RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 E7EUB6 86 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 L7N2F9 121 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 CORTO00230 105 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 SSSCA1O60232 199 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 CNIH1O95406 144 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 BRI3O95415 125 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 TMEM50AO95807 157 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 CRYGCP07315 174 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 NUP62P37198 522 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 SUB1P53999 127 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 S100A10P60903 97 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 RAB11AP62491 216 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 BAXQ07812 192 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 TMEM267Q0VDI3 215 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 FXYD3Q14802 87 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 TNXAQ16473 311 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 LY6EQ16553 131 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 AKIRIN2Q53H80 203 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 Q5BKY6 102 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 TMEM14EPQ6UXP3 125 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 Q8N2B8 174 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 KCNRGQ8N5I3 272 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 SIGLECL1Q8N7X8 197 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 INO80EQ8NBZ0 244 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR1L6Q8NGR2 347 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 SGMS2Q8NHU3 365 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 RNF185Q96GF1 192 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 SMR3AQ99954 134 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 GGACTQ9BVM4 153 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 ENY2Q9NPA8 101 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 PSENENQ9NZ42 101 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR5AC2Q9NZP5 309 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 TNFSF18Q9UNG2 199 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 LSM5Q9Y4Y9 91 aaKnown RBP3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 NF1P21359 2839 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 WNK1Q9H4A3 2382 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 TEP1Q99973 2627 aaKnown RBP3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 FXYD6-FXYD2A0A087WZ82 144 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 A0A1B0GW64 132 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 FAM24AA6NFZ4 105 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 FNDC10F2Z333 226 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 SMLR1H3BR10 107 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 H3BUA1 57 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 TAAR5O14804 337 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 ARPC5O15511 151 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 CYB5BO43169 146 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR13C7P0DN81 318 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 RNASE2P10153 161 aaKnown RBP3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 IAPPP10997 89 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 HIST1H1BP16401 226 aaKnown RBP3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 CTRB1P17538 263 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 NPY1RP25929 384 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 RPL12P30050 165 aaKnown RBP3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 S100A11P31949 105 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 SNCAP37840 140 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 SULT1A1P50225 295 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 HBG1P69891 147 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 HBG2P69892 147 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 WT1-ASQ06250 92 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 KIAA0087Q14695 138 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 ATP6V1FQ16864 119 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 LGALSLQ3ZCW2 172 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 SPANXN5Q5MJ07 72 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 C10orf55Q5SWW7 151 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 LAMTOR1Q6IAA8 161 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 SLC35E3Q7Z769 313 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 STX12Q86Y82 276 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 C9orf62Q8N4C0 152 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 TTC9CQ8N5M4 171 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR10W1Q8NGF6 305 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR1P1Q8NH06 330 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 RNASEH2CQ8TDP1 164 aaKnown RBP3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 CACNG8Q8WXS5 425 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 FAM104AQ969W3 186 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 RBMXL1Q96E39 390 aaKnown RBP3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 P2RX4Q99571 388 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 HSPB9Q9BQS6 159 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 HINT2Q9BX68 163 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 MFFQ9GZY8 342 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 HSPB11Q9Y547 144 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 F11RQ9Y624 299 aaKnown RBP3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 JMJD1CQ15652 2540 aa3.17□□□□□ -1.9
HMGB3P19-201ENST00000403971 SETD2Q9BYW2 2564 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 CUBNO60494 3623 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 IGLV11-55A0A075B6I3 123 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 TRBV9A0A0B4J1U6 114 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 TRAV41A0A0B4J266 112 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 IGSF23A1L1A6 192 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 PCP4L1A6NKN8 68 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 H3BP45 60 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 BOLA2-SMG1P6H3BVE0 249 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 TCF21O43680 179 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 SOX15O60248 233 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 IFNA10P01566 189 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 IFNA4P05014 189 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 METTL15P1P0C7V9 234 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 CXCL2P19875 107 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 GPX4P36969 197 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 TAGLN2P37802 199 aaKnown RBP3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 EIF2B2P49770 351 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms