RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CLEC19AQ6UXS0 136 aa12.84□□□□□ -0.35
CLSTN1-201ENST00000361311 EML6Q6ZMW3 1958 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 PRSS46E5RG02 174 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 PF4V1P10720 104 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 ERG28Q9UKR5 140 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 B9A039 149 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 MORN5Q5VZ52 161 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 MDS2Q8NDY4 140 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 C8orf49Q96NF6 230 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 TRBV19A0A075B6N1 114 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 LTAP01374 205 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 SSBP2P81877 361 aaPredicted RBP12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 NPFFR1Q9GZQ6 430 aa12.83□□□□□ -0.36
CLSTN1-201ENST00000361311 TRAV8-4A0A0B4J246 113 aa12.82□□□□□ -0.36
CLSTN1-201ENST00000361311 NPYP01303 97 aa12.82□□□□□ -0.36
CLSTN1-201ENST00000361311 IGHV1-3A0A0C4DH29 117 aa12.82□□□□□ -0.36
CLSTN1-201ENST00000361311 NDUFS7O75251 213 aa12.82□□□□□ -0.36
CLSTN1-201ENST00000361311 DUX4L9Q6RFH8 374 aaPredicted RBP12.82□□□□□ -0.36
CLSTN1-201ENST00000361311 MED12LQ86YW9 2145 aa12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 RNFT1Q5M7Z0 435 aa12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 UBTD1Q9HAC8 227 aa12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 APOBEC3AP31941 199 aaPredicted RBP12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 KLRB1Q12918 225 aa12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 PCDH15Q96QU1 1955 aa12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 ZGRF1Q86YA3 2104 aa12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 CEND1Q8N111 149 aa12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 PDE6HQ13956 83 aa12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 FAM120AOSQ5T036 256 aa12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 C11orf53Q8IXP5 236 aa12.81□□□□□ -0.36
CLSTN1-201ENST00000361311 P0C879 139 aa12.8□□□□□ -0.36
CLSTN1-201ENST00000361311 RNASE4P34096 147 aaKnown RBP12.8□□□□□ -0.36
CLSTN1-201ENST00000361311 THAP8Q8NA92 274 aa12.8□□□□□ -0.36
CLSTN1-201ENST00000361311 CRXO43186 299 aaPredicted RBP12.8□□□□□ -0.36
CLSTN1-201ENST00000361311 MRPL35Q9NZE8 188 aaKnown RBP12.8□□□□□ -0.36
CLSTN1-201ENST00000361311 PRR14LQ5THK1 2151 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 TRAV21A0A0B4J279 112 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 LINC01549A6NIU2 74 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 WFDC12Q8WWY7 111 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 FAM167A-AS1Q96KT0 104 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 TP73-AS1Q9UF72 201 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 PIEZO1Q92508 2521 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 SCGB1A1P11684 91 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 IGKV3-20P01619 116 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 ZNF833PQ6ZTB9 187 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 PPDPFLQ8WWR9 84 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 RNF114Q9Y508 228 aa12.79□□□□□ -0.36
CLSTN1-201ENST00000361311 IGKV1OR2-108A0A075B7D4 117 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 LYNX1G3V0Z9 82 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 G3V4G9 280 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 CEACAM4O75871 244 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 LYNX1P0DP58 116 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 TMEM95Q3KNT9 176 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 MEIG1Q5JSS6 88 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 LY6G6EA0A0G2JKS1 128 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 TMEM178BH3BS89 294 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 TMEM155Q4W5P6 130 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 Q8TCH9 128 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 GTSF1Q8WW33 167 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 U3KQA8 63 aa12.78□□□□□ -0.36
CLSTN1-201ENST00000361311 C9JAW5 83 aa12.77□□□□□ -0.36
CLSTN1-201ENST00000361311 C12orf74Q32Q52 190 aa12.77□□□□□ -0.36
CLSTN1-201ENST00000361311 RNASE6Q93091 150 aaKnown RBP12.77□□□□□ -0.36
CLSTN1-201ENST00000361311 CCL21O00585 134 aa12.77□□□□□ -0.36
CLSTN1-201ENST00000361311 TPSG1Q9NRR2 321 aa12.77□□□□□ -0.36
CLSTN1-201ENST00000361311 TRGV3P03979 118 aa12.77□□□□□ -0.37
CLSTN1-201ENST00000361311 Q8N8P6 123 aa12.77□□□□□ -0.37
CLSTN1-201ENST00000361311 GLMPQ8WWB7 406 aa12.77□□□□□ -0.37
CLSTN1-201ENST00000361311 TMEM14CQ9P0S9 112 aa12.77□□□□□ -0.37
CLSTN1-201ENST00000361311 PLXNB1O43157 2135 aa12.77□□□□□ -0.37
CLSTN1-201ENST00000361311 PATE2Q6UY27 113 aa12.77□□□□□ -0.37
CLSTN1-201ENST00000361311 PCNX2A6NKB5 2137 aa12.76□□□□□ -0.37
CLSTN1-201ENST00000361311 IGHV3-64A0A075B6Q5 118 aa12.76□□□□□ -0.37
CLSTN1-201ENST00000361311 DEFB104AQ8WTQ1 72 aa12.76□□□□□ -0.37
CLSTN1-201ENST00000361311 TAL2Q16559 108 aa12.76□□□□□ -0.37
CLSTN1-201ENST00000361311 NEU4Q8WWR8 484 aaPredicted RBP12.76□□□□□ -0.37
CLSTN1-201ENST00000361311 RAX2Q96IS3 184 aa12.76□□□□□ -0.37
CLSTN1-201ENST00000361311 ZNF48Q96MX3 618 aaPredicted RBP12.76□□□□□ -0.37
CLSTN1-201ENST00000361311 PRR25Q96S07 402 aa12.76□□□□□ -0.37
CLSTN1-201ENST00000361311 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.76□□□□□ -0.371e-8■■■□□ 16.4
CLSTN1-201ENST00000361311 WDR87Q6ZQQ6 2873 aa12.76□□□□□ -0.37
CLSTN1-201ENST00000361311 TMEM131Q92545 1883 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 TRBV25-1A0A075B6N4 114 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 PAX1P15863 534 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 RNF5Q99942 180 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 CNTFRP26992 372 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 LYPD2Q6UXB3 125 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 COPS9Q8WXC6 57 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 NOTCH2Q04721 2471 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 IGLV2-8P01709 118 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 BRWD1-AS2P59051 145 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 ERCC8Q13216 396 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 SPATA12Q7Z6I5 190 aa12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 C14orf178Q8N769 122 aaPredicted RBP12.75□□□□□ -0.37
CLSTN1-201ENST00000361311 WFDC2Q14508 124 aa12.74□□□□□ -0.37
CLSTN1-201ENST00000361311 C1orf122Q6ZSJ8 110 aa12.74□□□□□ -0.37
CLSTN1-201ENST00000361311 MYMXA0A1B0GTQ4 84 aa12.74□□□□□ -0.37
CLSTN1-201ENST00000361311 DNAL4O96015 105 aa12.74□□□□□ -0.37
CLSTN1-201ENST00000361311 FXYD2P54710 66 aa12.74□□□□□ -0.37
CLSTN1-201ENST00000361311 BOD1L2Q8IYS8 172 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms