RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 TRGV9Q99603 122 aa6.53□□□□□ -1.36
TRPS1-203ENST00000395715 USP17L23D6RBM5 183 aa6.53□□□□□ -1.36
TRPS1-203ENST00000395715 CISD3P0C7P0 127 aa6.53□□□□□ -1.36
TRPS1-203ENST00000395715 LY6G6FQ5SQ64 297 aa6.53□□□□□ -1.36
TRPS1-203ENST00000395715 FAM216BQ8N7L0 139 aa6.53□□□□□ -1.36
TRPS1-203ENST00000395715 ALS2Q96Q42 1657 aa6.52□□□□□ -1.36
TRPS1-203ENST00000395715 PDE6HQ13956 83 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 CR1LQ2VPA4 569 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 HS3ST6Q96QI5 342 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 MESP1Q9BRJ9 268 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 WDR83OSQ9Y284 106 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 TCF20Q9UGU0 1960 aaKnown RBP6.52□□□□□ -1.37
TRPS1-203ENST00000395715 TEN1Q86WV5 123 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 SRXN1Q9BYN0 137 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 LOC285556D6RIA3 1793 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 BCORQ6W2J9 1755 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 PATJQ8NI35 1801 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 LYPD6Q86Y78 171 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 TNRC6BQ9UPQ9 1833 aaKnown RBP6.52□□□□□ -1.37
TRPS1-203ENST00000395715 ATP1A1-AS1Q5TC04 95 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 Q6ZWC4 215 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 MRPL35Q9NZE8 188 aaKnown RBP6.52□□□□□ -1.37
TRPS1-203ENST00000395715 H0Y9J4 135 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 NHSQ6T4R5 1651 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 RNF152Q8N8N0 203 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 RMI2Q96E14 147 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 A0A1B0GUS0 222 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 NTN3O00634 580 aaPredicted RBP6.52□□□□□ -1.37
TRPS1-203ENST00000395715 SIGLEC12Q96PQ1 595 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 TIMM17AQ99595 171 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 IGHV2OR16-5A0A0B4J2B6 119 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 IGLC7A0M8Q6 106 aa6.52□□□□□ -1.37
TRPS1-203ENST00000395715 XIRP1Q702N8 1843 aaKnown RBP6.52□□□□□ -1.37
TRPS1-203ENST00000395715 TMEM75Q8N9X5 138 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 MSRB2Q9Y3D2 182 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 IGHV2-70DA0A0C4DH43 119 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 GNLYP22749 145 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 CFPP27918 469 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 UBE2E1P51965 193 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 Q6ZT83 130 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 RNF166Q96A37 237 aaPredicted RBP6.51□□□□□ -1.37
TRPS1-203ENST00000395715 RREB1Q92766 1687 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 PSME4Q14997 1843 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 FAM201AQ5SY85 155 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 SIGLEC9Q9Y336 463 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 ICOSQ9Y6W8 199 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 PKD1L3Q7Z443 1732 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 IGKV1D-13A0A0B4J2D9 117 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 ETDCA0A1B0GVM5 59 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 PRSS46E5RG02 174 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 IGKV1-13P0DP09 117 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 CRYGSP22914 178 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 DYNAPQ8N1N2 210 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 SIGLEC8Q9NYZ4 499 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 HOXB4P17483 251 aaPredicted RBP6.51□□□□□ -1.37
TRPS1-203ENST00000395715 PSG7Q13046 419 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 LINC01545Q5VT33 79 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 SLC25A29Q8N8R3 303 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 REG4Q9BYZ8 158 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 RFNGQ9Y644 331 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 TRAV23DV6A0A075B6W5 121 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 UQCRQO14949 82 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 FAM186AA6NE01 2351 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 IGHV3-16A0A0C4DH30 117 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 F5H768 121 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 DKK1O94907 266 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 RPP25LQ8N5L8 163 aaKnown RBP6.51□□□□□ -1.37
TRPS1-203ENST00000395715 H0YIZ8 118 aa6.51□□□□□ -1.37
TRPS1-203ENST00000395715 IGKV1-5P01602 117 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 CFHR3Q02985 330 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 BSPH1Q075Z2 132 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 LINC01620Q4KN68 170 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 BTCP35070 178 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 TMEM61Q8N0U2 210 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 NRTNQ99748 197 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 DKK2Q9UBU2 259 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 METRNQ9UJH8 293 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 JMJD7-PLA2G4BH0Y9G9 81 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 FOXI1Q12951 378 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 C4orf48Q5BLP8 95 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 AHDC1Q5TGY3 1603 aaPredicted RBP6.5□□□□□ -1.37
TRPS1-203ENST00000395715 TRAV4A0A0B4J268 109 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 TMEM213A2RRL7 107 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 H0YGX0 51 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 CCL3L1P16619 93 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 C9orf47Q6ZRZ4 202 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 QSER1Q2KHR3 1735 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 SDHAF1A6NFY7 115 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 ANGP03950 147 aaKnown RBP6.5□□□□□ -1.37
TRPS1-203ENST00000395715 CLPSL2Q6UWE3 100 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 ZCCHC24Q8N2G6 241 aaKnown RBP6.5□□□□□ -1.37
TRPS1-203ENST00000395715 FAM110AQ9BQ89 295 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 UPK3BQ9BT76 320 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 PNRC2Q9NPJ4 139 aaKnown RBP6.5□□□□□ -1.37
TRPS1-203ENST00000395715 TRAV26-2A0A0B4J265 109 aa6.5□□□□□ -1.37
TRPS1-203ENST00000395715 RPL18AQ02543 176 aaKnown RBP6.5□□□□□ -1.37
TRPS1-203ENST00000395715 NDUFV3P56181 108 aaKnown RBP6.49□□□□□ -1.37
TRPS1-203ENST00000395715 Q86TA4 180 aa6.49□□□□□ -1.37
TRPS1-203ENST00000395715 CENPVL3A0A0U1RRI6 287 aa6.49□□□□□ -1.37
TRPS1-203ENST00000395715 VWC2Q2TAL6 325 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms