RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CLEC7AQ9BXN2 247 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 LSM4Q9Y4Z0 139 aaKnown RBP3.97□□□□□ -1.77
SMAD4-202ENST00000398417 LY96Q9Y6Y9 160 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV3OR16-13A0A075B7E8 117 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV3-74A0A0B4J1X5 117 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 TRAV8-4A0A0B4J246 113 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 A8MWP6 167 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 GNG7O60262 68 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 PIP4P1Q86T03 277 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 ARPC1AQ92747 370 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM133Q9H2Q1 129 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 OR2T8A6NH00 312 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 SNAI2O43623 268 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 CGB3P0DN86 165 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 CGB7P0DN87 165 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 APOBEC3AP31941 199 aaPredicted RBP3.97□□□□□ -1.77
SMAD4-202ENST00000398417 WT1-ASQ06250 92 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 C1orf159Q96HA4 380 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 RABAC1Q9UI14 185 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM189A5PLL7 270 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 TIMM23O14925 209 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM30BQ3MIR4 351 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 FAM162BQ5T6X4 162 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 C11orf52Q96A22 123 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 ITGB1BP1O14713 200 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV1-3A0A0C4DH29 117 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 E7EUB6 86 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 TCRAP04437 139 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 COA6Q5JTJ3 125 aaKnown RBP3.97□□□□□ -1.77
SMAD4-202ENST00000398417 CACNG8Q8WXS5 425 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 LINC00477Q96M19 166 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 RCHY1Q96PM5 261 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM191AQ9H0A3 160 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 NDUFA4L2Q9NRX3 87 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 RNF114Q9Y508 228 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 CHD9Q3L8U1 2897 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV2-26A0A0B4J1V2 119 aa3.96□□□□□ -1.77
SMAD4-202ENST00000398417 A0A1W2PS18 150 aa3.96□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM262E9PQX1 116 aa3.96□□□□□ -1.77
SMAD4-202ENST00000398417 FXYD7P58549 80 aa3.96□□□□□ -1.77
SMAD4-202ENST00000398417 PRSS33Q8NF86 280 aa3.96□□□□□ -1.77
SMAD4-202ENST00000398417 UQCR10Q9UDW1 63 aa3.96□□□□□ -1.77
SMAD4-202ENST00000398417 TRBV9A0A0B4J1U6 114 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 EVI2AP22794 236 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 ZNF138P52744 262 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 C5orf17Q8NAS9 161 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 MAP1LC3CQ9BXW4 147 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 ESM1Q9NQ30 184 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 TMEM14BQ9NUH8 114 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 TRAV21A0A0B4J279 112 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 CFHR2P36980 270 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 RBMY1FQ15415 496 aaKnown RBP3.96□□□□□ -1.78
SMAD4-202ENST00000398417 TEX36Q5VZQ5 186 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 RNASEH2CQ8TDP1 164 aaKnown RBP3.96□□□□□ -1.78
SMAD4-202ENST00000398417 TP53TG3Q9ULZ0 132 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 GPX1P07203 203 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 EBLN2Q6P2I7 272 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 TMUB1Q9BVT8 246 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 IGKV1OR2-108A0A075B7D4 117 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 A0A1W2PPI3 338 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 IGLV2-23P01705 113 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 CKS2P33552 79 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 GPR82Q96P67 336 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 OTORQ9NRC9 128 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 LAMTOR3Q9UHA4 124 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 IGLV2-8P01709 118 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 COX6CP09669 75 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 PSG1P11464 419 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 OR10J3Q5JRS4 329 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 SIGLEC15Q6ZMC9 328 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 GNB1LQ9BYB4 327 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 PSG8Q9UQ74 426 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 GPR179Q6PRD1 2367 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 APOMO95445 188 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 PPP1R17O96001 155 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 Q0VG73 95 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 C17orf77Q96MU5 243 aa3.96□□□□□ -1.78
SMAD4-202ENST00000398417 HLA-DRB1P01911 266 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 ZNF688P0C7X2 276 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 NMUP48645 174 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 CX3CL1P78423 397 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 RIGQ13278 110 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 ZNF672Q499Z4 452 aaPredicted RBP3.95□□□□□ -1.78
SMAD4-202ENST00000398417 TMEM155Q4W5P6 130 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 EXOC3-AS1Q8N2X6 119 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 NUP35Q8NFH5 326 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 TSKUQ8WUA8 353 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 FNDC1Q4ZHG4 1894 aaPredicted RBP3.95□□□□□ -1.78
SMAD4-202ENST00000398417 CDK2AP2O75956 126 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 GATA4P43694 442 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 ANKRD39Q53RE8 183 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 Q6ZVH6 145 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 IGF2BP2-AS1Q96M15 143 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 LINC00527Q9UJ94 153 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 MRPS16Q9Y3D3 137 aaKnown RBP3.95□□□□□ -1.78
SMAD4-202ENST00000398417 B9A039 149 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 FNDC10F2Z333 226 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 LHBP01229 141 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 STPG4Q8N801 248 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 APOHP02749 345 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms