RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 SPG11Q96JI7 2443 aa7.88□□□□□ -1.15
SCAF11-202ENST00000369367 CENPVL3A0A0U1RRI6 287 aa7.88□□□□□ -1.15
SCAF11-202ENST00000369367 CHTOPQ9Y3Y2 248 aaKnown RBP7.88□□□□□ -1.15
SCAF11-202ENST00000369367 ZNF503-AS2A6NEH8 195 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 SPAG8Q99932 426 aaPredicted RBP7.87□□□□□ -1.15
SCAF11-202ENST00000369367 IGHV1OR15-1A0A075B7D0 117 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 IGHV3-53P01767 116 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 JPT2Q9H910 190 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 IGLV3-1P01715 115 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 RNF152Q8N8N0 203 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 TMEM14CQ9P0S9 112 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 K7ERU9 68 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 C6orf226Q5I0X4 101 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 Q8NFD4 153 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 GFRA4Q9GZZ7 299 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 TRBV25-1A0A075B6N4 114 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 NDUFA3O95167 84 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 FOXI2Q6ZQN5 318 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 LIME1Q9H400 295 aa7.87□□□□□ -1.15
SCAF11-202ENST00000369367 NDUFS7O75251 213 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 LHBP01229 141 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 LINC00158P58513 81 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 IFITM2Q01629 132 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 RPP25LQ8N5L8 163 aaKnown RBP7.86□□□□□ -1.15
SCAF11-202ENST00000369367 MRPL16Q9NX20 251 aaKnown RBP7.86□□□□□ -1.15
SCAF11-202ENST00000369367 MYCNOSP40205 109 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 INSL3P51460 131 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 MS4A6AQ9H2W1 248 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 IGKV1-6A0A0C4DH72 117 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 CLPSL1A2RUU4 121 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 LYZL1Q6UWQ5 148 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 ANAPC10Q9UM13 185 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 FAM231BA6NCW3 169 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 WFDC1Q9HC57 220 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 SHANK1Q9Y566 2161 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 TMEM238C9JI98 176 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 C8orf86Q6ZUL3 223 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 SH2D6Q7Z4S9 175 aa7.86□□□□□ -1.15
SCAF11-202ENST00000369367 PFN1P07737 140 aaKnown RBP7.85□□□□□ -1.15
SCAF11-202ENST00000369367 AZU1P20160 251 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 IFI27L1Q96BM0 104 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 ADAMTS9Q9P2N4 1935 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 PTPN13Q12923 2485 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 HOXD3P31249 432 aaPredicted RBP7.85□□□□□ -1.15
SCAF11-202ENST00000369367 SRSF4Q08170 494 aaKnown RBP7.85□□□□□ -1.15
SCAF11-202ENST00000369367 SPINK13Q1W4C9 94 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 Q86TA4 180 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 TMEM170AQ8WVE7 144 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 PGPEP1Q9NXJ5 209 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 ZNF561-AS1K7EIQ3 104 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 PHLDA1Q8WV24 401 aaPredicted RBP7.85□□□□□ -1.15
SCAF11-202ENST00000369367 C1orf159Q96HA4 380 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 CST9LQ9H4G1 147 aa7.85□□□□□ -1.15
SCAF11-202ENST00000369367 Q8TAT8 98 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 IGKV3D-20A0A0C4DH25 116 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 ZNF815PA8K554 130 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 RSPO1Q2MKA7 263 aaPredicted RBP7.84□□□□□ -1.15
SCAF11-202ENST00000369367 Q8NA96 180 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 CTSZQ9UBR2 303 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 A8MXK9 166 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 TRBV19A0A075B6N1 114 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 IGHV3-73A0A0B4J1V6 119 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 TRAV25A0A0B4J276 109 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 RIPPLY3P57055 190 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 NPBQ8NG41 125 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 MRPL53Q96EL3 112 aaKnown RBP7.84□□□□□ -1.15
SCAF11-202ENST00000369367 ZNF492Q9P255 531 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 LENEPQ9Y5L5 61 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 IGKCP01834 107 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 ARMS2P0C7Q2 107 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 LYL1P12980 280 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 C14orf178Q8N769 122 aaPredicted RBP7.84□□□□□ -1.15
SCAF11-202ENST00000369367 LY6G5BQ8NDX9 201 aa7.84□□□□□ -1.15
SCAF11-202ENST00000369367 MED13Q9UHV7 2174 aa7.84□□□□□ -1.16
SCAF11-202ENST00000369367 A0A1W2PNU3 283 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-202ENST00000369367 H3BRN7 92 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 CT83Q5H943 113 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 RNF144BQ7Z419 303 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 F8WEM9 126 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 EVI2AP22794 236 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 GP9P14770 177 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 TYMSP04818 313 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 DUX4L9Q6RFH8 374 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-202ENST00000369367 ZNF493Q6ZR52 646 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 PYGO2Q9BRQ0 406 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 CSTL1Q9H114 145 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 C1orf147Q96MC9 270 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-202ENST00000369367 ZNRD1Q9P1U0 126 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 VWC2Q2TAL6 325 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 THAP8Q8NA92 274 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 SSBP4Q9BWG4 385 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-202ENST00000369367 VSIRQ9H7M9 311 aa7.83□□□□□ -1.16
SCAF11-202ENST00000369367 Q6ZRM9 215 aa7.82□□□□□ -1.16
SCAF11-202ENST00000369367 VOPP1Q96AW1 172 aa7.82□□□□□ -1.16
SCAF11-202ENST00000369367 LSM4Q9Y4Z0 139 aaKnown RBP7.82□□□□□ -1.16
SCAF11-202ENST00000369367 LOC102724200A0A096LPH7 203 aaPredicted RBP7.82□□□□□ -1.16
SCAF11-202ENST00000369367 ARL6IP6Q8N6S5 226 aa7.82□□□□□ -1.16
SCAF11-202ENST00000369367 DENND4CQ5VZ89 1909 aa7.82□□□□□ -1.16
SCAF11-202ENST00000369367 MYMXA0A1B0GTQ4 84 aa7.82□□□□□ -1.16
SCAF11-202ENST00000369367 CDK2AP2O75956 126 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms