RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CCL3L1P16619 93 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 LOC101059948A0A1B0GTJ6 334 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 ODF1Q14990 250 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 IMMP1LQ96LU5 166 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 SRXN1Q9BYN0 137 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 IGKV1-12A0A0C4DH73 117 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 IGKV1D-12P01611 117 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 C20orf197Q8N268 126 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 C11orf86A6NJI1 115 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 BLCAPP62952 87 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 DEFB109BQ30KR1 87 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 WFDC9Q8NEX5 89 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 BADQ92934 168 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 MPLKIPQ8TAP9 179 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 FXYD7P58549 80 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 CFAP126Q5VTH2 177 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 HRCT1Q6UXD1 115 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 THAP8Q8NA92 274 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 FXYD5Q96DB9 178 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 Q8TCH9 128 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 LRRK1Q38SD2 2015 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 M0R1W7 72 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 FAM120AOSQ5T036 256 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 PMS2CLQ68D20 193 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 C5orf38Q86SI9 138 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 SMKR1H3BMG3 65 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.28□□□□□ -1.56
UBR4-204ENST00000375254 DIP2AQ14689 1571 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 ZNRF2Q8NHG8 242 aa5.28□□□□□ -1.56
UBR4-204ENST00000375254 TEX49A0A1B0GTD5 131 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 CHD3Q12873 2000 aaKnown RBP5.27□□□□□ -1.57
UBR4-204ENST00000375254 SRRM4A7MD48 611 aaKnown RBP5.27□□□□□ -1.57
UBR4-204ENST00000375254 TMEM61Q8N0U2 210 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 RNF152Q8N8N0 203 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 CSRP2Q16527 193 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 HIGD2BQ4VC39 106 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 ZNF784Q8NCA9 323 aaPredicted RBP5.27□□□□□ -1.57
UBR4-204ENST00000375254 IGKV1D-43A0A0B4J1Z2 117 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 IGKV1D-33P01593 117 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 IGKV1-33P01594 117 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 DAZ2Q13117 558 aaKnown RBP5.27□□□□□ -1.57
UBR4-204ENST00000375254 DAZ4Q86SG3 579 aaKnown RBP5.27□□□□□ -1.57
UBR4-204ENST00000375254 DAZ1Q9NQZ3 744 aaKnown RBP5.27□□□□□ -1.57
UBR4-204ENST00000375254 DAZ3Q9NR90 486 aaKnown RBP5.27□□□□□ -1.57
UBR4-204ENST00000375254 TRGV4A0A0C4DH28 118 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 MRPL36Q9P0J6 103 aaKnown RBP5.27□□□□□ -1.57
UBR4-204ENST00000375254 COX7A2LO14548 114 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 TTTY12Q9BZ98 90 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 DOCK11Q5JSL3 2073 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 PI4KAP42356 2102 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 NRACQ8N912 160 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 MYO7BQ6PIF6 2116 aa5.27□□□□□ -1.57
UBR4-204ENST00000375254 ARHGEF17Q96PE2 2063 aaPredicted RBP5.26□□□□□ -1.57
UBR4-204ENST00000375254 IGHV1-69P01742 117 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 A6NED7 52 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 SIRPDQ9H106 197 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 DIP2BQ9P265 1576 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 IGHV1-58A0A0C4DH39 117 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 IGHV5-10-1A0A0J9YXX1 117 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 COL6A6A6NMZ7 2263 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 C1orf159Q96HA4 380 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 MED13LQ71F56 2210 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 MYO5CQ9NQX4 1742 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 STHQ8IWL8 128 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 PRSS22Q9GZN4 317 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 PLA2G2EQ9NZK7 142 aa5.26□□□□□ -1.57
UBR4-204ENST00000375254 XGP55808 180 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 SHISA2Q6UWI4 295 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 IGHV3-66A0A0C4DH42 116 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 CKAP5Q14008 2032 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 ESM1Q9NQ30 184 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 FAM168AQ92567 244 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 IGHV3OR16-12A0A075B7B8 117 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 CRYGAP11844 174 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 LEAP2Q969E1 77 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 TRIP11Q15643 1979 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 BPY2O14599 106 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 ZNF134P52741 427 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 CSRP1P21291 193 aaKnown RBP5.25□□□□□ -1.57
UBR4-204ENST00000375254 WFDC11Q8NEX6 87 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 KCPQ6ZWJ8 1503 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 MYH1P12882 1939 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 MYH2Q9UKX2 1941 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 MYH4Q9Y623 1939 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 Q9H8V8 135 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 U3KQK5 164 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 MED14OSP0DP75 135 aa5.25□□□□□ -1.57
UBR4-204ENST00000375254 SND1-IT1Q9HBX3 110 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 IGKV1-27A0A075B6S5 117 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 PIK3CD-AS1Q5SR53 167 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 C15orf32Q32M92 178 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 FOXL2NBQ6ZUU3 175 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 GVINP1Q7Z2Y8 2422 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 RALGAPA1Q6GYQ0 2036 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 C17orf100A8MU93 164 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 SRRM5B3KS81 715 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 UBE2E1P51965 193 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 CELA3BP08861 270 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 SPRY4Q9C004 299 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms