RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 GNG5P63218 68 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 PMCHL1Q16048 86 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 Q6ZR03 302 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 ATP6V0BQ99437 205 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 SMDT1Q9H4I9 107 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 ARFGEF3Q5TH69 2177 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 GAGE2BQ13066 116 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 ADAMTS9Q9P2N4 1935 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 A0A1B0GTI1 187 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 A8MWV9 139 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 TNFRSF13BO14836 293 aaPredicted RBP7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 SEC11AP67812 179 aa7.31□□□□□ -1.24
LIMCH1-202ENST00000381753 RASL10AQ92737 203 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 SPXQ9BT56 116 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 CYSLTR1Q9Y271 337 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 LCTP09848 1927 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 CFPP27918 469 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 COQ2Q96H96 371 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 TEX43Q6ZNM6 134 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 Q6ZSV7 163 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 TRAV8-1A0A0A6YYK1 113 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 F6UB75 175 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 J3QL48 77 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 IGFBP3P17936 291 aaPredicted RBP7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 MEF2BQ02080 365 aaPredicted RBP7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 KIAA1644Q3SXP7 199 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 PMCHL2Q9BQD1 86 aa7.3□□□□□ -1.24
LIMCH1-202ENST00000381753 NAPSAO96009 420 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 TFF3Q07654 80 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 TMEM91Q6ZNR0 172 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 SMPXQ9UHP9 88 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 C7orf77A4D0Y5 90 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 FAM90A9PA6NNJ1 464 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 PYYP10082 97 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 HLA-DMBP28068 263 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 PLP1P60201 277 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 HBBP68871 147 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 NEGR1Q7Z3B1 354 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 ST6GAL2Q96JF0 529 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 TRGV9Q99603 122 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 MS4A6AQ9H2W1 248 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 NDUFA12Q9UI09 145 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 ARID2Q68CP9 1835 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 DERL1Q9BUN8 251 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 SPG11Q96JI7 2443 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 ROS1P08922 2347 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 TBX6O95947 436 aaPredicted RBP7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 GZMMP51124 257 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 TAL2Q16559 108 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 IGFBPL1Q8WX77 278 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 LY96Q9Y6Y9 160 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 ABCA1O95477 2261 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 FER1L5A0AVI2 2057 aa7.29□□□□□ -1.24
LIMCH1-202ENST00000381753 BUB3O43684 328 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 RND3P61587 244 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 Q6AWC8 147 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 C18orf15Q96N68 181 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 MARVELD1Q9BSK0 173 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 MRPL18Q9H0U6 180 aaKnown RBP7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 C5orf63A6NC05 138 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 ZNF414Q96IQ9 312 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 HSPB9Q9BQS6 159 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 CTSZQ9UBR2 303 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 WNK2Q9Y3S1 2297 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 ANKRD36A6QL64 1941 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 K7ERU9 68 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 CENPWQ5EE01 88 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 ZNF493Q6ZR52 646 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 LINC00482Q8N8I6 264 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 PARLQ9H300 379 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 LSM4Q9Y4Z0 139 aaKnown RBP7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 DOCK10Q96BY6 2186 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 F2Z2F3 143 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 TSKUQ8WUA8 353 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 SMIM2Q9BVW6 85 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 U3KQE9 123 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 A0A1B0GUT8 65 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 CCL1P22362 96 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 SPATA45Q537H7 98 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 SLC25A34Q6PIV7 304 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 OR11H6Q8NGC7 330 aa7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 ELF5Q9UKW6 265 aaPredicted RBP7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 SONP18583 2426 aaKnown RBP7.28□□□□□ -1.24
LIMCH1-202ENST00000381753 TRBV9A0A0B4J1U6 114 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 A0A1B0GW15 77 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 Q8TAT8 98 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 ADAMTSL5Q6ZMM2 481 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 UBE2D4Q9Y2X8 147 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 COX11Q9Y6N1 276 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 IGHV3-64A0A075B6Q5 118 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 IGHV3-38A0A0C4DH36 116 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 A0A1B0GV90 55 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 P2RY4P51582 365 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 CACNA1DQ01668 2161 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 AJUBAQ96IF1 538 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 CAMK2N2Q96S95 79 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 SPRY4Q9C004 299 aa7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 MRPS18AQ9NVS2 196 aaKnown RBP7.27□□□□□ -1.25
LIMCH1-202ENST00000381753 ZNF319Q9P2F9 582 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms