RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 DDTP30046 118 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 MST1LQ2TV78 715 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 FAM90A2PQ658T7 463 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 OR11H1Q8NG94 326 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 OR11H2Q8NH07 326 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 SCGB3A1Q96QR1 104 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 TMEM14CQ9P0S9 112 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 CLPSL1A2RUU4 121 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.61□□□□□ -1.51
RAB5B-201ENST00000360299 ATP6V0E1O15342 81 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 LINC00614P0C842 121 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 RIPPLY3P57055 190 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 RPL15P61313 204 aaKnown RBP5.61□□□□□ -1.51
RAB5B-201ENST00000360299 SRSF1Q07955 248 aaKnown RBP eCLIP5.61□□□□□ -1.51
RAB5B-201ENST00000360299 EXOC3-AS1Q8N2X6 119 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 THAP8Q8NA92 274 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 GFRA4Q9GZZ7 299 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 ST20Q9HBF5 79 aa5.61□□□□□ -1.51
RAB5B-201ENST00000360299 SHANK1Q9Y566 2161 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 LOC400499M0QZD8 3231 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 C22orf46C9J442 243 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 RHPN1-AS1Q9BWJ2 59 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 CTSZQ9UBR2 303 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 TSSC4Q9Y5U2 329 aaPredicted RBP5.6□□□□□ -1.51
RAB5B-201ENST00000360299 ABCA12Q86UK0 2595 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST1H2BKO60814 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST1H2BJP06899 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST1H2BOP23527 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST1H2BBP33778 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST1H2BDP58876 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST1H2BCP62807 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 MLANAQ16655 118 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST2H2BEQ16778 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.6□□□□□ -1.51
RAB5B-201ENST00000360299 SHISA2Q6UWI4 295 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 TCF23Q7RTU1 214 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST1H2BHQ93079 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST1H2BNQ99877 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HIST1H2BMQ99879 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 C2orf88Q9BSF0 95 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 C1QTNF4Q9BXJ3 329 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 ZNF492Q9P255 531 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 PGPEP1LA6NFU8 196 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 WT1-ASQ06250 92 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 CT83Q5H943 113 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 NDUFA4O00483 81 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 HBDP02042 147 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 AMBPP02760 352 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 RNF224P0DH78 156 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 ADMP35318 185 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 SYNJ2BPP57105 145 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 BCL6BQ8N143 479 aaPredicted RBP5.6□□□□□ -1.51
RAB5B-201ENST00000360299 VPS25Q9BRG1 176 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 NRN1Q9NPD7 142 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 ZNRD1Q9P1U0 126 aa5.6□□□□□ -1.51
RAB5B-201ENST00000360299 C5orf52A6NGY3 159 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 SERF1AO75920 110 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 ELANEP08246 267 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 TTC9CQ8N5M4 171 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 EXPH5Q8NEV8 1989 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 NCOA6Q14686 2063 aaPredicted RBP5.59□□□□□ -1.51
RAB5B-201ENST00000360299 TRGV2A0A075B6R0 118 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 UBE2CO00762 179 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 CYYR1Q96J86 154 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 ALKBH7Q9BT30 221 aaPredicted RBP5.59□□□□□ -1.51
RAB5B-201ENST00000360299 LINC01619G3V211 115 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 H3BRM9 83 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 TMEM95Q3KNT9 176 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 MUC21Q5SSG8 566 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 TMEM75Q8N9X5 138 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 KLK15Q9H2R5 256 aa5.59□□□□□ -1.51
RAB5B-201ENST00000360299 IGKV2-40A0A087WW87 121 aaPredicted RBP5.59□□□□□ -1.52
RAB5B-201ENST00000360299 C7orf71A4D174 169 aa5.59□□□□□ -1.52
RAB5B-201ENST00000360299 FSTL3O95633 263 aa5.59□□□□□ -1.52
RAB5B-201ENST00000360299 IGKV2D-40P01614 121 aaPredicted RBP5.59□□□□□ -1.52
RAB5B-201ENST00000360299 COTL1Q14019 142 aa5.59□□□□□ -1.52
RAB5B-201ENST00000360299 VWC2Q2TAL6 325 aa5.59□□□□□ -1.52
RAB5B-201ENST00000360299 RAB37Q96AX2 223 aa5.59□□□□□ -1.52
RAB5B-201ENST00000360299 LAMTOR2Q9Y2Q5 125 aa5.59□□□□□ -1.52
RAB5B-201ENST00000360299 SMPXQ9UHP9 88 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 CYSLTR1Q9Y271 337 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 TRBV19A0A075B6N1 114 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 SRRM4A7MD48 611 aaKnown RBP5.58□□□□□ -1.52
RAB5B-201ENST00000360299 CNTFRP26992 372 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 DERL1Q9BUN8 251 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 JKAMPQ9P055 326 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 NOTCH3Q9UM47 2321 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 PRR20EP86478 221 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 PRR20CP86479 221 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 PRR20DP86480 221 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 PRR20BP86481 221 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 PRR20AP86496 221 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 FBLN7Q53RD9 439 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 Q86TA4 180 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 GLMPQ8WWB7 406 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 HIST1H4GQ99525 98 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 FREM1Q5H8C1 2179 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 IGLC1P0CG04 106 aa5.58□□□□□ -1.52
RAB5B-201ENST00000360299 HOXB4P17483 251 aaPredicted RBP5.58□□□□□ -1.52
RAB5B-201ENST00000360299 FAM231DQ6ZW35 169 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms