RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 BEX4Q9NWD9 120 aaPredicted RBP8.37□□□□□ -1.07
NUP188-201ENST00000372577 V9GYV3 84 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 A0A1B0GWB2 263 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 TMEM238C9JI98 176 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 TCF15Q12870 199 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 MYO7BQ6PIF6 2116 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 NHP2Q9NX24 153 aaKnown RBP8.37□□□□□ -1.07
NUP188-201ENST00000372577 H3BUT2 72 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 MORN3Q6PF18 240 aaPredicted RBP8.37□□□□□ -1.07
NUP188-201ENST00000372577 KLHL30-AS1Q8NEE0 82 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 RNF114Q9Y508 228 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 RIF1Q5UIP0 2472 aaKnown RBP8.37□□□□□ -1.07
NUP188-201ENST00000372577 ADARB2-AS1A8MUL3 147 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 RUSC1-AS1Q66K80 236 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 IL17RELQ6ZVW7 336 aa8.37□□□□□ -1.07
NUP188-201ENST00000372577 RHODO00212 210 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 IGHV2-5P01817 119 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 ARMS2P0C7Q2 107 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 ZNF876PQ49A33 203 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 FAM104BQ5XKR9 115 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 AMN1Q8IY45 258 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 FXYD5Q96DB9 178 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 TOMM7Q9P0U1 55 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.36□□□□□ -1.07
NUP188-201ENST00000372577 EMP1P54849 157 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 NSUN5P1Q3KNT7 163 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 LCNL1Q6ZST4 164 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 LSM4Q9Y4Z0 139 aaKnown RBP8.36□□□□□ -1.07
NUP188-201ENST00000372577 DMRTA1Q5VZB9 504 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 C18orf32Q8TCD1 76 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 TMEM131Q92545 1883 aa8.36□□□□□ -1.07
NUP188-201ENST00000372577 A8MWP6 167 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 TEX43Q6ZNM6 134 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 TRPT1Q86TN4 253 aaKnown RBP8.35□□□□□ -1.07
NUP188-201ENST00000372577 PRR25Q96S07 402 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 CTSZQ9UBR2 303 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 TMEM158Q8WZ71 300 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 CSTL1Q9H114 145 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 TPSG1Q9NRR2 321 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 IGLC7A0M8Q6 106 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 LINC01619G3V211 115 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 TNFRSF6BO95407 300 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 ERCC8Q13216 396 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 MRPL53Q96EL3 112 aaKnown RBP8.35□□□□□ -1.07
NUP188-201ENST00000372577 CYYR1Q96J86 154 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 MALP21145 153 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 C14orf178Q8N769 122 aaPredicted RBP8.35□□□□□ -1.07
NUP188-201ENST00000372577 C20orf144Q9BQM9 153 aa8.35□□□□□ -1.07
NUP188-201ENST00000372577 C8orf86Q6ZUL3 223 aa8.34□□□□□ -1.07
NUP188-201ENST00000372577 RNF223E7ERA6 249 aa8.34□□□□□ -1.07
NUP188-201ENST00000372577 ELANEP08246 267 aa8.34□□□□□ -1.07
NUP188-201ENST00000372577 IGFL4Q6B9Z1 124 aa8.34□□□□□ -1.07
NUP188-201ENST00000372577 TRBV7-9A0A0J9YWB2 115 aa8.34□□□□□ -1.07
NUP188-201ENST00000372577 SYNJ2BPP57105 145 aa8.34□□□□□ -1.07
NUP188-201ENST00000372577 SRSF2Q01130 221 aaKnown RBP8.34□□□□□ -1.07
NUP188-201ENST00000372577 TTC32Q5I0X7 151 aa8.34□□□□□ -1.07
NUP188-201ENST00000372577 NPBQ8NG41 125 aa8.34□□□□□ -1.07
NUP188-201ENST00000372577 INTS1Q8N201 2190 aaKnown RBP8.34□□□□□ -1.07
NUP188-201ENST00000372577 C22orf46C9J442 243 aa8.34□□□□□ -1.08
NUP188-201ENST00000372577 GUSBP1Q15486 140 aa8.34□□□□□ -1.08
NUP188-201ENST00000372577 CD300EQ496F6 205 aaPredicted RBP8.34□□□□□ -1.08
NUP188-201ENST00000372577 Q8N8P6 123 aa8.34□□□□□ -1.08
NUP188-201ENST00000372577 INS-IGF2F8WCM5 200 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
NUP188-201ENST00000372577 RASL10AQ92737 203 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 CHCHD5Q9BSY4 110 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 G3V318 75 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 WFDC12Q8WWY7 111 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 ZNF479Q96JC4 524 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 ZNF491Q8N8L2 437 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 TRGV1A0A0A0MS02 117 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 LTAP01374 205 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 DIAPH2-AS1Q14236 149 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 LENEPQ9Y5L5 61 aa8.33□□□□□ -1.08
NUP188-201ENST00000372577 RBAKDNA6NC62 111 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 CR1LQ2VPA4 569 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 TMEM141Q96I45 108 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 YLPM1P49750 1951 aaKnown RBP8.32□□□□□ -1.08
NUP188-201ENST00000372577 TRAV2A0A0B4J234 112 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 TMEM86BQ8N661 226 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 C8orf49Q96NF6 230 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 A0A1W2PNU3 283 aaPredicted RBP8.32□□□□□ -1.08
NUP188-201ENST00000372577 DMRTC2Q8IXT2 367 aaPredicted RBP8.32□□□□□ -1.08
NUP188-201ENST00000372577 ZNF664Q8N3J9 261 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 C11orf44Q8N8P7 122 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 WIPF2Q8TF74 440 aaPredicted RBP8.32□□□□□ -1.08
NUP188-201ENST00000372577 HTN3P15516 51 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 SAMD5Q5TGI4 173 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 PRO3102Q9H379 93 aa8.32□□□□□ -1.08
NUP188-201ENST00000372577 DENND4AQ7Z401 1863 aa8.31□□□□□ -1.08
NUP188-201ENST00000372577 A0A1B0GV72 72 aa8.31□□□□□ -1.08
NUP188-201ENST00000372577 CRPP02741 224 aa8.31□□□□□ -1.08
NUP188-201ENST00000372577 DEFB131AP59861 70 aa8.31□□□□□ -1.08
NUP188-201ENST00000372577 FBXL19-AS1Q494R0 122 aa8.31□□□□□ -1.08
NUP188-201ENST00000372577 IGFBPL1Q8WX77 278 aa8.31□□□□□ -1.08
NUP188-201ENST00000372577 FNDC4Q9H6D8 234 aaPredicted RBP8.31□□□□□ -1.08
NUP188-201ENST00000372577 SPTBN2O15020 2390 aa8.31□□□□□ -1.08
NUP188-201ENST00000372577 ERG28Q9UKR5 140 aa8.31□□□□□ -1.08
NUP188-201ENST00000372577 IGHV7-4-1A0A0J9YVY3 117 aa8.31□□□□□ -1.08
NUP188-201ENST00000372577 hDV102S1A0JD36 115 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms