RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 ASPHD1Q5U4P2 390 aa4.88□□□□□ -1.63
SCN2A-202ENST00000375427 FAM216BQ8N7L0 139 aa4.88□□□□□ -1.63
SCN2A-202ENST00000375427 MPZP25189 248 aa4.88□□□□□ -1.63
SCN2A-202ENST00000375427 GFRA4Q9GZZ7 299 aa4.88□□□□□ -1.63
SCN2A-202ENST00000375427 Q8N976 141 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 TP53TG1Q9Y2A0 90 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 VWDEQ8N2E2 1590 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 IGHV3OR16-13A0A075B7E8 117 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 IGHV3-74A0A0B4J1X5 117 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 NDPQ00604 133 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 SH2D6Q7Z4S9 175 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 FOXF1Q12946 379 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 ZNF362Q5T0B9 420 aaPredicted RBP4.87□□□□□ -1.63
SCN2A-202ENST00000375427 C9orf85Q96MD7 179 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 TMEFF2Q9UIK5 374 aaPredicted RBP4.87□□□□□ -1.63
SCN2A-202ENST00000375427 SIGLEC9Q9Y336 463 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 A0A087WV48 116 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 A0A1B0GTL3 188 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 A6NDX4 124 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 LMO1P25800 156 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 SLC25A47Q6Q0C1 308 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 Q8N9W7 124 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 DENND4CQ5VZ89 1909 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 TRBV5-3A0A0A0MS03 114 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 IGHV3-48P01763 117 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 DEFB109BQ30KR1 87 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 NRN1LQ496H8 165 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 LINC00477Q96M19 166 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 CEP170BQ9Y4F5 1589 aaPredicted RBP4.87□□□□□ -1.63
SCN2A-202ENST00000375427 CCL7P80098 99 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 STPG1Q5TH74 334 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 PRSS57Q6UWY2 283 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 C12orf76Q8N812 135 aaPredicted RBP4.87□□□□□ -1.63
SCN2A-202ENST00000375427 CTHRC1Q96CG8 243 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 C1QTNF5Q9BXJ0 243 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 IGHV3-72A0A0B4J1Y9 119 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 UBE2D1P51668 147 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 PTCRAQ6ISU1 281 aaPredicted RBP4.87□□□□□ -1.63
SCN2A-202ENST00000375427 SEM1Q6ZVN7 128 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 CD177Q8N6Q3 437 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 CELA1Q9UNI1 258 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 ALPK3Q96L96 1907 aa4.87□□□□□ -1.63
SCN2A-202ENST00000375427 TCF20Q9UGU0 1960 aaKnown RBP4.86□□□□□ -1.63
SCN2A-202ENST00000375427 ALKQ9UM73 1620 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 A0A1W2PQD3 144 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 Q86TA4 180 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 NRACQ8N912 160 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 POLR3KQ9Y2Y1 108 aaPredicted RBP4.86□□□□□ -1.63
SCN2A-202ENST00000375427 H2BFSP57053 126 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 LPAL2Q16609 132 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 TEX37Q96LM6 180 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 MRPL36Q9P0J6 103 aaKnown RBP4.86□□□□□ -1.63
SCN2A-202ENST00000375427 PHIPQ8WWQ0 1821 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 IGHV3-35A0A0C4DH35 117 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 TIRAPP58753 221 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 FAM163AQ96GL9 167 aaPredicted RBP4.86□□□□□ -1.63
SCN2A-202ENST00000375427 TMEM133Q9H2Q1 129 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 PRORYQ9H606 182 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 DLL3Q9NYJ7 618 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 WDR83OSQ9Y284 106 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 IGHMP01871 453 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 ZGLP1P0C6A0 271 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 ARMS2P0C7Q2 107 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 Q6ZS49 121 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 C5orf66Q9H5L9 145 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 E9PCH4 1651 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 SPTY2D1-AS1A0A0U1RR47 76 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 LGALS9O00182 355 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 PLA2G10O15496 165 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 C8orf82Q6P1X6 216 aaPredicted RBP4.86□□□□□ -1.63
SCN2A-202ENST00000375427 LILRA6Q6PI73 481 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 OCC1Q8TAD7 63 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 MRPS18CQ9Y3D5 142 aaKnown RBP4.86□□□□□ -1.63
SCN2A-202ENST00000375427 NRXN1Q9ULB1 1477 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 KDM6BO15054 1643 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 FAM208AQ9UK61 1670 aaKnown RBP4.86□□□□□ -1.63
SCN2A-202ENST00000375427 K7EMI3 77 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 LTBRP36941 435 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 MSRB3Q8IXL7 192 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 WIPF2Q8TF74 440 aaPredicted RBP4.86□□□□□ -1.63
SCN2A-202ENST00000375427 RGPD3A6NKT7 1758 aaPredicted RBP4.86□□□□□ -1.63
SCN2A-202ENST00000375427 PSME4Q14997 1843 aa4.86□□□□□ -1.63
SCN2A-202ENST00000375427 SPSB3Q6PJ21 355 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 IGHV4-30-2A0A087WSY4 118 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 TCRBV4S1A1TA0A5B7 111 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 MSGN1A6NI15 193 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 IGHV1-2P23083 117 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 ATP5J2P56134 94 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 PFN3P60673 137 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 RNASE13Q5GAN3 156 aaKnown RBP4.85□□□□□ -1.63
SCN2A-202ENST00000375427 WFDC10BQ8IUB3 73 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 ZNF491Q8N8L2 437 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 PRSS46E5RG02 174 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 CCL3P10147 92 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 PRCDQ00LT1 54 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 LY6EQ16553 131 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 IGHV4-4A0A075B6R2 117 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 WI2-2373I1.2A0A1W2PRP0 233 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 C14orf178Q8N769 122 aaPredicted RBP4.85□□□□□ -1.63
SCN2A-202ENST00000375427 IGHV3-20A0A0C4DH32 117 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms