RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ABCC6O95255 1503 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 MAP3K4Q9Y6R4 1608 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 ADGBQ8N7X0 1667 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 DLC1Q96QB1 1528 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 KIF14Q15058 1648 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 hCG_2014768A0A024R1R8 64 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TRAV21A0A0B4J279 112 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TRBV10-1A0A0K0K1A3 114 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 A0A1B0GX30 115 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TRDV1A0A1B0GX56 115 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM213A2RRL7 107 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 FAM24AA6NFZ4 105 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 K7EPI3 171 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 LST1O00453 97 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 RAB29O14966 203 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 HLA-DRAP01903 254 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 MYL1P05976 194 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR10J4P0C629 311 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 GKN3PP0CG01 181 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 STAG3L2P0CL84 134 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 STAG3L3P0CL85 134 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 HSPA5P11021 654 aaKnown RBP-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 SLC25A4P12235 298 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 GTF2F2P13984 249 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 NQO1P15559 274 aaKnown RBP-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 GNA11P29992 359 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 ATP5OP48047 213 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 SULT1A1P50225 295 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR10A3P58181 314 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 SEC61GP60059 68 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 REEP5Q00765 189 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 FADDQ13158 208 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 UBE2V2Q15819 145 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 ANKRD20A4Q4UJ75 823 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 ANKRD20A2Q5SQ80 823 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 ANKRD20A1Q5TYW2 823 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 ANKRD20A3Q5VUR7 823 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 MIC13Q5XKP0 118 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TTC23LQ6PF05 361 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 KDELC1Q6UW63 502 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM91Q6ZNR0 172 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TAS2R42Q7RTR8 314 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 PDPNQ86YL7 162 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 C20orf196Q8IYI0 205 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 FAM9BQ8IZU0 186 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMCO5AQ8N6Q1 288 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 SPTSSBQ8NFR3 76 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR11H2Q8NH07 326 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM234Q8WY98 164 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 GGHQ92820 318 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 IMMP2LQ96T52 175 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 VPS25Q9BRG1 176 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 LINC00467Q9BRT7 94 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 THTPAQ9BU02 230 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 ATG5Q9H1Y0 275 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM165Q9HC07 324 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 FAM114A2Q9NRY5 505 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 C3orf18Q9UK00 162 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 GINS2Q9Y248 185 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMED5Q9Y3A6 229 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 SERP1Q9Y6X1 66 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 NWD2Q9ULI1 1742 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 ANKRD36BQ8N2N9 1353 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 PARP14Q460N5 1801 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 FOCADQ5VW36 1801 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 SCN7AQ01118 1682 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 NHSQ6T4R5 1651 aa-2.15□□□□□ -2.75
RNU6-540P-201ENST00000384622 NESP48681 1621 aa-2.16□□□□□ -2.75
RNU6-540P-201ENST00000384622 TARBP1Q13395 1621 aaKnown RBP-2.16□□□□□ -2.75
RNU6-540P-201ENST00000384622 MON2Q7Z3U7 1717 aa-2.16□□□□□ -2.75
RNU6-540P-201ENST00000384622 A0A087X0M5 115 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 TRAV19A0A0A6YYK7 116 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 A6NCN8 305 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 HIGD1CA8MV81 97 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 H0Y980 276 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 M0R135 149 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 EIF3HO15372 352 aaKnown RBP eCLIP-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 UBL3O95164 117 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 RBP1P09455 135 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 HIST1H1CP16403 213 aaKnown RBP-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 SNCAP37840 140 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 CSE1LP55060 971 aaKnown RBP-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 TMBIM6P55061 237 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 PIGPP57054 158 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 TAS2R60P59551 318 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 ELOF1P60002 83 aaKnown RBP-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 UBE2KP61086 200 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 HIST1H4AP62805 103 aaKnown RBP-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 SSBP1Q04837 148 aaKnown RBP-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR2F1Q13607 317 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 FLOT2Q14254 428 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 C5orf64Q2M2E5 130 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 IDNKQ5T6J7 187 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 CAVIN1Q6NZI2 390 aaKnown RBP-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 C3orf33Q6P1S2 294 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 MMGT1Q8N4V1 131 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 SAMD3Q8N6K7 520 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR1L4Q8NGR5 311 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 FAM81AQ8TBF8 368 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 TEX47Q8TBZ9 253 aa-2.16□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 705.1 ms