RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
COL4A3BP-203ENST00000380494 A0A087WWL8 130 aa13.75□□□□□ -0.21
COL4A3BP-203ENST00000380494 IGFL4Q6B9Z1 124 aa13.75□□□□□ -0.21
COL4A3BP-203ENST00000380494 NDUFS7O75251 213 aa13.75□□□□□ -0.21
COL4A3BP-203ENST00000380494 UBL5Q9BZL1 73 aa13.75□□□□□ -0.21
COL4A3BP-203ENST00000380494 K7ERJ3 54 aa13.75□□□□□ -0.21
COL4A3BP-203ENST00000380494 INSP01308 110 aa13.75□□□□□ -0.21
COL4A3BP-203ENST00000380494 K7EMI3 77 aa13.74□□□□□ -0.21
COL4A3BP-203ENST00000380494 C20orf78Q9BR46 151 aa13.74□□□□□ -0.21
COL4A3BP-203ENST00000380494 ZNF747Q9BV97 191 aa13.74□□□□□ -0.21
COL4A3BP-203ENST00000380494 ANKRD29Q8N6D5 301 aa13.74□□□□□ -0.21
COL4A3BP-203ENST00000380494 ACYP1P07311 99 aa13.74□□□□□ -0.21
COL4A3BP-203ENST00000380494 NDPQ00604 133 aa13.74□□□□□ -0.21
COL4A3BP-203ENST00000380494 IL17RELQ6ZVW7 336 aa13.74□□□□□ -0.21
COL4A3BP-203ENST00000380494 NPYP01303 97 aa13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 C1orf159Q96HA4 380 aa13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 CARD19Q96LW7 228 aa13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 PRR25Q96S07 402 aa13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 LYNX1G3V0Z9 82 aa13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 RHODO00212 210 aa13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 LYNX1P0DP58 116 aa13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 FXYD5Q96DB9 178 aa13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 XIRP1Q702N8 1843 aaKnown RBP13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 SRSF2Q01130 221 aaKnown RBP13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 SS18Q15532 418 aa13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 ZNF625Q96I27 306 aaPredicted RBP13.73□□□□□ -0.21
COL4A3BP-203ENST00000380494 K7EM74 188 aa13.72□□□□□ -0.21
COL4A3BP-203ENST00000380494 SMIM2Q9BVW6 85 aa13.72□□□□□ -0.21
COL4A3BP-203ENST00000380494 KNL1Q8NG31 2342 aa13.72□□□□□ -0.21
COL4A3BP-203ENST00000380494 LINC01545Q5VT33 79 aa13.72□□□□□ -0.21
COL4A3BP-203ENST00000380494 FAM110DQ8TAY7 271 aaPredicted RBP13.72□□□□□ -0.21
COL4A3BP-203ENST00000380494 TRGV1A0A0A0MS02 117 aa13.72□□□□□ -0.21
COL4A3BP-203ENST00000380494 SS18L2Q9UHA2 77 aa13.72□□□□□ -0.21
COL4A3BP-203ENST00000380494 PRR20EP86478 221 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 PRR20CP86479 221 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 PRR20DP86480 221 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 PRR20BP86481 221 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 PRR20AP86496 221 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 C15orf53Q8NAA6 179 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 SHISA9B4DS77 424 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 Q0VFX4 171 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 MDS2Q8NDY4 140 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 Q8TCH9 128 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 SCRT2Q9NQ03 307 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 MYOFQ9NZM1 2061 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 F8WEM9 126 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 IGLV3-1P01715 115 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 KLRD1Q13241 179 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 ZC2HC1AQ96GY0 325 aa13.71□□□□□ -0.21
COL4A3BP-203ENST00000380494 TRAV13-1A0A0B4J241 112 aa13.71□□□□□ -0.22
COL4A3BP-203ENST00000380494 CSRP1P21291 193 aaKnown RBP13.71□□□□□ -0.22
COL4A3BP-203ENST00000380494 HTN3P15516 51 aa13.7□□□□□ -0.22
COL4A3BP-203ENST00000380494 RHPN1-AS1Q9BWJ2 59 aa13.7□□□□□ -0.22
COL4A3BP-203ENST00000380494 DAZ1Q9NQZ3 744 aaKnown RBP13.7□□□□□ -0.22
COL4A3BP-203ENST00000380494 UNC13CQ8NB66 2214 aa13.7□□□□□ -0.22
COL4A3BP-203ENST00000380494 TRAV13-2A0A0B4J235 113 aa13.7□□□□□ -0.22
COL4A3BP-203ENST00000380494 C3orf36Q3SXR2 165 aa13.7□□□□□ -0.22
COL4A3BP-203ENST00000380494 TMEM126AQ9H061 195 aa13.7□□□□□ -0.22
COL4A3BP-203ENST00000380494 DEFB104AQ8WTQ1 72 aa13.7□□□□□ -0.22
COL4A3BP-203ENST00000380494 UNQ6494/PRO21346Q6UXR6 183 aa13.7□□□□□ -0.22
COL4A3BP-203ENST00000380494 MORN5Q5VZ52 161 aa13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 MBD3L4A6NDZ8 208 aaPredicted RBP13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 MBD3L3A6NE82 208 aaPredicted RBP13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 MBD3L5A6NJ08 208 aaPredicted RBP13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 MBD3L2Q8NHZ7 208 aaPredicted RBP13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 DKK2Q9UBU2 259 aa13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 WIPF3A6NGB9 483 aa13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 J3QQQ9 107 aa13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 GATA4P43694 442 aa13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 KIF26BQ2KJY2 2108 aa13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 NDUFA12Q9UI09 145 aa13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 LINC00311Q8N616 119 aa13.69□□□□□ -0.22
COL4A3BP-203ENST00000380494 DSCR9P59020 149 aa13.68□□□□□ -0.22
COL4A3BP-203ENST00000380494 RBMY1FQ15415 496 aaKnown RBP13.68□□□□□ -0.22
COL4A3BP-203ENST00000380494 KIAA0100Q14667 2235 aaKnown RBP13.68□□□□□ -0.22
COL4A3BP-203ENST00000380494 TSC2P49815 1807 aa13.68□□□□□ -0.22
COL4A3BP-203ENST00000380494 B5MCH6 92 aa13.68□□□□□ -0.22
COL4A3BP-203ENST00000380494 SDHAF1A6NFY7 115 aa13.68□□□□□ -0.22
COL4A3BP-203ENST00000380494 A0A1W2PRX2 142 aa13.68□□□□□ -0.22
COL4A3BP-203ENST00000380494 IGHG3P01860 377 aa13.68□□□□□ -0.22
COL4A3BP-203ENST00000380494 EFNA4P52798 201 aa13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 ARTNQ5T4W7 220 aa13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 LINC00527Q9UJ94 153 aa13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 TDRD6O60522 2096 aaKnown RBP13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 FREM3P0C091 2139 aa13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 IGLL5B9A064 214 aa13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 IGLC1P0CG04 106 aa13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 CFC1BP0CG36 223 aa13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 CFC1P0CG37 223 aa13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 C17orf58Q2M2W7 97 aa13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 NTN5Q8WTR8 489 aaPredicted RBP13.67□□□□□ -0.22
COL4A3BP-203ENST00000380494 LTBRP36941 435 aa13.66□□□□□ -0.22
COL4A3BP-203ENST00000380494 POU2AF1Q16633 256 aa13.66□□□□□ -0.22
COL4A3BP-203ENST00000380494 AMTNQ6UX39 209 aa13.66□□□□□ -0.22
COL4A3BP-203ENST00000380494 C15orf65H3BRN8 121 aa13.66□□□□□ -0.22
COL4A3BP-203ENST00000380494 RPL32P62910 135 aaKnown RBP13.66□□□□□ -0.22
COL4A3BP-203ENST00000380494 SBF1O95248 1867 aa13.66□□□□□ -0.22
COL4A3BP-203ENST00000380494 TRAV26-2A0A0B4J265 109 aa13.66□□□□□ -0.22
COL4A3BP-203ENST00000380494 ANKRD39Q53RE8 183 aa13.66□□□□□ -0.22
COL4A3BP-203ENST00000380494 FOXI2Q6ZQN5 318 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms