RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 LINC00052Q96N35 136 aa13.03□□□□□ -0.32
SMIM11A-202ENST00000399295 TCEAL7Q9BRU2 100 aa13.03□□□□□ -0.32
SMIM11A-202ENST00000399295 SRD5A3Q9H8P0 318 aa13.03□□□□□ -0.32
SMIM11A-202ENST00000399295 U3KQE9 123 aa13.03□□□□□ -0.32
SMIM11A-202ENST00000399295 BUB3O43684 328 aa13.02□□□□□ -0.33
SMIM11A-202ENST00000399295 SOHLH1Q5JUK2 328 aa13.02□□□□□ -0.33
SMIM11A-202ENST00000399295 C10orf91Q5T1B1 145 aa13.02□□□□□ -0.33
SMIM11A-202ENST00000399295 OR8I2Q8N0Y5 310 aa13.02□□□□□ -0.33
SMIM11A-202ENST00000399295 GBGT1Q8N5D6 347 aa13.02□□□□□ -0.33
SMIM11A-202ENST00000399295 CARHSP1Q9Y2V2 147 aaKnown RBP13.02□□□□□ -0.33
SMIM11A-202ENST00000399295 YTHDF2Q9Y5A9 579 aaKnown RBP13.02□□□□□ -0.33
SMIM11A-202ENST00000399295 IGLC2P0DOY2 106 aa13.01□□□□□ -0.33
SMIM11A-202ENST00000399295 U3KQK5 164 aa13.01□□□□□ -0.33
SMIM11A-202ENST00000399295 HUWE1Q7Z6Z7 4374 aaKnown RBP13□□□□□ -0.33
SMIM11A-202ENST00000399295 RBMY1BA6NDE4 496 aaKnown RBP13□□□□□ -0.33
SMIM11A-202ENST00000399295 RBMY1EA6NEQ0 496 aaKnown RBP13□□□□□ -0.33
SMIM11A-202ENST00000399295 DNASE2O00115 360 aaPredicted RBP13□□□□□ -0.33
SMIM11A-202ENST00000399295 MRPS12O15235 138 aaKnown RBP13□□□□□ -0.33
SMIM11A-202ENST00000399295 RBMY1DP0C7P1 496 aaKnown RBP13□□□□□ -0.33
SMIM11A-202ENST00000399295 MEOX2P50222 304 aa13□□□□□ -0.33
SMIM11A-202ENST00000399295 PDE6HQ13956 83 aa13□□□□□ -0.33
SMIM11A-202ENST00000399295 ODF3L2Q3SX64 289 aa13□□□□□ -0.33
SMIM11A-202ENST00000399295 FAM74A3Q4VXF1 159 aa13□□□□□ -0.33
SMIM11A-202ENST00000399295 LINC00322Q6ZN03 302 aaPredicted RBP13□□□□□ -0.33
SMIM11A-202ENST00000399295 WFDC3Q8IUB2 231 aa13□□□□□ -0.33
SMIM11A-202ENST00000399295 LYPD1Q8N2G4 141 aa13□□□□□ -0.33
SMIM11A-202ENST00000399295 CYB561D1Q8N8Q1 229 aa13□□□□□ -0.33
SMIM11A-202ENST00000399295 MS4A6AQ9H2W1 248 aa13□□□□□ -0.33
SMIM11A-202ENST00000399295 ZMAT4Q9H898 229 aa13□□□□□ -0.33
SMIM11A-202ENST00000399295 HELTA6NFD8 242 aa12.99□□□□□ -0.33
SMIM11A-202ENST00000399295 GALR1P47211 349 aa12.99□□□□□ -0.33
SMIM11A-202ENST00000399295 ATP5G3P48201 142 aa12.99□□□□□ -0.33
SMIM11A-202ENST00000399295 CMC4P56277 68 aaPredicted RBP12.99□□□□□ -0.33
SMIM11A-202ENST00000399295 C16orf54Q6UWD8 224 aa12.99□□□□□ -0.33
SMIM11A-202ENST00000399295 CCDC28AQ8IWP9 274 aa12.99□□□□□ -0.33
SMIM11A-202ENST00000399295 WWC2-AS2Q96NR7 200 aa12.99□□□□□ -0.33
SMIM11A-202ENST00000399295 FAM110AQ9BQ89 295 aa12.99□□□□□ -0.33
SMIM11A-202ENST00000399295 TRBV19A0A075B6N1 114 aa12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 A0A087X0K7 114 aa12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 TRAV2A0A0B4J234 112 aa12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 ZNF253O75346 499 aa12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 ADCYAP1P18509 176 aa12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 ATF4P18848 351 aaPredicted RBP12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 SUMO1P63165 101 aaKnown RBP12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 GLMPQ8WWB7 406 aa12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 C11orf52Q96A22 123 aa12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 RPUSD4Q96CM3 377 aaKnown RBP12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 TM2D3Q9BRN9 247 aa12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 ZNF586Q9NXT0 402 aa12.98□□□□□ -0.33
SMIM11A-202ENST00000399295 GGTLC3B5MD39 225 aa12.97□□□□□ -0.33
SMIM11A-202ENST00000399295 H3BQ15 152 aa12.97□□□□□ -0.33
SMIM11A-202ENST00000399295 APOC3P02656 99 aa12.97□□□□□ -0.33
SMIM11A-202ENST00000399295 CEBPGP53567 150 aa12.97□□□□□ -0.33
SMIM11A-202ENST00000399295 RANP62826 216 aaKnown RBP12.97□□□□□ -0.33
SMIM11A-202ENST00000399295 PSG9Q00887 426 aa12.97□□□□□ -0.33
SMIM11A-202ENST00000399295 SVBPQ8N300 66 aa12.97□□□□□ -0.33
SMIM11A-202ENST00000399295 OTORQ9NRC9 128 aa12.97□□□□□ -0.33
SMIM11A-202ENST00000399295 LOC102724200A0A096LPH7 203 aaPredicted RBP12.96□□□□□ -0.33
SMIM11A-202ENST00000399295 APRG1Q8IVJ8 170 aa12.96□□□□□ -0.33
SMIM11A-202ENST00000399295 HIST1H2BAQ96A08 127 aa12.96□□□□□ -0.33
SMIM11A-202ENST00000399295 RCHY1Q96PM5 261 aa12.96□□□□□ -0.33
SMIM11A-202ENST00000399295 SPATA25Q9BR10 227 aa12.96□□□□□ -0.33
SMIM11A-202ENST00000399295 Q9H3A6 140 aa12.96□□□□□ -0.33
SMIM11A-202ENST00000399295 SIGLEC15Q6ZMC9 328 aa12.95□□□□□ -0.34
SMIM11A-202ENST00000399295 ARL6IP6Q8N6S5 226 aa12.95□□□□□ -0.34
SMIM11A-202ENST00000399295 C5orf17Q8NAS9 161 aa12.95□□□□□ -0.34
SMIM11A-202ENST00000399295 NIPSNAP3BQ9BS92 247 aa12.95□□□□□ -0.34
SMIM11A-202ENST00000399295 AAMDCQ9H7C9 122 aa12.95□□□□□ -0.34
SMIM11A-202ENST00000399295 MAP6D1Q9H9H5 199 aa12.95□□□□□ -0.34
SMIM11A-202ENST00000399295 PGPA6NDG6 321 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 ZNF727A8MUV8 499 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 K7EQG2 157 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 NDUFB4O95168 129 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 SNAPINO95295 136 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 FAM24BQ8N5W8 94 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 DCANP1Q8TF63 244 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 SMIM7Q9BQ49 75 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 SLC50A1Q9BRV3 221 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 PARLQ9H300 379 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 CLEC5AQ9NY25 188 aa12.94□□□□□ -0.34
SMIM11A-202ENST00000399295 SCO2A0A1W2PP80 73 aa12.93□□□□□ -0.34
SMIM11A-202ENST00000399295 SLC25A5P05141 298 aaKnown RBP12.93□□□□□ -0.34
SMIM11A-202ENST00000399295 DEFB131AP59861 70 aa12.93□□□□□ -0.34
SMIM11A-202ENST00000399295 PNRC1Q12796 327 aaPredicted RBP12.93□□□□□ -0.34
SMIM11A-202ENST00000399295 ZNF124Q15973 351 aa12.93□□□□□ -0.34
SMIM11A-202ENST00000399295 CMTM2Q8TAZ6 248 aa12.93□□□□□ -0.34
SMIM11A-202ENST00000399295 TVP23CQ96ET8 276 aa12.93□□□□□ -0.34
SMIM11A-202ENST00000399295 EPDR1Q9UM22 224 aa12.93□□□□□ -0.34
SMIM11A-202ENST00000399295 PEX7O00628 323 aa12.92□□□□□ -0.34
SMIM11A-202ENST00000399295 S100A9P06702 114 aaKnown RBP12.92□□□□□ -0.34
SMIM11A-202ENST00000399295 SAMD13Q5VXD3 122 aa12.92□□□□□ -0.34
SMIM11A-202ENST00000399295 NRN1Q9NPD7 142 aa12.92□□□□□ -0.34
SMIM11A-202ENST00000399295 NAT8Q9UHE5 227 aa12.92□□□□□ -0.34
SMIM11A-202ENST00000399295 PRELID1Q9Y255 219 aa12.92□□□□□ -0.34
SMIM11A-202ENST00000399295 NBEAL2Q6ZNJ1 2754 aa12.91□□□□□ -0.34
SMIM11A-202ENST00000399295 H3BTX0 84 aa12.91□□□□□ -0.34
SMIM11A-202ENST00000399295 SNRPCP09234 159 aaKnown RBP12.91□□□□□ -0.34
SMIM11A-202ENST00000399295 ZNF688P0C7X2 276 aa12.91□□□□□ -0.34
SMIM11A-202ENST00000399295 RPL35AP18077 110 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms