RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 SERF1AO75920 110 aa13.97□□□□□ -0.17
SREBF1-204ENST00000395756 SMIM12Q96EX1 92 aa13.97□□□□□ -0.17
SREBF1-204ENST00000395756 TMEM136Q6ZRR5 245 aa13.97□□□□□ -0.17
SREBF1-204ENST00000395756 OTORQ9NRC9 128 aa13.97□□□□□ -0.17
SREBF1-204ENST00000395756 TP53TG3Q9ULZ0 132 aa13.97□□□□□ -0.17
SREBF1-204ENST00000395756 NAV2Q8IVL1 2488 aa13.97□□□□□ -0.17
SREBF1-204ENST00000395756 OR2D3Q8NGH3 330 aa13.96□□□□□ -0.17
SREBF1-204ENST00000395756 C10orf105Q8TEF2 133 aa13.96□□□□□ -0.17
SREBF1-204ENST00000395756 A6NJY4 79 aa13.96□□□□□ -0.17
SREBF1-204ENST00000395756 VWC2LB2RUY7 222 aa13.96□□□□□ -0.17
SREBF1-204ENST00000395756 SAP30O75446 220 aa13.96□□□□□ -0.17
SREBF1-204ENST00000395756 P01737 135 aa13.96□□□□□ -0.17
SREBF1-204ENST00000395756 SPATA45Q537H7 98 aa13.96□□□□□ -0.17
SREBF1-204ENST00000395756 PGLYRP4Q96LB8 373 aa13.96□□□□□ -0.17
SREBF1-204ENST00000395756 TRAV30A0A087WSZ9 112 aa13.96□□□□□ -0.18
SREBF1-204ENST00000395756 WI2-2373I1.2A0A1W2PRP0 233 aa13.96□□□□□ -0.18
SREBF1-204ENST00000395756 SRIP30626 198 aa13.96□□□□□ -0.18
SREBF1-204ENST00000395756 TPPP3Q9BW30 176 aa13.96□□□□□ -0.18
SREBF1-204ENST00000395756 ANKRD17O75179 2603 aaKnown RBP13.95□□□□□ -0.18
SREBF1-204ENST00000395756 K7ERU9 68 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 IGLC2P0DOY2 106 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 COL8A1P27658 744 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 HLA-DMBP28068 263 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 SLAQ13239 276 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 GRAMD2BQ96HH9 432 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 FMC1Q96HJ9 113 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 ZNF414Q96IQ9 312 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 KLF12Q9Y4X4 402 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 IZUMO1RA6ND01 250 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 KRTDAPP60985 99 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 GNB1LQ9BYB4 327 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 TMEM14CQ9P0S9 112 aa13.95□□□□□ -0.18
SREBF1-204ENST00000395756 PAX8Q06710 450 aa13.94□□□□□ -0.18
SREBF1-204ENST00000395756 SIGLEC15Q6ZMC9 328 aa13.94□□□□□ -0.18
SREBF1-204ENST00000395756 DOPEY2Q9Y3R5 2298 aa13.94□□□□□ -0.18
SREBF1-204ENST00000395756 IGHV1-69DA0A0B4J2H0 117 aa13.94□□□□□ -0.18
SREBF1-204ENST00000395756 LTAP01374 205 aa13.94□□□□□ -0.18
SREBF1-204ENST00000395756 IGHV1-69P01742 117 aa13.94□□□□□ -0.18
SREBF1-204ENST00000395756 GDF5OSQ5U4N7 250 aa13.94□□□□□ -0.18
SREBF1-204ENST00000395756 MLST8Q9BVC4 326 aa13.94□□□□□ -0.18
SREBF1-204ENST00000395756 SAMD10Q9BYL1 202 aa13.94□□□□□ -0.18
SREBF1-204ENST00000395756 TLN2Q9Y4G6 2542 aa13.94□□□□□ -0.18
SREBF1-204ENST00000395756 ZNF253O75346 499 aa13.93□□□□□ -0.18
SREBF1-204ENST00000395756 APCSP02743 223 aa13.93□□□□□ -0.18
SREBF1-204ENST00000395756 TRAV9-1A0A075B6T8 112 aa13.93□□□□□ -0.18
SREBF1-204ENST00000395756 TMSB15BA0A087X1C1 80 aa13.93□□□□□ -0.18
SREBF1-204ENST00000395756 TMEM8BA6NDV4 472 aa13.93□□□□□ -0.18
SREBF1-204ENST00000395756 Q86TA4 180 aa13.93□□□□□ -0.18
SREBF1-204ENST00000395756 IGLV2-11P01706 119 aa13.93□□□□□ -0.18
SREBF1-204ENST00000395756 TSKUQ8WUA8 353 aa13.93□□□□□ -0.18
SREBF1-204ENST00000395756 RCHY1Q96PM5 261 aa13.93□□□□□ -0.18
SREBF1-204ENST00000395756 HIF1ANQ9NWT6 349 aa13.93□□□□□ -0.18
SREBF1-204ENST00000395756 BMPR1BO00238 502 aa13.92□□□□□ -0.18
SREBF1-204ENST00000395756 LINC00310P59036 64 aa13.92□□□□□ -0.18
SREBF1-204ENST00000395756 LCNL1Q6ZST4 164 aa13.92□□□□□ -0.18
SREBF1-204ENST00000395756 C5orf56Q8N8D9 126 aa13.92□□□□□ -0.18
SREBF1-204ENST00000395756 GTSF1Q8WW33 167 aa13.92□□□□□ -0.18
SREBF1-204ENST00000395756 MBD6Q96DN6 1003 aa13.92□□□□□ -0.18
SREBF1-204ENST00000395756 RPP21Q9H633 154 aaKnown RBP13.92□□□□□ -0.18
SREBF1-204ENST00000395756 UQCR10Q9UDW1 63 aa13.92□□□□□ -0.18
SREBF1-204ENST00000395756 RABAC1Q9UI14 185 aa13.92□□□□□ -0.18
SREBF1-204ENST00000395756 IGKV2-40A0A087WW87 121 aaPredicted RBP13.92□□□□□ -0.18
SREBF1-204ENST00000395756 IGKV2D-40P01614 121 aaPredicted RBP13.92□□□□□ -0.18
SREBF1-204ENST00000395756 ZC2HC1AQ96GY0 325 aa13.92□□□□□ -0.18
SREBF1-204ENST00000395756 AAMDCQ9H7C9 122 aa13.92□□□□□ -0.18
SREBF1-204ENST00000395756 H3BUX3 64 aa13.91□□□□□ -0.18
SREBF1-204ENST00000395756 AVPP01185 164 aa13.91□□□□□ -0.18
SREBF1-204ENST00000395756 FAM231DQ6ZW35 169 aa13.91□□□□□ -0.18
SREBF1-204ENST00000395756 C8orf49Q96NF6 230 aa13.91□□□□□ -0.18
SREBF1-204ENST00000395756 MUC21A0A0G2JKD1 596 aa13.91□□□□□ -0.18
SREBF1-204ENST00000395756 MUC21A0A140T8X8 626 aa13.91□□□□□ -0.18
SREBF1-204ENST00000395756 PMCHP20382 165 aa13.91□□□□□ -0.18
SREBF1-204ENST00000395756 MUC21Q5SSG8 566 aa13.91□□□□□ -0.18
SREBF1-204ENST00000395756 FAM110DQ8TAY7 271 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-204ENST00000395756 PSG8Q9UQ74 426 aa13.91□□□□□ -0.18
SREBF1-204ENST00000395756 MRPS12O15235 138 aaKnown RBP13.9□□□□□ -0.18
SREBF1-204ENST00000395756 PIFOQ8TCI5 191 aa13.9□□□□□ -0.18
SREBF1-204ENST00000395756 BLCAPP62952 87 aa13.9□□□□□ -0.18
SREBF1-204ENST00000395756 ATOH7Q8N100 152 aa13.9□□□□□ -0.18
SREBF1-204ENST00000395756 FAM19A2Q8N3H0 131 aa13.9□□□□□ -0.18
SREBF1-204ENST00000395756 Q8TAT8 98 aa13.9□□□□□ -0.18
SREBF1-204ENST00000395756 ZNF785A8K8V0 405 aa13.9□□□□□ -0.18
SREBF1-204ENST00000395756 APOHP02749 345 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-204ENST00000395756 FOXA3P55318 350 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-204ENST00000395756 Q6ZS46 218 aa13.9□□□□□ -0.18
SREBF1-204ENST00000395756 IGHV3-11P01762 117 aa13.89□□□□□ -0.19
SREBF1-204ENST00000395756 TPPP2P59282 170 aa13.89□□□□□ -0.19
SREBF1-204ENST00000395756 ZNF502Q8TBZ5 544 aa13.89□□□□□ -0.19
SREBF1-204ENST00000395756 DIRC3C9JPN6 131 aa13.89□□□□□ -0.19
SREBF1-204ENST00000395756 MSMBP08118 114 aa13.89□□□□□ -0.19
SREBF1-204ENST00000395756 NTF3P20783 257 aa13.89□□□□□ -0.19
SREBF1-204ENST00000395756 TMEM95Q3KNT9 176 aa13.89□□□□□ -0.19
SREBF1-204ENST00000395756 CCDC140Q96MF4 163 aa13.89□□□□□ -0.19
SREBF1-204ENST00000395756 CCDC168Q8NDH2 2452 aa13.89□□□□□ -0.19
SREBF1-204ENST00000395756 K7EQM0 130 aa13.88□□□□□ -0.19
SREBF1-204ENST00000395756 HLA-DQA1P01909 254 aa13.88□□□□□ -0.19
SREBF1-204ENST00000395756 IGLC3P0DOY3 106 aa13.88□□□□□ -0.19
SREBF1-204ENST00000395756 AMMECR1LQ6DCA0 310 aa13.88□□□□□ -0.19
SREBF1-204ENST00000395756 NIT1Q86X76 327 aa13.88□□□□□ -0.19
SREBF1-204ENST00000395756 RNF182Q8N6D2 247 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms