RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TCTEX1D4Q5JR98 221 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 LIME1Q9H400 295 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 PSCAO43653 123 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 LINC00311Q8N616 119 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 FNDC10F2Z333 226 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 IGHV2-5P01817 119 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 CXCL1P09341 107 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 CFPP27918 469 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 CFHR3Q02985 330 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 NUP35Q8NFH5 326 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 NRGNQ92686 78 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 C1orf159Q96HA4 380 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 DKK4Q9UBT3 224 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 YPEL3P61236 119 aaPredicted RBP14.87□□□□□ -0.03
CLIP2-202ENST00000361545 DEFB112Q30KQ8 113 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 CTSZQ9UBR2 303 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 LINC00158P58513 81 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 CKS1BP61024 79 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 OR5A1Q8NGJ0 315 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 TMEM190Q8WZ59 177 aa14.87□□□□□ -0.03
CLIP2-202ENST00000361545 Q86TA4 180 aa14.86□□□□□ -0.03
CLIP2-202ENST00000361545 IGKCP01834 107 aa14.86□□□□□ -0.03
CLIP2-202ENST00000361545 WT1-ASQ06250 92 aa14.86□□□□□ -0.03
CLIP2-202ENST00000361545 IGFBPL1Q8WX77 278 aa14.86□□□□□ -0.03
CLIP2-202ENST00000361545 IGHV4-59P01825 116 aa14.86□□□□□ -0.03
CLIP2-202ENST00000361545 TYMSP04818 313 aa14.86□□□□□ -0.03
CLIP2-202ENST00000361545 KAAG1Q9UBP8 84 aa14.86□□□□□ -0.03
CLIP2-202ENST00000361545 ZNF815PA8K554 130 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 SPRNQ5BIV9 151 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 CHCHD1Q96BP2 118 aaKnown RBP14.85□□□□□ -0.03
CLIP2-202ENST00000361545 CSTL1Q9H114 145 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 KLK9Q9UKQ9 250 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 ARMS2P0C7Q2 107 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 DEFB113Q30KQ7 82 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 IGHV4-61A0A0C4DH41 118 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 SMKR1H3BMG3 65 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 IGKV1-39P01597 117 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 IGKV1D-39P04432 117 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 PDE6HQ13956 83 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 CACNA1AO00555 2505 aa14.85□□□□□ -0.03
CLIP2-202ENST00000361545 IGHV2-70P01814 119 aa14.84□□□□□ -0.03
CLIP2-202ENST00000361545 MST1LQ2TV78 715 aa14.84□□□□□ -0.03
CLIP2-202ENST00000361545 ATRXP46100 2492 aa14.84□□□□□ -0.03
CLIP2-202ENST00000361545 IGHV4-30-2A0A087WSY4 118 aa14.83□□□□□ -0.03
CLIP2-202ENST00000361545 A0A1B0GWB2 263 aa14.83□□□□□ -0.03
CLIP2-202ENST00000361545 COLCA2A8K830 154 aa14.83□□□□□ -0.03
CLIP2-202ENST00000361545 VCYO14598 125 aa14.83□□□□□ -0.03
CLIP2-202ENST00000361545 SPCS1Q9Y6A9 102 aa14.83□□□□□ -0.03
CLIP2-202ENST00000361545 TMEM242Q9NWH2 141 aa14.83□□□□□ -0.04
CLIP2-202ENST00000361545 F5H768 121 aa14.83□□□□□ -0.04
CLIP2-202ENST00000361545 ADORA2A-AS1P86434 159 aa14.83□□□□□ -0.04
CLIP2-202ENST00000361545 AMN1Q8IY45 258 aa14.83□□□□□ -0.04
CLIP2-202ENST00000361545 HIST1H2BLQ99880 126 aa14.83□□□□□ -0.04
CLIP2-202ENST00000361545 TRBV24-1A0A075B6N3 115 aa14.83□□□□□ -0.04
CLIP2-202ENST00000361545 SLC25A20O43772 301 aa14.83□□□□□ -0.04
CLIP2-202ENST00000361545 NDUFS6O75380 124 aaKnown RBP14.83□□□□□ -0.04
CLIP2-202ENST00000361545 HOXB4P17483 251 aaPredicted RBP14.83□□□□□ -0.04
CLIP2-202ENST00000361545 A0A1B0GW64 132 aa14.82□□□□□ -0.04
CLIP2-202ENST00000361545 OTOGLQ3ZCN5 2332 aa14.82□□□□□ -0.04
CLIP2-202ENST00000361545 TEX43Q6ZNM6 134 aa14.82□□□□□ -0.04
CLIP2-202ENST00000361545 NHP2Q9NX24 153 aaKnown RBP14.82□□□□□ -0.04
CLIP2-202ENST00000361545 LYL1P12980 280 aa14.82□□□□□ -0.04
CLIP2-202ENST00000361545 TRAV13-1A0A0B4J241 112 aa14.82□□□□□ -0.04
CLIP2-202ENST00000361545 NPC2P61916 151 aa14.82□□□□□ -0.04
CLIP2-202ENST00000361545 PGPEP1Q9NXJ5 209 aa14.82□□□□□ -0.04
CLIP2-202ENST00000361545 IGHV3-16A0A0C4DH30 117 aa14.81□□□□□ -0.04
CLIP2-202ENST00000361545 PLNP26678 52 aa14.81□□□□□ -0.04
CLIP2-202ENST00000361545 C8orf86Q6ZUL3 223 aa14.81□□□□□ -0.04
CLIP2-202ENST00000361545 TRAV12-2A0A075B6T6 113 aa14.81□□□□□ -0.04
CLIP2-202ENST00000361545 NDUFA4O00483 81 aa14.81□□□□□ -0.04
CLIP2-202ENST00000361545 TMEM86BQ8N661 226 aa14.81□□□□□ -0.04
CLIP2-202ENST00000361545 MS4A6AQ9H2W1 248 aa14.81□□□□□ -0.04
CLIP2-202ENST00000361545 C8orf49Q96NF6 230 aa14.81□□□□□ -0.04
CLIP2-202ENST00000361545 C11orf53Q8IXP5 236 aa14.81□□□□□ -0.04
CLIP2-202ENST00000361545 DAD1P61803 113 aa14.8□□□□□ -0.04
CLIP2-202ENST00000361545 MEGF9Q9H1U4 602 aa14.8□□□□□ -0.04
CLIP2-202ENST00000361545 KIF26AQ9ULI4 1882 aaPredicted RBP14.8□□□□□ -0.04
CLIP2-202ENST00000361545 MED13Q9UHV7 2174 aa14.8□□□□□ -0.04
CLIP2-202ENST00000361545 TRAV9-2A0A087WT02 112 aa14.8□□□□□ -0.04
CLIP2-202ENST00000361545 IGLV3-1P01715 115 aa14.8□□□□□ -0.04
CLIP2-202ENST00000361545 ANAPC10Q9UM13 185 aa14.8□□□□□ -0.04
CLIP2-202ENST00000361545 PAX9P55771 341 aa14.8□□□□□ -0.04
CLIP2-202ENST00000361545 VPREB3Q9UKI3 123 aa14.8□□□□□ -0.04
CLIP2-202ENST00000361545 LY96Q9Y6Y9 160 aa14.79□□□□□ -0.04
CLIP2-202ENST00000361545 HIST3H2BBQ8N257 126 aa14.79□□□□□ -0.04
CLIP2-202ENST00000361545 TRBV19A0A075B6N1 114 aa14.79□□□□□ -0.04
CLIP2-202ENST00000361545 H3BUT2 72 aa14.79□□□□□ -0.04
CLIP2-202ENST00000361545 IGHV4-39P01824 125 aa14.79□□□□□ -0.04
CLIP2-202ENST00000361545 S100A7L2Q5SY68 101 aa14.79□□□□□ -0.04
CLIP2-202ENST00000361545 SSBP2P81877 361 aaPredicted RBP14.79□□□□□ -0.04
CLIP2-202ENST00000361545 DENND4CQ5VZ89 1909 aa14.79□□□□□ -0.04
CLIP2-202ENST00000361545 TMEM95Q3KNT9 176 aa14.78□□□□□ -0.04
CLIP2-202ENST00000361545 LINC01549A6NIU2 74 aa14.78□□□□□ -0.04
CLIP2-202ENST00000361545 ELANEP08246 267 aa14.78□□□□□ -0.04
CLIP2-202ENST00000361545 MORN3Q6PF18 240 aaPredicted RBP14.78□□□□□ -0.04
CLIP2-202ENST00000361545 GAGE12JA6NER3 117 aa14.78□□□□□ -0.04
CLIP2-202ENST00000361545 GAGE1Q13065 139 aa14.78□□□□□ -0.04
CLIP2-202ENST00000361545 GAGE4Q13068 117 aa14.78□□□□□ -0.04
CLIP2-202ENST00000361545 GAGE5Q13069 117 aa14.78□□□□□ -0.04
CLIP2-202ENST00000361545 GAGE13Q4V321 117 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms