RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 UBE2G1P62253 170 aa17.56■□□□□ 0.4
SDF4-202ENST00000360001 FHL3Q13643 280 aa17.56■□□□□ 0.4
SDF4-202ENST00000360001 ARL6IP6Q8N6S5 226 aa17.56■□□□□ 0.4
SDF4-202ENST00000360001 FMC1Q96HJ9 113 aa17.56■□□□□ 0.4
SDF4-202ENST00000360001 SELENOKQ9Y6D0 94 aa17.56■□□□□ 0.4
SDF4-202ENST00000360001 TSPAN4O14817 238 aa17.55■□□□□ 0.4
SDF4-202ENST00000360001 IGLV2-11P01706 119 aa17.55■□□□□ 0.4
SDF4-202ENST00000360001 S100A9P06702 114 aaKnown RBP17.55■□□□□ 0.4
SDF4-202ENST00000360001 KRTAP10-3P60369 221 aa17.55■□□□□ 0.4
SDF4-202ENST00000360001 RNF212Q495C1 297 aa17.55■□□□□ 0.4
SDF4-202ENST00000360001 RNF182Q8N6D2 247 aa17.55■□□□□ 0.4
SDF4-202ENST00000360001 DLX4Q92988 240 aaPredicted RBP17.55■□□□□ 0.4
SDF4-202ENST00000360001 TRAV8-1A0A0A6YYK1 113 aa17.55■□□□□ 0.4
SDF4-202ENST00000360001 CSN1S1P47710 185 aa17.55■□□□□ 0.4
SDF4-202ENST00000360001 TCF24Q7RTU0 167 aa17.55■□□□□ 0.4
SDF4-202ENST00000360001 SOCS3O14543 225 aa17.54■□□□□ 0.4
SDF4-202ENST00000360001 ADAMTSL5Q6ZMM2 481 aa17.54■□□□□ 0.4
SDF4-202ENST00000360001 BAGE2Q86Y30 109 aa17.54■□□□□ 0.4
SDF4-202ENST00000360001 NRN1Q9NPD7 142 aa17.54■□□□□ 0.4
SDF4-202ENST00000360001 ADARB2-AS1A8MUL3 147 aa17.53■□□□□ 0.4
SDF4-202ENST00000360001 ZNF705FA8MVS1 300 aaPredicted RBP17.53■□□□□ 0.4
SDF4-202ENST00000360001 CCL24O00175 119 aa17.53■□□□□ 0.4
SDF4-202ENST00000360001 FOLR2P14207 255 aa17.53■□□□□ 0.4
SDF4-202ENST00000360001 RPL11P62913 178 aaKnown RBP17.53■□□□□ 0.4
SDF4-202ENST00000360001 LCN12Q6JVE5 192 aa17.53■□□□□ 0.4
SDF4-202ENST00000360001 OR9G4Q8NGQ1 327 aa17.53■□□□□ 0.4
SDF4-202ENST00000360001 SMCO4Q9NRQ5 59 aa17.53■□□□□ 0.4
SDF4-202ENST00000360001 TMEM75Q8N9X5 138 aa17.53■□□□□ 0.4
SDF4-202ENST00000360001 C16orf92Q96LL3 132 aa17.53■□□□□ 0.4
SDF4-202ENST00000360001 PRELID1Q9Y255 219 aa17.53■□□□□ 0.4
SDF4-202ENST00000360001 TEP1Q99973 2627 aaKnown RBP17.53■□□□□ 0.4
SDF4-202ENST00000360001 JMJD1CQ15652 2540 aa17.52■□□□□ 0.4
SDF4-202ENST00000360001 A0A1B0GUS0 222 aa17.52■□□□□ 0.4
SDF4-202ENST00000360001 LTAP01374 205 aa17.52■□□□□ 0.4
SDF4-202ENST00000360001 MT-ND4LP03901 98 aa17.52■□□□□ 0.4
SDF4-202ENST00000360001 Q86TA4 180 aa17.52■□□□□ 0.4
SDF4-202ENST00000360001 NHLRC2Q8NBF2 726 aa17.52■□□□□ 0.4
SDF4-202ENST00000360001 TRBV6-1A0A0K0K1D8 114 aa17.51■□□□□ 0.39
SDF4-202ENST00000360001 SERTM2A0A1B0GWG4 89 aa17.51■□□□□ 0.39
SDF4-202ENST00000360001 K7EQM0 130 aa17.51■□□□□ 0.39
SDF4-202ENST00000360001 PSG3Q16557 428 aa17.51■□□□□ 0.39
SDF4-202ENST00000360001 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.51■□□□□ 0.39
SDF4-202ENST00000360001 PEMTQ9UBM1 199 aa17.51■□□□□ 0.39
SDF4-202ENST00000360001 MLXQ9UH92 298 aa17.51■□□□□ 0.39
SDF4-202ENST00000360001 IGKV3-7A0A075B6H7 116 aa17.51■□□□□ 0.39
SDF4-202ENST00000360001 IGKV2-40A0A087WW87 121 aaPredicted RBP17.51■□□□□ 0.39
SDF4-202ENST00000360001 IGKV2D-40P01614 121 aaPredicted RBP17.51■□□□□ 0.39
SDF4-202ENST00000360001 OR5I1Q13606 314 aa17.51■□□□□ 0.39
SDF4-202ENST00000360001 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.51■□□□□ 0.39
SDF4-202ENST00000360001 MRPL53Q96EL3 112 aaKnown RBP17.51■□□□□ 0.39
SDF4-202ENST00000360001 CTDSP1Q9GZU7 261 aa17.51■□□□□ 0.39
SDF4-202ENST00000360001 TMEM242Q9NWH2 141 aa17.51■□□□□ 0.39
SDF4-202ENST00000360001 PRAC2D3DTV9 90 aa17.5■□□□□ 0.39
SDF4-202ENST00000360001 GCGP01275 180 aa17.5■□□□□ 0.39
SDF4-202ENST00000360001 SFRP2Q96HF1 295 aa17.5■□□□□ 0.39
SDF4-202ENST00000360001 MLST8Q9BVC4 326 aa17.5■□□□□ 0.39
SDF4-202ENST00000360001 CLEC5AQ9NY25 188 aa17.5■□□□□ 0.39
SDF4-202ENST00000360001 FLI1Q01543 452 aaPredicted RBP17.49■□□□□ 0.39
SDF4-202ENST00000360001 C20orf173Q96LM9 149 aa17.49■□□□□ 0.39
SDF4-202ENST00000360001 TUBA4BQ9H853 241 aa17.49■□□□□ 0.39
SDF4-202ENST00000360001 MGST1P10620 155 aaKnown RBP17.49■□□□□ 0.39
SDF4-202ENST00000360001 PRNTQ86SH4 94 aa17.49■□□□□ 0.39
SDF4-202ENST00000360001 SMIM12Q96EX1 92 aa17.49■□□□□ 0.39
SDF4-202ENST00000360001 PSG8Q9UQ74 426 aa17.49■□□□□ 0.39
SDF4-202ENST00000360001 M0QZ24 198 aa17.48■□□□□ 0.39
SDF4-202ENST00000360001 CSN3P07498 182 aa17.48■□□□□ 0.39
SDF4-202ENST00000360001 ANAPC16Q96DE5 110 aa17.48■□□□□ 0.39
SDF4-202ENST00000360001 GBGT1Q8N5D6 347 aa17.48■□□□□ 0.39
SDF4-202ENST00000360001 DCANP1Q8TF63 244 aa17.48■□□□□ 0.39
SDF4-202ENST00000360001 NSUN5P1Q3KNT7 163 aa17.47■□□□□ 0.39
SDF4-202ENST00000360001 VGLL1Q99990 258 aa17.47■□□□□ 0.39
SDF4-202ENST00000360001 MS4A6AQ9H2W1 248 aa17.47■□□□□ 0.39
SDF4-202ENST00000360001 CXorf65A6NEN9 183 aa17.46■□□□□ 0.39
SDF4-202ENST00000360001 H7BYZ3 331 aa17.46■□□□□ 0.39
SDF4-202ENST00000360001 NDUFA11Q86Y39 141 aa17.46■□□□□ 0.39
SDF4-202ENST00000360001 MAST4O15021 2626 aa17.46■□□□□ 0.39
SDF4-202ENST00000360001 FOXL1Q12952 345 aa17.46■□□□□ 0.39
SDF4-202ENST00000360001 TMEM183AQ8IXX5 376 aa17.46■□□□□ 0.39
SDF4-202ENST00000360001 ASCL2Q99929 193 aa17.46■□□□□ 0.39
SDF4-202ENST00000360001 ZFP30Q9Y2G7 519 aa17.46■□□□□ 0.39
SDF4-202ENST00000360001 WNK1Q9H4A3 2382 aa17.45■□□□□ 0.38
SDF4-202ENST00000360001 RBAKDNA6NC62 111 aa17.45■□□□□ 0.38
SDF4-202ENST00000360001 OR10G8Q8NGN5 311 aa17.45■□□□□ 0.38
SDF4-202ENST00000360001 YPEL4Q96NS1 127 aa17.45■□□□□ 0.38
SDF4-202ENST00000360001 RNASE7Q9H1E1 156 aaKnown RBP17.45■□□□□ 0.38
SDF4-202ENST00000360001 PPP1R2P9O14990 202 aa17.44■□□□□ 0.38
SDF4-202ENST00000360001 ERVFC1-1P60608 527 aa17.44■□□□□ 0.38
SDF4-202ENST00000360001 SAMD13Q5VXD3 122 aa17.44■□□□□ 0.38
SDF4-202ENST00000360001 FBLL1A6NHQ2 334 aaKnown RBP17.44■□□□□ 0.38
SDF4-202ENST00000360001 WFDC3Q8IUB2 231 aa17.44■□□□□ 0.38
SDF4-202ENST00000360001 ZNF738Q8NE65 137 aa17.44■□□□□ 0.38
SDF4-202ENST00000360001 COLCA2A8K830 154 aa17.43■□□□□ 0.38
SDF4-202ENST00000360001 ERCC8Q13216 396 aa17.43■□□□□ 0.38
SDF4-202ENST00000360001 OSTCQ9NRP0 149 aa17.43■□□□□ 0.38
SDF4-202ENST00000360001 URGCP-MRPS24S4R325 110 aa17.43■□□□□ 0.38
SDF4-202ENST00000360001 OVOL1O14753 267 aa17.42■□□□□ 0.38
SDF4-202ENST00000360001 PRR27Q6MZM9 219 aa17.42■□□□□ 0.38
SDF4-202ENST00000360001 C15orf54Q8N8G6 183 aa17.42■□□□□ 0.38
SDF4-202ENST00000360001 K7EQG2 157 aa17.42■□□□□ 0.38
SDF4-202ENST00000360001 TFPI2P48307 235 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 372.3 ms