RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 SH2D1AO60880 128 aa12.93□□□□□ -0.34
CNP-201ENST00000393888 PAX8Q06710 450 aa12.93□□□□□ -0.34
CNP-201ENST00000393888 TWIST1Q15672 202 aa12.93□□□□□ -0.34
CNP-201ENST00000393888 SAMD13Q5VXD3 122 aa12.93□□□□□ -0.34
CNP-201ENST00000393888 OR5A1Q8NGJ0 315 aa12.93□□□□□ -0.34
CNP-201ENST00000393888 SCNM1Q9BWG6 230 aa12.93□□□□□ -0.34
CNP-201ENST00000393888 FAM215AQ9Y5M1 114 aa12.93□□□□□ -0.34
CNP-201ENST00000393888 U3KQK5 164 aa12.93□□□□□ -0.34
CNP-201ENST00000393888 I3L2K1 104 aa12.92□□□□□ -0.34
CNP-201ENST00000393888 SIVA1O15304 175 aa12.92□□□□□ -0.34
CNP-201ENST00000393888 IGFBPL1Q8WX77 278 aa12.92□□□□□ -0.34
CNP-201ENST00000393888 IL4P05112 153 aa12.92□□□□□ -0.34
CNP-201ENST00000393888 PPP1R27Q86WC6 154 aa12.92□□□□□ -0.34
CNP-201ENST00000393888 SHANK2-AS3Q9BTD1 123 aa12.92□□□□□ -0.34
CNP-201ENST00000393888 MSRB1Q9NZV6 116 aa12.92□□□□□ -0.34
CNP-201ENST00000393888 PCNX1Q96RV3 2341 aa12.91□□□□□ -0.34
CNP-201ENST00000393888 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
CNP-201ENST00000393888 WI2-2373I1.2A0A1W2PRP0 233 aa12.91□□□□□ -0.34
CNP-201ENST00000393888 C17orf100A8MU93 164 aa12.91□□□□□ -0.34
CNP-201ENST00000393888 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
CNP-201ENST00000393888 IGHV1-8P0DP01 117 aa12.91□□□□□ -0.34
CNP-201ENST00000393888 LOXP28300 417 aaPredicted RBP12.91□□□□□ -0.34
CNP-201ENST00000393888 LINC00311Q8N616 119 aa12.91□□□□□ -0.34
CNP-201ENST00000393888 TRBV6-1A0A0K0K1D8 114 aa12.91□□□□□ -0.34
CNP-201ENST00000393888 CRYGBP07316 175 aa12.91□□□□□ -0.34
CNP-201ENST00000393888 KLF17Q5JT82 389 aaPredicted RBP12.91□□□□□ -0.34
CNP-201ENST00000393888 IGFL4Q6B9Z1 124 aa12.91□□□□□ -0.34
CNP-201ENST00000393888 TMEM178BH3BS89 294 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 CIDEAO60543 219 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 AZU1P20160 251 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 SMAGPQ0VAQ4 97 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 PLGLAQ15195 96 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 Q6AWC8 147 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 Q8TAT8 98 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 H3BRN7 92 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 EVI2AP22794 236 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 DLX6P56179 175 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 DEFB109BQ30KR1 87 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 GTSCR1Q86UQ5 136 aa12.9□□□□□ -0.34
CNP-201ENST00000393888 NHP2Q9NX24 153 aaKnown RBP12.9□□□□□ -0.34
CNP-201ENST00000393888 FTH1P19P0C7X4 201 aa12.89□□□□□ -0.35
CNP-201ENST00000393888 EGR2P11161 476 aaPredicted RBP12.89□□□□□ -0.35
CNP-201ENST00000393888 ADIPOQQ15848 244 aa12.89□□□□□ -0.35
CNP-201ENST00000393888 ZNF491Q8N8L2 437 aa12.89□□□□□ -0.35
CNP-201ENST00000393888 CHTOPQ9Y3Y2 248 aaKnown RBP12.89□□□□□ -0.35
CNP-201ENST00000393888 POLEQ07864 2286 aa12.89□□□□□ -0.35
CNP-201ENST00000393888 NPIPB5A8MRT5 1133 aa12.89□□□□□ -0.35
CNP-201ENST00000393888 LEPP41159 167 aa12.89□□□□□ -0.35
CNP-201ENST00000393888 CNIH1O95406 144 aa12.88□□□□□ -0.35
CNP-201ENST00000393888 PRSS1P07477 247 aa12.88□□□□□ -0.35
CNP-201ENST00000393888 MTURNQ8N3F0 131 aa12.88□□□□□ -0.35
CNP-201ENST00000393888 RNF125Q96EQ8 232 aa12.88□□□□□ -0.35
CNP-201ENST00000393888 CHAC1Q9BUX1 264 aa12.88□□□□□ -0.35
CNP-201ENST00000393888 GATA1P15976 413 aaPredicted RBP12.88□□□□□ -0.35
CNP-201ENST00000393888 ZNF80P51504 273 aaPredicted RBP12.88□□□□□ -0.35
CNP-201ENST00000393888 S100A7AQ86SG5 101 aa12.88□□□□□ -0.35
CNP-201ENST00000393888 ZGRF1Q86YA3 2104 aa12.88□□□□□ -0.35
CNP-201ENST00000393888 IGHV1-3A0A0C4DH29 117 aa12.87□□□□□ -0.35
CNP-201ENST00000393888 K7EIM0 57 aa12.87□□□□□ -0.35
CNP-201ENST00000393888 MRPS12O15235 138 aaKnown RBP12.87□□□□□ -0.35
CNP-201ENST00000393888 COX7A1P24310 79 aa12.87□□□□□ -0.35
CNP-201ENST00000393888 HHLA3Q9XRX5 114 aa12.87□□□□□ -0.35
CNP-201ENST00000393888 PPIFP30405 207 aaKnown RBP12.87□□□□□ -0.35
CNP-201ENST00000393888 WFDC2Q14508 124 aa12.87□□□□□ -0.35
CNP-201ENST00000393888 TMEM155Q4W5P6 130 aa12.87□□□□□ -0.35
CNP-201ENST00000393888 ZNF562Q6V9R5 426 aa12.87□□□□□ -0.35
CNP-201ENST00000393888 IGFL2Q6UWQ7 119 aa12.86□□□□□ -0.35
CNP-201ENST00000393888 AAMDCQ9H7C9 122 aa12.86□□□□□ -0.35
CNP-201ENST00000393888 TSSC4Q9Y5U2 329 aaPredicted RBP12.86□□□□□ -0.35
CNP-201ENST00000393888 K7EM74 188 aa12.86□□□□□ -0.35
CNP-201ENST00000393888 ODF1Q14990 250 aa12.86□□□□□ -0.35
CNP-201ENST00000393888 FOXC2Q99958 501 aa12.86□□□□□ -0.35
CNP-201ENST00000393888 TRBV25-1A0A075B6N4 114 aa12.85□□□□□ -0.35
CNP-201ENST00000393888 SMIM17P0DL12 118 aa12.85□□□□□ -0.35
CNP-201ENST00000393888 HLA-DMBP28068 263 aa12.85□□□□□ -0.35
CNP-201ENST00000393888 C8orf31Q8N9H6 132 aa12.85□□□□□ -0.35
CNP-201ENST00000393888 VGLL1Q99990 258 aa12.85□□□□□ -0.35
CNP-201ENST00000393888 SH2D6Q7Z4S9 175 aa12.85□□□□□ -0.35
CNP-201ENST00000393888 SVEP1Q4LDE5 3571 aa12.85□□□□□ -0.35
CNP-201ENST00000393888 AGRNO00468 2067 aa12.85□□□□□ -0.35
CNP-201ENST00000393888 IGHV3OR16-8A0A075B7F1 116 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 C16orf97H3BN30 126 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 IGHV3-23P01764 117 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 PHLDA1Q8WV24 401 aaPredicted RBP12.84□□□□□ -0.35
CNP-201ENST00000393888 TNFRSF13BO14836 293 aaPredicted RBP12.84□□□□□ -0.35
CNP-201ENST00000393888 ORM1P02763 201 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 BSPH1Q075Z2 132 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 ZC2HC1BQ5TFG8 222 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 AMTNQ6UX39 209 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 LYPD1Q8N2G4 141 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 RNF185Q96GF1 192 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 TMEM160Q9NX00 188 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 ATMQ13315 3056 aa12.84□□□□□ -0.35
CNP-201ENST00000393888 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.83□□□□□ -0.35
CNP-201ENST00000393888 C3orf36Q3SXR2 165 aa12.83□□□□□ -0.35
CNP-201ENST00000393888 TMEM108Q6UXF1 575 aa12.83□□□□□ -0.35
CNP-201ENST00000393888 ZNF575Q86XF7 245 aa12.83□□□□□ -0.35
CNP-201ENST00000393888 PRR25Q96S07 402 aa12.83□□□□□ -0.35
CNP-201ENST00000393888 SIGMAR1Q99720 223 aa12.83□□□□□ -0.35
CNP-201ENST00000393888 MAP1LC3AQ9H492 121 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms