RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 AMN1Q8IY45 258 aa18.95■□□□□ 0.62
CSNK1E-203ENST00000396832 GCSHP23434 173 aa18.94■□□□□ 0.62
CSNK1E-203ENST00000396832 FCGR2BP31994 310 aaPredicted RBP18.94■□□□□ 0.62
CSNK1E-203ENST00000396832 TMEM213A2RRL7 107 aa18.94■□□□□ 0.62
CSNK1E-203ENST00000396832 SLC25A39Q9BZJ4 359 aaPredicted RBP18.94■□□□□ 0.62
CSNK1E-203ENST00000396832 DKK2Q9UBU2 259 aa18.94■□□□□ 0.62
CSNK1E-203ENST00000396832 SMAGPQ0VAQ4 97 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 WFDC3Q8IUB2 231 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 SIGMAR1Q99720 223 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 M0R3E3 92 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 IGHV1-8P0DP01 117 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 PLGLAQ15195 96 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 ORMDL3Q8N138 153 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 PSG8Q9UQ74 426 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 U3KQK5 164 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 TRBV6-1A0A0K0K1D8 114 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 FXYD2P54710 66 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 PSG3Q16557 428 aa18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 BCL6BQ8N143 479 aaPredicted RBP18.93■□□□□ 0.62
CSNK1E-203ENST00000396832 SPTA1P02549 2419 aa18.92■□□□□ 0.62
CSNK1E-203ENST00000396832 FAM104BQ5XKR9 115 aa18.92■□□□□ 0.62
CSNK1E-203ENST00000396832 Q6AWC8 147 aa18.92■□□□□ 0.62
CSNK1E-203ENST00000396832 TMEM14CQ9P0S9 112 aa18.92■□□□□ 0.62
CSNK1E-203ENST00000396832 TMEM189A5PLL7 270 aa18.92■□□□□ 0.62
CSNK1E-203ENST00000396832 FBLL1A6NHQ2 334 aaKnown RBP18.92■□□□□ 0.62
CSNK1E-203ENST00000396832 LYZL1Q6UWQ5 148 aa18.92■□□□□ 0.62
CSNK1E-203ENST00000396832 NDUFS7O75251 213 aa18.91■□□□□ 0.62
CSNK1E-203ENST00000396832 TMEM75Q8N9X5 138 aa18.91■□□□□ 0.62
CSNK1E-203ENST00000396832 PAX8Q06710 450 aa18.91■□□□□ 0.62
CSNK1E-203ENST00000396832 KLF17Q5JT82 389 aaPredicted RBP18.9■□□□□ 0.62
CSNK1E-203ENST00000396832 PVRIGQ6DKI7 326 aa18.9■□□□□ 0.62
CSNK1E-203ENST00000396832 RASL11BQ9BPW5 248 aa18.9■□□□□ 0.62
CSNK1E-203ENST00000396832 DYNLRB1Q9NP97 96 aa18.9■□□□□ 0.62
CSNK1E-203ENST00000396832 K7ERJ3 54 aa18.9■□□□□ 0.62
CSNK1E-203ENST00000396832 TMEM133Q9H2Q1 129 aa18.9■□□□□ 0.62
CSNK1E-203ENST00000396832 SIGLEC9Q9Y336 463 aa18.9■□□□□ 0.62
CSNK1E-203ENST00000396832 SCGB1A1P11684 91 aa18.89■□□□□ 0.62
CSNK1E-203ENST00000396832 C8orf49Q96NF6 230 aa18.89■□□□□ 0.62
CSNK1E-203ENST00000396832 VGLL1Q99990 258 aa18.89■□□□□ 0.62
CSNK1E-203ENST00000396832 MRPL51Q4U2R6 128 aaKnown RBP18.89■□□□□ 0.61
CSNK1E-203ENST00000396832 C18orf15Q96N68 181 aa18.89■□□□□ 0.61
CSNK1E-203ENST00000396832 TTTY13Q9BZ97 58 aa18.89■□□□□ 0.61
CSNK1E-203ENST00000396832 A0A0G2JNJ9 132 aa18.88■□□□□ 0.61
CSNK1E-203ENST00000396832 Q9UFV3 132 aa18.88■□□□□ 0.61
CSNK1E-203ENST00000396832 SMKR1H3BMG3 65 aa18.88■□□□□ 0.61
CSNK1E-203ENST00000396832 K7EQM0 130 aa18.88■□□□□ 0.61
CSNK1E-203ENST00000396832 TRBV19A0A075B6N1 114 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 IGKV2D-26A0A0A0MRZ7 120 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 C16orf97H3BN30 126 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 PPP1R27Q86WC6 154 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 TSSC4Q9Y5U2 329 aaPredicted RBP18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 MC5RP33032 325 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 DLX6P56179 175 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 TMEM155Q4W5P6 130 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 NUP37Q8NFH4 326 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 TEX22C9J3V5 150 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 THBDP07204 575 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 CT45A10P0DMU9 189 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 S100A7AQ86SG5 101 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 NGBQ9NPG2 151 aa18.87■□□□□ 0.61
CSNK1E-203ENST00000396832 TLN1Q9Y490 2541 aaKnown RBP18.86■□□□□ 0.61
CSNK1E-203ENST00000396832 CNIH1O95406 144 aa18.86■□□□□ 0.61
CSNK1E-203ENST00000396832 CD300EQ496F6 205 aaPredicted RBP18.86■□□□□ 0.61
CSNK1E-203ENST00000396832 GAGE12HA6NDE8 117 aa18.86■□□□□ 0.61
CSNK1E-203ENST00000396832 NDUFS8O00217 210 aa18.86■□□□□ 0.61
CSNK1E-203ENST00000396832 ZNF207O43670 478 aaKnown RBP18.86■□□□□ 0.61
CSNK1E-203ENST00000396832 NPYP01303 97 aa18.86■□□□□ 0.61
CSNK1E-203ENST00000396832 CKS2P33552 79 aa18.86■□□□□ 0.61
CSNK1E-203ENST00000396832 ZFHX3Q15911 3703 aa18.85■□□□□ 0.61
CSNK1E-203ENST00000396832 WI2-2373I1.2A0A1W2PRP0 233 aa18.85■□□□□ 0.61
CSNK1E-203ENST00000396832 IGHV1-3A0A0C4DH29 117 aa18.85■□□□□ 0.61
CSNK1E-203ENST00000396832 IGKV1-17P01599 117 aa18.85■□□□□ 0.61
CSNK1E-203ENST00000396832 SIGLEC15Q6ZMC9 328 aa18.85■□□□□ 0.61
CSNK1E-203ENST00000396832 CHAC1Q9BUX1 264 aa18.85■□□□□ 0.61
CSNK1E-203ENST00000396832 IGHV3OR16-8A0A075B7F1 116 aa18.84■□□□□ 0.61
CSNK1E-203ENST00000396832 PHLDA1Q8WV24 401 aaPredicted RBP18.84■□□□□ 0.61
CSNK1E-203ENST00000396832 HIGD1BQ9P298 99 aa18.84■□□□□ 0.61
CSNK1E-203ENST00000396832 IL4P05112 153 aa18.84■□□□□ 0.61
CSNK1E-203ENST00000396832 WFDC2Q14508 124 aa18.84■□□□□ 0.61
CSNK1E-203ENST00000396832 NHP2Q9NX24 153 aaKnown RBP18.84■□□□□ 0.61
CSNK1E-203ENST00000396832 SMPXQ9UHP9 88 aa18.84■□□□□ 0.61
CSNK1E-203ENST00000396832 LINC00311Q8N616 119 aa18.83■□□□□ 0.61
CSNK1E-203ENST00000396832 SCNM1Q9BWG6 230 aa18.83■□□□□ 0.61
CSNK1E-203ENST00000396832 IGHV3-23P01764 117 aa18.82■□□□□ 0.6
CSNK1E-203ENST00000396832 C3orf36Q3SXR2 165 aa18.82■□□□□ 0.6
CSNK1E-203ENST00000396832 RNASE6Q93091 150 aaKnown RBP18.82■□□□□ 0.6
CSNK1E-203ENST00000396832 HHLA3Q9XRX5 114 aa18.82■□□□□ 0.6
CSNK1E-203ENST00000396832 K7EMI3 77 aa18.82■□□□□ 0.6
CSNK1E-203ENST00000396832 IGFL4Q6B9Z1 124 aa18.82■□□□□ 0.6
CSNK1E-203ENST00000396832 PIFOQ8TCI5 191 aa18.82■□□□□ 0.6
CSNK1E-203ENST00000396832 CLUHP3Q96NS8 147 aa18.82■□□□□ 0.6
CSNK1E-203ENST00000396832 SPANXB1Q9NS25 103 aaPredicted RBP18.82■□□□□ 0.6
CSNK1E-203ENST00000396832 A0A1B0GV72 72 aa18.81■□□□□ 0.6
CSNK1E-203ENST00000396832 BMI1P35226 326 aa18.81■□□□□ 0.6
CSNK1E-203ENST00000396832 Q6ZS92 163 aa18.81■□□□□ 0.6
CSNK1E-203ENST00000396832 FAM57AQ8TBR7 257 aa18.81■□□□□ 0.6
CSNK1E-203ENST00000396832 RPEQ96AT9 228 aa18.81■□□□□ 0.6
CSNK1E-203ENST00000396832 CEACAM4O75871 244 aa18.81■□□□□ 0.6
CSNK1E-203ENST00000396832 ATP6V0BQ99437 205 aa18.81■□□□□ 0.6
CSNK1E-203ENST00000396832 I3L2K1 104 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms