.2
EPCAM-202ENST00000405271 SMIM7Q9BQ49 75 aa16.33■□□□□ 0.2
EPCAM-202ENST00000405271 A0A0J9YX75 114 aa16.32■□□□□ 0.2
EPCAM-202ENST00000405271 ZNF727A8MUV8 499 aa16.32■□□□□ 0.2
EPCAM-202ENST00000405271 C9JCJ5 164 aa16.32■□□□□ 0.2
EPCAM-202ENST00000405271 HIST1H1AQ02539 215 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms