RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 UBE2E1P51965 193 aa13.47□□□□□ -0.25
PDX1-201ENST00000381033 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
PDX1-201ENST00000381033 BRD3OSQ6XYD6 125 aa13.47□□□□□ -0.25
PDX1-201ENST00000381033 ABCA12Q86UK0 2595 aa13.47□□□□□ -0.25
PDX1-201ENST00000381033 IGLV11-55A0A075B6I3 123 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 NUPR1O60356 82 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 IGLC2P0DOY2 106 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 IGLC3P0DOY3 106 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 IER3P46695 156 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 MINOS1Q5TGZ0 78 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 NEGR1Q7Z3B1 354 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 BAGE2Q86Y30 109 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 ZNF491Q8N8L2 437 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 BBC3Q96PG8 261 aaPredicted RBP13.46□□□□□ -0.25
PDX1-201ENST00000381033 VPREB3Q9UKI3 123 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 EPDR1Q9UM22 224 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 MINOS1-NBL1R4GNA1 71 aa13.46□□□□□ -0.25
PDX1-201ENST00000381033 CENPVL3A0A0U1RRI6 287 aa13.46□□□□□ -0.26
PDX1-201ENST00000381033 CNN1P51911 297 aaKnown RBP13.46□□□□□ -0.26
PDX1-201ENST00000381033 EBI3Q14213 229 aa13.46□□□□□ -0.26
PDX1-201ENST00000381033 TMEM219Q86XT9 240 aa13.46□□□□□ -0.26
PDX1-201ENST00000381033 Q9H3A6 140 aa13.46□□□□□ -0.26
PDX1-201ENST00000381033 OR2T8A6NH00 312 aa13.45□□□□□ -0.26
PDX1-201ENST00000381033 TAX1BP3O14907 124 aa13.45□□□□□ -0.26
PDX1-201ENST00000381033 CTRLP40313 264 aa13.45□□□□□ -0.26
PDX1-201ENST00000381033 RPEL1Q2QD12 228 aa13.45□□□□□ -0.26
PDX1-201ENST00000381033 TMEM256Q8N2U0 113 aa13.45□□□□□ -0.26
PDX1-201ENST00000381033 PTPN13Q12923 2485 aa13.45□□□□□ -0.26
PDX1-201ENST00000381033 HSD52Q0P140 79 aa13.45□□□□□ -0.26
PDX1-201ENST00000381033 LINC00322Q6ZN03 302 aaPredicted RBP13.45□□□□□ -0.26
PDX1-201ENST00000381033 PTH2Q96A98 100 aa13.45□□□□□ -0.26
PDX1-201ENST00000381033 CCL19Q99731 98 aa13.45□□□□□ -0.26
PDX1-201ENST00000381033 CHRDL1Q9BU40 450 aa13.45□□□□□ -0.26
PDX1-201ENST00000381033 ECSCRQ19T08 205 aa13.44□□□□□ -0.26
PDX1-201ENST00000381033 ANKRD17O75179 2603 aaKnown RBP13.44□□□□□ -0.26
PDX1-201ENST00000381033 NBPF19A0A087WUL8 3843 aa13.44□□□□□ -0.26
PDX1-201ENST00000381033 G3V318 75 aa13.44□□□□□ -0.26
PDX1-201ENST00000381033 FCGR2BP31994 310 aaPredicted RBP13.44□□□□□ -0.26
PDX1-201ENST00000381033 MRPL54Q6P161 138 aaKnown RBP13.44□□□□□ -0.26
PDX1-201ENST00000381033 SRSF8Q9BRL6 282 aaKnown RBP13.44□□□□□ -0.26
PDX1-201ENST00000381033 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.43□□□□□ -0.26
PDX1-201ENST00000381033 KIAA1644Q3SXP7 199 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 SPATA45Q537H7 98 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 Q56UQ5 140 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 VN1R17PQ8TDU5 208 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 RNF125Q96EQ8 232 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 TMUB1Q9BVT8 246 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 IGHV4-30-2A0A087WSY4 118 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 FAM106CPP0CH98 169 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 TSPOP30536 169 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 GTF2H5Q6ZYL4 71 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 TTC9CQ8N5M4 171 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 OSTCQ9NRP0 149 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 LINC00527Q9UJ94 153 aa13.43□□□□□ -0.26
PDX1-201ENST00000381033 NPIPB5A8MRT5 1133 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 F2Z2F3 143 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 NPFFO15130 113 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 ATP6V0E1O15342 81 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 CD300EQ496F6 205 aaPredicted RBP13.42□□□□□ -0.26
PDX1-201ENST00000381033 GAGE12HA6NDE8 117 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 SNURFLB1AK76 121 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 AMTP48728 403 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 UBE2G1P62253 170 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 PSG9Q00887 426 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 RNF183Q96D59 192 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 BTF3L4Q96K17 158 aa13.42□□□□□ -0.26
PDX1-201ENST00000381033 MRPL18Q9H0U6 180 aaKnown RBP13.42□□□□□ -0.26
PDX1-201ENST00000381033 MRPL16Q9NX20 251 aaKnown RBP13.42□□□□□ -0.26
PDX1-201ENST00000381033 UBR5O95071 2799 aaPredicted RBP13.41□□□□□ -0.26
PDX1-201ENST00000381033 OOSP1A8MZH6 123 aa13.41□□□□□ -0.26
PDX1-201ENST00000381033 C21orf62Q9NYP8 219 aa13.41□□□□□ -0.26
PDX1-201ENST00000381033 TRAV40A0A0B4J280 105 aa13.41□□□□□ -0.26
PDX1-201ENST00000381033 TCRAP04437 139 aa13.41□□□□□ -0.26
PDX1-201ENST00000381033 YPEL3P61236 119 aaPredicted RBP13.41□□□□□ -0.26
PDX1-201ENST00000381033 SHANK2-AS3Q9BTD1 123 aa13.41□□□□□ -0.26
PDX1-201ENST00000381033 C7orf69Q9H7B7 122 aa13.41□□□□□ -0.26
PDX1-201ENST00000381033 ERG28Q9UKR5 140 aa13.41□□□□□ -0.26
PDX1-201ENST00000381033 B5MCH6 92 aa13.4□□□□□ -0.26
PDX1-201ENST00000381033 TP53TG3Q9ULZ0 132 aa13.4□□□□□ -0.26
PDX1-201ENST00000381033 ZNF469Q96JG9 3925 aaPredicted RBP13.4□□□□□ -0.26
PDX1-201ENST00000381033 H3BRN7 92 aa13.4□□□□□ -0.26
PDX1-201ENST00000381033 M0R3E3 92 aa13.4□□□□□ -0.26
PDX1-201ENST00000381033 MFAP4P55083 255 aa13.4□□□□□ -0.26
PDX1-201ENST00000381033 FBXL7Q9UJT9 491 aa13.4□□□□□ -0.26
PDX1-201ENST00000381033 HSPB8Q9UJY1 196 aa13.4□□□□□ -0.26
PDX1-201ENST00000381033 VWC2LB2RUY7 222 aa13.39□□□□□ -0.27
PDX1-201ENST00000381033 CTSGP08311 255 aa13.39□□□□□ -0.27
PDX1-201ENST00000381033 IGHV4-38-2P0DP08 117 aa13.39□□□□□ -0.27
PDX1-201ENST00000381033 CD33P20138 364 aa13.39□□□□□ -0.27
PDX1-201ENST00000381033 GOLT1AQ6ZVE7 132 aa13.39□□□□□ -0.27
PDX1-201ENST00000381033 Q6ZWC4 215 aa13.39□□□□□ -0.27
PDX1-201ENST00000381033 SMIM27A0A1W2PRY6 76 aa13.39□□□□□ -0.27
PDX1-201ENST00000381033 HIST1H1EP10412 219 aaKnown RBP13.39□□□□□ -0.27
PDX1-201ENST00000381033 CIARTQ8N365 385 aaPredicted RBP13.39□□□□□ -0.27
PDX1-201ENST00000381033 C10orf105Q8TEF2 133 aa13.39□□□□□ -0.27
PDX1-201ENST00000381033 GPR82Q96P67 336 aa13.39□□□□□ -0.27
PDX1-201ENST00000381033 CSDC2Q9Y534 153 aaKnown RBP13.39□□□□□ -0.27
PDX1-201ENST00000381033 WI2-2373I1.2A0A1W2PRP0 233 aa13.38□□□□□ -0.27
PDX1-201ENST00000381033 PAX8Q06710 450 aa13.38□□□□□ -0.27
PDX1-201ENST00000381033 SRSF1Q07955 248 aaKnown RBP eCLIP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms